Description

Ensembl ID ENSGACG00000000822 Gene ID 573001 Accession -
Symbol rbm4.1 Alias - Full Name RNA binding motif protein 4.1
Status Confidence Length 4177 bases Strand Plus strand
Position scaffold_47 : 832951 - 837127 RNA binding domain RRM_5 , RRM_1 , zf-CCHC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGACP00000001066 RRM_5 PF13893 1.1e-06 1
ENSGACP00000001066 RRM_1 PF00076 1.7e-30 2
ENSGACP00000001066 RRM_1 PF00076 1.7e-30 3
ENSGACP00000001066 zf-CCHC PF00098 7.1e-08 4
ENSGACP00000001067 RRM_5 PF13893 2.1e-06 1
ENSGACP00000001067 RRM_1 PF00076 3.3e-30 2
ENSGACP00000001067 RRM_1 PF00076 3.3e-30 3
ENSGACP00000001067 zf-CCHC PF00098 3.8e-08 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
rbm4.1-201 ENSGACT00000001066 1138 332aa ENSGACP00000001066
rbm4.1-202 ENSGACT00000001067 2178 419aa ENSGACP00000001067

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001096719.506211.358gasterosteus_aculeatusENSGACP0000000106718.854410.9785
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000187125.163414.7059gasterosteus_aculeatusENSGACP0000000106718.377110.7399
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002594719.293511.6848gasterosteus_aculeatusENSGACP0000000106716.945110.2625
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000548416.87346.69975gasterosteus_aculeatusENSGACP0000000106716.22916.44391
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002067825.073712.9794gasterosteus_aculeatusENSGACP0000000106720.286410.5012
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002682536.538525.9615gasterosteus_aculeatusENSGACP000000010679.069216.44391
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002682420.379113.2701gasterosteus_aculeatusENSGACP0000000106710.26256.68258
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001975633.333320.2381gasterosteus_aculeatusENSGACP0000000106713.36528.11456
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002005431.578919.4737gasterosteus_aculeatusENSGACP0000000106714.31988.83055
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001353118.45649.39597gasterosteus_aculeatusENSGACP0000000106726.25313.3652
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002171528.424716.7808gasterosteus_aculeatusENSGACP0000000106719.809111.6945
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000048835.195517.8771gasterosteus_aculeatusENSGACP0000000106715.03587.63723
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001971725.075512.6888gasterosteus_aculeatusENSGACP0000000106719.809110.0239
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001244224.742314.6907gasterosteus_aculeatusENSGACP0000000106722.911713.6038
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002278021.212112.8788gasterosteus_aculeatusENSGACP0000000106720.047712.1718
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002140517.02489.42149gasterosteus_aculeatusENSGACP0000000106724.582313.6038
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001145324.376714.6814gasterosteus_aculeatusENSGACP0000000106721.002412.6492
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001676826.934116.6189gasterosteus_aculeatusENSGACP0000000106722.434413.8425
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002393726.149413.2184gasterosteus_aculeatusENSGACP0000000106721.718410.9785
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002753924.362613.881gasterosteus_aculeatusENSGACP0000000106720.525111.6945
ENSGACG00000000822gasterosteus_aculeatusENSGACP000000125059.50824.15301gasterosteus_aculeatusENSGACP0000000106720.76379.06921
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000366621.666711.8519gasterosteus_aculeatusENSGACP0000000106727.923615.2745
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000442221.851912.5926gasterosteus_aculeatusENSGACP0000000106728.162316.2291
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001757829.629614.8148gasterosteus_aculeatusENSGACP0000000106722.911711.4558
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002084727.249414.653gasterosteus_aculeatusENSGACP0000000106725.298313.6038
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000441429.838716.129gasterosteus_aculeatusENSGACP0000000106726.491614.3198
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000001186213.76286.00293gasterosteus_aculeatusENSGACP0000000106722.43449.7852
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000002639446.93435.6132gasterosteus_aculeatusENSGACP0000000106747.49436.0382
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000595527.146817.1745gasterosteus_aculeatusENSGACP0000000106723.38914.7971
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106163.756648.1481gasterosteus_aculeatusENSGACP0000000106757.517943.4368

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106781.861672.0764fundulus_heteroclitusENSFHEP0000003494782.057472.2488
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293670.6444poecilia_reticulataENSPREP0000000536383.293670.6444
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106792.124187.8282cyclopterus_lumpusENSCLMP0000505041892.344588.0383
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634878.2816oreochromis_niloticusENSONIP0000001979586.634878.2816
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106781.622972.315oryzias_latipesENSORLP0000001564782.014472.6619
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293670.4057xiphophorus_maculatusENSXMAP0000000808683.293670.4057
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634878.5203haplochromis_burtoniENSHBUP0000001007486.634878.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634878.5203astatotilapia_callipteraENSACLP0000001129386.634878.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.544281.8616sparus_aurataENSSAUP0001002438988.123581.4727
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.066880.9069lates_calcariferENSLCAP0001003379287.648580.5226
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106782.338972.5537cyprinodon_variegatusENSCVAP0000003065982.733872.9017
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106784.248272.7924takifugu_rubripesENSTRUP0000003395884.855873.3173
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.873578.5203neolamprologus_brichardiENSNBRP0000002318286.873578.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106782.338973.031oryzias_melastigmaENSOMEP0000000428182.733873.3813
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.305580.9069seriola_dumeriliENSSDUP0000000529787.88680.5226
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293670.6444poecilia_formosaENSPFOP0000001267183.293670.6444
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.782882.1002dicentrarchus_labraxENSDLAP0000508187388.995282.2967
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293670.6444poecilia_latipinnaENSPLAP0000002885983.293670.6444
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.544281.8616cottoperca_gobioENSCGOP0000005249788.544281.8616
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106784.725576.8496labrus_bergyltaENSLBEP0000002594985.542277.5904
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.305580.6683anabas_testudineusENSATEP0000000264887.88680.285
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.544281.3842stegastes_partitusENSSPAP0000002519687.914780.8057
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106787.589580.1909amphiprion_ocellarisENSAOCP0000000720387.38180
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.305580.9069seriola_lalandi_dorsalisENSSLDP0000001657587.88680.5226
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106769.212461.0979tetraodon_nigroviridisENSTNIP0000000748288.957178.5276
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.770974.463nothobranchius_furzeriENSNFUP0001501088184.172774.8201
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106785.202977.8043betta_splendensENSBSLP0000001139485.202977.8043
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106775.89569.4511scophthalmus_maximusENSSMAP0000006756488.579481.0585
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106773.508465.3938hippocampus_comesENSHCOP0000002313278.172669.5431
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.873579.2363acanthochromis_polyacanthusENSAPOP0000000998286.666779.0476
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634878.5203pundamilia_nyerereiENSPNYP0000000603486.634878.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106788.066880.6683larimichthys_croceaENSLCRP0000501711788.277580.8612
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106787.589580.1909amphiprion_perculaENSAPEP0000001331187.38180
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106730.787626.253cynoglossus_semilaevisENSCSEP0000001199293.478379.7101
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106779.713667.3031cynoglossus_semilaevisENSCSEP0000002254281.662668.9487
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106781.861672.5537oryzias_sinensisENSOSIP0000003769382.254272.9017
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634880.4296sander_luciopercaENSSLUP0000001480786.428680.2381
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.634878.5203maylandia_zebraENSMZEP0000501223886.634878.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106787.589579.2363mastacembelus_armatusENSMAMP0000000250287.173478.8599
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106786.873578.5203amphilophus_citrinellusENSACIP0000002124586.873578.5203
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293674.7017kryptolebias_marmoratusENSKMAP0000000872684.299575.6039
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106732.696923.6277petromyzon_marinusENSPMAP0000000373664.319346.4789
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106746.539435.5609eptatretus_burgeriENSEBUP0000001116754.775341.8539
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106747.49435.5609eptatretus_burgeriENSEBUP0000001283151.822938.8021
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106734.128923.389latimeria_chalumnaeENSLACP000000071485034.2657
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106780.429668.4964clupea_harengusENSCHAP0000000922879.481167.6887
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106729.832925.2983lepisosteus_oculatusENSLOCP0000000325983.892671.1409
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.8711danio_rerioENSDARP0000005286178.758965.8711
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106775.89564.2005carassius_auratusENSCARP0000002552878.132766.0934
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.520366.1098carassius_auratusENSCARP0000012059978.333365.9524
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106772.553761.5752astyanax_mexicanusENSAMXP0000002826181.940769.5418
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106776.372364.2005ictalurus_punctatusENSIPUP0000003412474.766462.8505
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.997666.8258electrophorus_electricusENSEEEP0000001187379.951767.6329
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106776.133763.9618esox_luciusENSELUP0000003457176.682764.4231
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106774.46361.3365oncorhynchus_kisutchENSOKIP0000503647375.728262.3786
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.1551oncorhynchus_kisutchENSOKIP0000506967171.895459.4771
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.8711oncorhynchus_mykissENSOMYP0000002253673.333361.3333
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106774.940362.0525oncorhynchus_mykissENSOMYP0000006922476.213663.1068
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106777.32763.9618salmo_salarENSSSAP0000017938377.51264.1148
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.3938salmo_salarENSSSAP0000011701377.283464.1686
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106775.89562.2912salmo_truttaENSSTUP0000002841276.076662.4402
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.3938salmo_truttaENSSTUP0000010291168.32356.7288
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106779.474966.8258gadus_morhuaENSGMOP0000005898677.622465.2681
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106751.07438.9021xenopus_tropicalisENSXETP0000011783763.313648.2249
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106724.582317.1838chrysemys_picta_belliiENSCPBP0000003389764.37545
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106723.866317.1838notechis_scutatusENSNSUP0000000032160.975643.9024
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106724.82118.1384laticauda_laticaudataENSLLTP0000001139366.666748.7179
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106723.38916.7064pseudonaja_textilisENSPTXP0000002374468.055648.6111
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106765.871153.222erpetoichthys_calabaricusENSECRP0000000188466.028753.3493
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106765.393850.358erpetoichthys_calabaricusENSECRP0000000190964.168649.4145
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106731.980921.2411anolis_carolinensisENSACAP0000002467138.068225.2841
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106725.059718.6158naja_najaENSNNAP0000000694936.082526.8041
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.520366.3484pygocentrus_nattereriENSPNAP0000000719879.086566.8269
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.758965.1551hucho_huchoENSHHUP0000004081572.847760.2649
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.281664.9165hucho_huchoENSHHUP0000000607276.635563.5514
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106729.594320.7637podarcis_muralisENSPMRP0000002815043.508830.5263
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106750.119337.4702leptobrachium_leishanenseENSLLEP0000002250762.130246.4497
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106774.940362.2912scleropages_formosusENSSFOP0001507837074.761962.1429
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106724.82117.4224terrapene_carolina_triunguisENSTMTP0000000354355.61539.0374
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106777.088365.3938sinocyclocheilus_grahamiENSSGRP0000009910777.831366.0241
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106777.565665.6325sinocyclocheilus_grahamiENSSGRP0000008763077.38165.4762
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106723.866316.4678gopherus_evgoodeiENSGEVP0000501133862.111842.8571
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.281668.0191denticeps_clupeoidesENSDCDP0000000170857.142949.6516
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106775.656362.2912paramormyrops_kingsleyaeENSPKIP0000000318874.940961.7021
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106778.520365.3938oncorhynchus_tshawytschaENSOTSP0000501724671.677659.695
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106774.701761.8138oncorhynchus_tshawytschaENSOTSP0000503055275.970962.8641
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106783.293672.5537myripristis_murdjanENSMMDP0000501836882.897972.209
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106731.980921.7184salvator_merianaeENSSMRP0000002640038.505726.1494
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106776.849664.4391cyprinus_carpio_carpioENSCCRP0000010315277.218264.7482
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106777.804365.8711cyprinus_carpio_carpioENSCCRP0000012297477.61965.7143
ENSGACG00000000822gasterosteus_aculeatusENSGACP0000000106723.866316.9451chelonoidis_abingdoniiENSCABP0000002918368.027248.2993

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression