| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSGACG00000020709 | Gene ID |
|
Accession |
- |
| Symbol |
zgc |
Alias |
- |
Full Name |
zgc:163098 |
| Status |
Confidence |
Length |
8349 bases |
Strand |
Plus strand |
| Position |
groupVII : 22702632 - 22710980 |
RNA binding domain |
RRM_1 , Surp , cwf21 , CID |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSGACP00000027383 |
RRM_1 |
PF00076 |
3.1e-07 |
1 |
| ENSGACP00000027383 |
Surp |
PF01805 |
4e-16 |
2 |
| ENSGACP00000027383 |
cwf21 |
PF08312 |
2.6e-10 |
3 |
| ENSGACP00000027383 |
CID |
PF04818 |
3e-09 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| zgc:163098-201 |
ENSGACT00000027435 |
2880 |
929aa |
ENSGACP00000027383 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000004945 | 59.9794 | 46.2963 | gasterosteus_aculeatus | ENSGACP00000027383 | 62.7556 | 48.4392 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 77.9333 | 67.0614 | fundulus_heteroclitus | ENSFHEP00000029468 | 83.5063 | 71.857 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.4715 | 67.7072 | poecilia_reticulata | ENSPREP00000034057 | 82.8409 | 71.4773 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 75.8881 | 71.1518 | cyclopterus_lumpus | ENSCLMP00005027262 | 90.2689 | 84.6351 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 77.2874 | 68.4607 | oreochromis_niloticus | ENSONIP00000006612 | 78.2135 | 69.281 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.0409 | 68.4607 | oryzias_latipes | ENSORLP00000035930 | 84.2044 | 73.8676 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.4715 | 68.0301 | xiphophorus_maculatus | ENSXMAP00000012704 | 83.9862 | 72.8111 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.2702 | 73.7352 | haplochromis_burtoni | ENSHBUP00000020361 | 86.682 | 78.6452 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.0549 | 73.4123 | astatotilapia_calliptera | ENSACLP00000024533 | 86.4524 | 78.3008 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 82.1313 | 74.9193 | sparus_aurata | ENSSAUP00010064398 | 82.5758 | 75.3247 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 80.732 | 73.8428 | lates_calcarifer | ENSLCAP00010012856 | 88.1316 | 80.611 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 77.6103 | 66.7384 | cyprinodon_variegatus | ENSCVAP00000026639 | 83.1603 | 71.511 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 77.5027 | 70.0753 | neolamprologus_brichardi | ENSNBRP00000027847 | 85.7143 | 77.5 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 77.3951 | 68.5684 | oryzias_melastigma | ENSOMEP00000022550 | 83.4107 | 73.8979 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 84.8224 | 77.6103 | seriola_dumerili | ENSSDUP00000013672 | 88.5393 | 81.0112 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.6868 | 68.2454 | poecilia_formosa | ENSPFOP00000012080 | 84.2166 | 73.0415 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 83.9613 | 77.1798 | dicentrarchus_labrax | ENSDLAP00005003661 | 86.6667 | 79.6667 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.7944 | 68.4607 | poecilia_latipinna | ENSPLAP00000006168 | 84.3318 | 73.2719 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.2562 | 72.5511 | cottoperca_gobio | ENSCGOP00000046017 | 87.0659 | 80.7186 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 66.8461 | 58.7729 | labrus_bergylta | ENSLBEP00000003348 | 78.0151 | 68.593 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.0581 | 66.6308 | anabas_testudineus | ENSATEP00000023959 | 83.3939 | 75.0303 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 82.4543 | 74.1658 | stegastes_partitus | ENSSPAP00000001174 | 87.3432 | 78.5633 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.8084 | 73.197 | amphiprion_ocellaris | ENSAOCP00000004983 | 86.0702 | 77.0102 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 84.93 | 77.6103 | seriola_lalandi_dorsalis | ENSSLDP00000026238 | 88.8513 | 81.1937 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.69 | 63.8321 | nothobranchius_furzeri | ENSNFUP00015013575 | 81.5177 | 72.5826 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 26.3724 | 22.8202 | betta_splendens | ENSBSLP00000042407 | 81.6667 | 70.6667 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 79.1173 | 70.3983 | scophthalmus_maximus | ENSSMAP00000022102 | 82.8636 | 73.7317 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 31.0011 | 26.1572 | hippocampus_comes | ENSHCOP00000017777 | 74.036 | 62.4679 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.8084 | 73.3046 | acanthochromis_polyacanthus | ENSAPOP00000004005 | 86.0702 | 77.1234 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.0549 | 73.5199 | pundamilia_nyererei | ENSPNYP00000021869 | 86.4524 | 78.4156 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 32.2928 | 28.31 | larimichthys_crocea | ENSLCRP00005037017 | 82.6446 | 72.4518 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.916 | 73.197 | amphiprion_percula | ENSAPEP00000001887 | 86.1835 | 77.0102 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 78.902 | 68.3531 | cynoglossus_semilaevis | ENSCSEP00000031428 | 83.1066 | 71.9955 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.9817 | 63.9397 | oryzias_sinensis | ENSOSIP00000051947 | 84.0149 | 73.6059 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 65.3391 | 59.9569 | sander_lucioperca | ENSSLUP00000039540 | 82.138 | 75.3721 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 81.0549 | 73.4123 | maylandia_zebra | ENSMZEP00005022441 | 86.4524 | 78.3008 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 79.6555 | 71.5823 | mastacembelus_armatus | ENSMAMP00000025339 | 86.1467 | 77.4156 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.3358 | 64.3703 | amphilophus_citrinellus | ENSACIP00000015457 | 83.8951 | 74.6567 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 75.9957 | 66.6308 | kryptolebias_marmoratus | ENSKMAP00000013038 | 82.093 | 71.9767 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 45.5328 | 28.0947 | caenorhabditis_elegans | C07H6.4.1 | 45.3376 | 27.9743 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 52.5296 | 36.8138 | drosophila_melanogaster | FBpp0071455 | 50.9927 | 35.7367 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 53.7137 | 39.6125 | ciona_intestinalis | ENSCINP00000033725 | 57.8216 | 42.6419 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 45.9634 | 35.4144 | eptatretus_burgeri | ENSEBUP00000005144 | 51.7576 | 39.8788 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 52.8525 | 41.1195 | callorhinchus_milii | ENSCMIP00000017787 | 66.1725 | 51.4825 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 65.0161 | 51.9914 | latimeria_chalumnae | ENSLACP00000009563 | 63.3788 | 50.6821 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.6588 | 59.4187 | clupea_harengus | ENSCHAP00000057100 | 73.1311 | 59.805 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.69 | 58.4499 | lepisosteus_oculatus | ENSLOCP00000016774 | 70.1791 | 57.2181 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.5511 | 58.4499 | danio_rerio | ENSDARP00000101139 | 77.1167 | 62.1281 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.7976 | 57.9117 | carassius_auratus | ENSCARP00000049276 | 76.9319 | 62.0531 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 69.7524 | 55.9742 | carassius_auratus | ENSCARP00000023931 | 74.3972 | 59.7015 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 66.4155 | 54.0366 | astyanax_mexicanus | ENSAMXP00000005209 | 75.5202 | 61.4443 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 69.8601 | 56.62 | ictalurus_punctatus | ENSIPUP00000029131 | 74.8558 | 60.669 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 68.3531 | 54.8977 | electrophorus_electricus | ENSEEEP00000014477 | 75.1479 | 60.355 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.5199 | 62.7556 | esox_lucius | ENSELUP00000038141 | 76.8279 | 65.5793 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.9817 | 61.8945 | oncorhynchus_kisutch | ENSOKIP00005115643 | 74.3421 | 63.0482 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.1658 | 63.0786 | oncorhynchus_kisutch | ENSOKIP00005063636 | 71.9958 | 61.233 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.2734 | 63.1862 | oncorhynchus_mykiss | ENSOMYP00000027806 | 72.327 | 61.5304 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.4123 | 62.3251 | oncorhynchus_mykiss | ENSOMYP00000138303 | 71.4885 | 60.6918 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.7352 | 62.5404 | salmo_salar | ENSSSAP00000081304 | 76.8799 | 65.2076 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.9053 | 60.3875 | salmo_salar | ENSSSAP00000056723 | 74.0576 | 62.1951 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.4887 | 63.1862 | salmo_trutta | ENSSTUP00000069875 | 73.774 | 62.58 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.9053 | 61.3563 | salmo_trutta | ENSSTUP00000100926 | 78.7736 | 67.217 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 67.7072 | 57.3735 | gadus_morhua | ENSGMOP00000000984 | 78.1366 | 66.2112 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 69.9677 | 55.5436 | erpetoichthys_calabaricus | ENSECRP00000016079 | 71.8232 | 57.0166 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 69.2142 | 57.0506 | pygocentrus_nattereri | ENSPNAP00000017465 | 74.594 | 61.4849 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 54.7901 | 40.4736 | ciona_savignyi | ENSCSAVP00000015403 | 58.6406 | 43.318 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.2734 | 62.9709 | hucho_hucho | ENSHHUP00000008746 | 76.7519 | 65.0723 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 62.0022 | 53.1755 | hucho_hucho | ENSHHUP00000058415 | 71.3755 | 61.2144 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.9505 | 62.1098 | scleropages_formosus | ENSSFOP00015007603 | 77.191 | 64.8315 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 29.2788 | 24.1119 | sinocyclocheilus_grahami | ENSSGRP00000059348 | 74.7253 | 61.5385 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 30.3552 | 26.2648 | sinocyclocheilus_grahami | ENSSGRP00000067362 | 77.4725 | 67.033 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 70.3983 | 57.5888 | denticeps_clupeoides | ENSDCDP00000056836 | 75.9582 | 62.1371 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 70.3983 | 57.5888 | denticeps_clupeoides | ENSDCDP00000056600 | 75.9582 | 62.1371 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.3046 | 61.7869 | paramormyrops_kingsleyae | ENSPKIP00000041361 | 76.5169 | 64.4944 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 74.1658 | 63.0786 | oncorhynchus_tshawytscha | ENSOTSP00005072785 | 71.9958 | 61.233 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 73.3046 | 62.2174 | oncorhynchus_tshawytscha | ENSOTSP00005009484 | 72.9904 | 61.9507 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 71.7976 | 62.3251 | myripristis_murdjan | ENSMMDP00005006786 | 81.2424 | 70.5238 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.4435 | 58.7729 | cyprinus_carpio_carpio | ENSCCRP00000178651 | 76.4773 | 62.0455 |
| ENSGACG00000020709 | gasterosteus_aculeatus | ENSGACP00000027383 | 72.1206 | 58.7729 | cyprinus_carpio_carpio | ENSCCRP00000168636 | 76.3968 | 62.2577 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
