Description

Ensembl ID ENSGAFG00000001577 Gene ID Accession -
Symbol Alias - Full Name tRNA methyltransferase 13 homolog
Status Confidence Length 5159 bases Strand Plus strand
Position NHOQ01002037.1 : 100434 - 105592 RNA binding domain TRM13 , zf-TRM13_CCCH , zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGAFP00000002347 TRM13 PF05206 6.3e-62 1
ENSGAFP00000002347 zf-TRM13_CCCH PF11722 3.1e-12 2
ENSGAFP00000002347 zf-U11-48K PF05253 5.6e-10 3
ENSGAFP00000002303 TRM13 PF05206 9.1e-23 1
ENSGAFP00000002303 zf-TRM13_CCCH PF11722 1.1e-12 2
ENSGAFP00000002303 zf-U11-48K PF05253 3.3e-10 3
ENSGAFP00000002361 zf-TRM13_CCCH PF11722 4.4e-13 1
ENSGAFP00000002361 zf-U11-48K PF05253 2.3e-10 2
ENSGAFP00000002385 zf-U11-48K PF05253 1.7e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSGAFT00000002328 897 298aa ENSGAFP00000002303
- ENSGAFT00000002372 1307 435aa ENSGAFP00000002347
- ENSGAFT00000002386 435 144aa ENSGAFP00000002361
- ENSGAFT00000002410 459 152aa ENSGAFP00000002385

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAFG00000001577

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAFG00000001577

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression