RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSGACG00000014662	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1489 bases	Strand	Minus strand
Position	scaffold_270 : 722 - 2210	RNA binding domain	CYTH
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGACP00000019351	CYTH	PF01928	3.8e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSGACT00000019389	860	174aa	ENSGACP00000019351

Gene Model

Click here to download ENSGACG00000014662's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGACG00000014662's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGACG00000014662

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGACG00000014662	gasterosteus_aculeatus	ENSGACP00000019351	54.5977	45.977	pundamilia_nyererei	ENSPNYP00000014662	60.1266	50.6329
ENSGACG00000014662	gasterosteus_aculeatus	ENSGACP00000019351	35.0575	31.6092	sphenodon_punctatus	ENSSPUP00000000493	61	55
ENSGACG00000014662	gasterosteus_aculeatus	ENSGACP00000019351	38.5057	28.7356	naja_naja	ENSNNAP00000028277	59.292	44.2478

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression