RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSGACG00000011784	Gene ID	562040	Accession	-
Symbol	endouc	Alias	-	Full Name	endonuclease, polyU-specific C
Status	Confidence	Length	2673 bases	Strand	Plus strand
Position	groupXIX : 15047037 - 15049709	RNA binding domain	XendoU
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGACP00000015590	XendoU	PF09412	1.1e-98	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
endouc-201	ENSGACT00000015621	1342	314aa	ENSGACP00000015590

Gene Model

Click here to download ENSGACG00000011784's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGACG00000011784's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000021915	75.945	58.4192	gasterosteus_aculeatus	ENSGACP00000015590	70.3822	54.1401
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000027408	54.902	43.4641	gasterosteus_aculeatus	ENSGACP00000015590	53.5032	42.3567
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000000906	38.6598	23.9691	gasterosteus_aculeatus	ENSGACP00000015590	47.7707	29.6178

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	78.6624	69.7452	fundulus_heteroclitus	ENSFHEP00000025808	72.6471	64.4118
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.9873	75.1592	poecilia_reticulata	ENSPREP00000026112	85.7143	74.9206
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	92.9936	84.0764	cyclopterus_lumpus	ENSCLMP00005022173	92.9936	84.0764
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.3503	75.4777	oreochromis_niloticus	ENSONIP00000018447	85.623	75.7188
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	83.121	70.7006	oryzias_latipes	ENSORLP00000013825	83.9228	71.3826
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	83.4395	73.2484	xiphophorus_maculatus	ENSXMAP00000001560	83.4395	73.2484
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	55.0955	47.7707	haplochromis_burtoni	ENSHBUP00000012527	72.3849	62.7615
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.6688	77.3885	haplochromis_burtoni	ENSHBUP00000008144	86.2179	77.8846
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	72.293	64.0127	astatotilapia_calliptera	ENSACLP00000040553	82.2464	72.8261
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	86.9427	78.3439	astatotilapia_calliptera	ENSACLP00000004179	87.2204	78.5942
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	91.0828	81.8471	sparus_aurata	ENSSAUP00010052894	91.3738	82.1086
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	50.3185	41.0828	lates_calcarifer	ENSLCAP00010033576	71.4932	58.371
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	87.5796	78.0255	cyprinodon_variegatus	ENSCVAP00000005196	88.141	78.5256
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	87.8981	78.6624	takifugu_rubripes	ENSTRUP00000021726	86.25	77.1875
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.8026	69.1083	oryzias_melastigma	ENSOMEP00000009395	83.3333	69.5513
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	89.4904	79.6178	seriola_dumerili	ENSSDUP00000025753	89.7764	79.8722
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	66.242	56.3694	dicentrarchus_labrax	ENSDLAP00005055936	60.4651	51.4535
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	83.4395	72.6115	poecilia_latipinna	ENSPLAP00000011911	83.1746	72.381
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	89.172	80.8917	cottoperca_gobio	ENSCGOP00000015464	89.172	80.8917
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	84.0764	74.5223	labrus_bergylta	ENSLBEP00000034248	85.4369	75.7282
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	78.6624	68.7898	labrus_bergylta	ENSLBEP00000013251	78.9137	69.0096
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	80.8917	70.7006	anabas_testudineus	ENSATEP00000031473	84.9498	74.2475
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	54.1401	48.4076	stegastes_partitus	ENSSPAP00000011802	88.0829	78.7565
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	88.8535	78.9809	amphiprion_ocellaris	ENSAOCP00000024005	89.4231	79.4872
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	90.7643	81.2102	seriola_lalandi_dorsalis	ENSSLDP00000029594	91.0543	81.4697
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	86.9427	74.5223	tetraodon_nigroviridis	ENSTNIP00000015103	86.1199	73.817
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	81.8471	72.293	nothobranchius_furzeri	ENSNFUP00015048004	85.3821	75.4153
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	74.5223	66.242	betta_splendens	ENSBSLP00000038276	85.7143	76.1905
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	87.2611	79.6178	scophthalmus_maximus	ENSSMAP00000010929	87.5399	79.8722
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	79.9363	66.879	hippocampus_comes	ENSHCOP00000009471	84.2282	70.4698
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	81.8471	68.7898	oryzias_javanicus	ENSOJAP00000040017	81.5873	68.5714
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	88.535	79.6178	acanthochromis_polyacanthus	ENSAPOP00000015413	89.1026	80.1282
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	73.5669	64.6497	pundamilia_nyererei	ENSPNYP00000017507	78.8396	69.2833
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	89.8089	81.8471	larimichthys_crocea	ENSLCRP00005052306	78.5515	71.5877
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	88.8535	78.6624	amphiprion_percula	ENSAPEP00000009631	89.4231	79.1667
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	86.9427	74.8408	cynoglossus_semilaevis	ENSCSEP00000009203	85.5799	73.6677
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.4841	70.7006	oryzias_sinensis	ENSOSIP00000041385	83.2797	71.3826
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.0318	75.4777	sander_lucioperca	ENSSLUP00000060020	85.0318	75.4777
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	86.9427	78.3439	maylandia_zebra	ENSMZEP00005023146	87.2204	78.5942
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	72.293	64.0127	maylandia_zebra	ENSMZEP00005025425	82.2464	72.8261
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	88.2166	78.3439	mastacembelus_armatus	ENSMAMP00000009217	88.4984	78.5942
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.3503	74.8408	amphilophus_citrinellus	ENSACIP00000007645	86.7314	76.0518
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	83.758	72.9299	kryptolebias_marmoratus	ENSKMAP00000006592	89.7611	78.157
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	40.7643	23.8854	caenorhabditis_elegans	M60.2.1	22.3776	13.1119
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	45.8599	28.3439	drosophila_melanogaster	FBpp0082654	44.7205	27.6398
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	44.9045	30.8917	drosophila_melanogaster	FBpp0073243	23.8176	16.3851
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	62.7389	47.4522	petromyzon_marinus	ENSPMAP00000000696	64.8026	49.0132
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	59.5541	48.0892	petromyzon_marinus	ENSPMAP00000003302	63.3898	51.1864
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	61.465	48.7261	eptatretus_burgeri	ENSEBUP00000020252	66.782	52.9412
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	61.1465	44.2675	eptatretus_burgeri	ENSEBUP00000009744	45.1765	32.7059
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	67.5159	51.5924	callorhinchus_milii	ENSCMIP00000032346	72.6027	55.4795
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	66.5605	51.5924	latimeria_chalumnae	ENSLACP00000019269	71.5753	55.4795
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	77.707	62.1019	clupea_harengus	ENSCHAP00000011736	75.5418	60.3715
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	79.9363	63.6943	danio_rerio	ENSDARP00000154618	81.2298	64.7249
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	78.0255	64.6497	carassius_auratus	ENSCARP00000009198	79.288	65.6958
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	79.2994	63.0573	astyanax_mexicanus	ENSAMXP00000020768	80.5825	64.0777
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	77.3885	63.0573	ictalurus_punctatus	ENSIPUP00000024975	74.0854	60.3659
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	76.1146	61.1465	electrophorus_electricus	ENSEEEP00000008410	77.8502	62.5407
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.1656	68.4713	esox_lucius	ENSELUP00000042788	66.4948	55.4124
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	81.8471	68.7898	oncorhynchus_kisutch	ENSOKIP00005013484	82.6367	69.4534
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.1656	69.1083	oncorhynchus_mykiss	ENSOMYP00000059349	72.067	60.6145
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.1656	69.1083	salmo_salar	ENSSSAP00000091115	63.7037	53.5802
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.1656	69.1083	salmo_trutta	ENSSTUP00000018087	82.9582	69.7749
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	82.8026	70.0637	gadus_morhua	ENSGMOP00000058674	80.2469	67.9012
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	66.242	51.5924	xenopus_tropicalis	ENSXETP00000081348	65.6151	51.1041
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	65.9236	52.2293	chrysemys_picta_bellii	ENSCPBP00000036223	69.4631	55.0336
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	67.8344	53.5032	sphenodon_punctatus	ENSSPUP00000020602	68.0511	53.6741
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	61.7834	49.0446	meleagris_gallopavo	ENSMGAP00000014537	67.128	53.2872
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	62.7389	49.0446	gallus_gallus	ENSGALP00010018450	62.7389	49.0446
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	35.0318	27.707	serinus_canaria	ENSSCAP00000012289	71.4286	56.4935
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	24.5223	19.7452	ornithorhynchus_anatinus	ENSOANP00000049842	27.6978	22.3022
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	67.5159	53.8217	sarcophilus_harrisii	ENSSHAP00000031626	72.8522	58.0756
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	63.6943	50.3185	pelodiscus_sinensis	ENSPSIP00000011583	70.1754	55.4386
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	71.9745	57.3248	erpetoichthys_calabaricus	ENSECRP00000009130	77.931	62.069
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	68.7898	55.414	anolis_carolinensis	ENSACAP00000015813	74.2268	59.7938
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	68.1529	55.7325	vombatus_ursinus	ENSVURP00010010260	73.5395	60.1375
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	68.4713	55.414	phascolarctos_cinereus	ENSPCIP00000007947	54.7074	44.2748
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	78.3439	64.6497	pygocentrus_nattereri	ENSPNAP00000031525	79.6116	65.6958
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	62.4204	49.6815	geospiza_fortis	ENSGFOP00000010251	67.8201	53.9792
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	63.0573	50	taeniopygia_guttata	ENSTGUP00000012501	64.4951	51.1401
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	61.7834	49.3631	ficedula_albicollis	ENSFALP00000031160	65.9864	52.7211
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	81.5287	69.1083	hucho_hucho	ENSHHUP00000091253	63.0542	53.4483
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	67.8344	54.4586	podarcis_muralis	ENSPMRP00000002877	72.449	58.1633
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	63.6943	49.0446	struthio_camelus_australis	ENSSCUP00000015246	66.8896	51.505
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	39.8089	31.8471	strigops_habroptila	ENSSHBP00005015578	71.0227	56.8182
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	60.828	46.1783	leptobrachium_leishanense	ENSLLEP00000010941	46.8137	35.5392
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	76.4331	64.3312	scleropages_formosus	ENSSFOP00015002356	77.4194	65.1613
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	62.7389	52.2293	sinocyclocheilus_grahami	ENSSGRP00000063662	68.1661	56.7474
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	60.1911	50.6369	sinocyclocheilus_grahami	ENSSGRP00000082734	85.1351	71.6216
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	66.5605	52.5478	gopherus_evgoodei	ENSGEVP00005003099	66.7732	52.7157
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	74.5223	61.465	denticeps_clupeoides	ENSDCDP00000014034	76.2215	62.8665
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	74.5223	61.1465	paramormyrops_kingsleyae	ENSPKIP00000009812	75.4839	61.9355
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	62.1019	48.0892	aquila_chrysaetos_chrysaetos	ENSACCP00020017182	67.474	52.2491
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	81.8471	68.7898	oncorhynchus_tshawytscha	ENSOTSP00005084730	71.7877	60.3352
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	85.3503	73.8854	myripristis_murdjan	ENSMMDP00005030205	85.623	74.1214
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	57.3248	47.7707	salvator_merianae	ENSSMRP00000011920	74.0741	61.7284
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	78.6624	64.0127	cyprinus_carpio_carpio	ENSCCRP00000074924	79.9353	65.0485
ENSGACG00000011784	gasterosteus_aculeatus	ENSGACP00000015590	77.3885	63.3758	cyprinus_carpio_carpio	ENSCCRP00000163360	78.6408	64.4013

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression