RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSGAFG00000001577 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
tRNA methyltransferase 13 homolog |
Status |
Confidence |
Length |
5159 bases |
Strand |
Plus strand |
Position |
NHOQ01002037.1 : 100434 - 105592 |
RNA binding domain |
TRM13 , zf-TRM13_CCCH , zf-U11-48K |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSGAFP00000002347 |
TRM13 |
PF05206 |
6.3e-62 |
1 |
ENSGAFP00000002347 |
zf-TRM13_CCCH |
PF11722 |
3.1e-12 |
2 |
ENSGAFP00000002347 |
zf-U11-48K |
PF05253 |
5.6e-10 |
3 |
ENSGAFP00000002303 |
TRM13 |
PF05206 |
9.1e-23 |
1 |
ENSGAFP00000002303 |
zf-TRM13_CCCH |
PF11722 |
1.1e-12 |
2 |
ENSGAFP00000002303 |
zf-U11-48K |
PF05253 |
3.3e-10 |
3 |
ENSGAFP00000002361 |
zf-TRM13_CCCH |
PF11722 |
4.4e-13 |
1 |
ENSGAFP00000002361 |
zf-U11-48K |
PF05253 |
2.3e-10 |
2 |
ENSGAFP00000002385 |
zf-U11-48K |
PF05253 |
1.7e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSGAFT00000002328 |
897 |
298aa |
ENSGAFP00000002303 |
- |
ENSGAFT00000002372 |
1307 |
435aa |
ENSGAFP00000002347 |
- |
ENSGAFT00000002386 |
435 |
144aa |
ENSGAFP00000002361 |
- |
ENSGAFT00000002410 |
459 |
152aa |
ENSGAFP00000002385 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSGAFG00000001577 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSGAFG00000001577 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |