Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs rRNA
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000280969 Gene ID 140032 Accession 18501
Symbol RPS4Y2 Alias RPS4Y2P Full Name ribosomal protein S4 Y-linked 2
Status Confidence Length 24925 bases Strand Plus strand
Position Y : 20756108 - 20781032 RNA binding domain Ribosomal_S4e , KOW , RS4NT
Summary The protein encoded by this gene is a ribosomal protein that is highly similar to RPS4Y1. This gene is located in the male-specific region of the Y chromosome. [provided by RefSeq, Aug 2012]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000486252 KOW PF00467 1.4e-05 1
ENSP00000486252 RS4NT PF08071 2e-20 2
ENSP00000486252 Ribosomal_S4e PF00900 1.5e-35 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
20671934 Genetic dissection of the AZF regions of the human Y chromosome: thriller or filler for male (in)fertility? Paulo Navarro-Costa 2010-01-01 Journal of biomedicine & biotechnology

Transcripts

Name Transcript ID bp Protein Translation ID
RPS4Y2-201 ENST00000629237 848 263aa ENSP00000486252

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000280969homo_sapiensENSP0000025078497.338493.9164homo_sapiensENSP0000048625297.338493.9164
ENSG00000280969homo_sapiensENSP0000036274495.817591.635homo_sapiensENSP0000048625295.817591.635

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000280969homo_sapiensENSP0000048625298.859397.3384pan_troglodytesENSPTRP0000003879998.859397.3384
ENSG00000280969homo_sapiensENSP0000048625295.05792.0152ornithorhynchus_anatinusENSOANP0000000468495.05792.0152
ENSG00000280969homo_sapiensENSP0000048625295.437392.0152sarcophilus_harrisiiENSSHAP0000000648895.437392.0152
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954sarcophilus_harrisiiENSSHAP0000000932795.437392.3954
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129sarcophilus_harrisiiENSSHAP0000000713593.207687.5472
ENSG00000280969homo_sapiensENSP0000048625292.395485.9316notamacropus_eugeniiENSMEUP0000000727393.103486.59
ENSG00000280969homo_sapiensENSP0000048625286.311882.1293macaca_fascicularisENSMFAP0000006177676.949273.2203
ENSG00000280969homo_sapiensENSP0000048625298.098995.057macaca_mulattaENSMMUP0000008119498.098995.057
ENSG00000280969homo_sapiensENSP0000048625298.098995.4373papio_anubisENSPANP0000005117598.098995.4373
ENSG00000280969homo_sapiensENSP0000048625243.726241.8251ailuropoda_melanoleucaENSAMEP0000004127493.495989.4309
ENSG00000280969homo_sapiensENSP0000048625244.106542.2053ailuropoda_melanoleucaENSAMEP0000002272894.308990.2439
ENSG00000280969homo_sapiensENSP0000048625293.155988.5932monodelphis_domesticaENSMODP0000001386192.80388.2576
ENSG00000280969homo_sapiensENSP0000048625295.05792.0152monodelphis_domesticaENSMODP0000003365695.05792.0152
ENSG00000280969homo_sapiensENSP0000048625295.437392.0152monodelphis_domesticaENSMODP0000003524695.437392.0152
ENSG00000280969homo_sapiensENSP0000048625296.958294.2966chlorocebus_sabaeusENSCSAP0000001432591.397988.8889
ENSG00000280969homo_sapiensENSP0000048625292.395487.0722prolemur_simusENSPSMP0000001075692.748187.4046
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954vombatus_ursinusENSVURP0001002885295.437392.3954
ENSG00000280969homo_sapiensENSP0000048625293.155988.9734vombatus_ursinusENSVURP0001000335193.155988.9734
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954vombatus_ursinusENSVURP0001002358395.437392.3954
ENSG00000280969homo_sapiensENSP0000048625250.950649.4297rhinopithecus_bietiENSRBIP0000003046193.706390.9091
ENSG00000280969homo_sapiensENSP0000048625290.114187.0722phascolarctos_cinereusENSPCIP0000002541193.675990.5138
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954phascolarctos_cinereusENSPCIP0000001288095.437392.3954
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954phascolarctos_cinereusENSPCIP0000003501372.543470.2312
ENSG00000280969homo_sapiensENSP0000048625250.950649.4297rhinopithecus_roxellanaENSRROP0000000065393.055690.2778
ENSG00000280969homo_sapiensENSP0000048625275.665460.4563caenorhabditis_elegansY43B11AR.4.176.83461.39
ENSG00000280969homo_sapiensENSP0000048625285.551371.4829drosophila_melanogasterFBpp031208086.206972.0307
ENSG00000280969homo_sapiensENSP0000048625233.840329.6578ciona_intestinalisENSCINP0000001555087.254976.4706
ENSG00000280969homo_sapiensENSP0000048625226.235720.9125ciona_intestinalisENSCINP0000001556186.2568.75
ENSG00000280969homo_sapiensENSP0000048625292.395485.9316petromyzon_marinusENSPMAP0000000812592.395485.9316
ENSG00000280969homo_sapiensENSP0000048625244.106538.7833petromyzon_marinusENSPMAP0000000862174.838765.8064
ENSG00000280969homo_sapiensENSP0000048625288.973479.0875eptatretus_burgeriENSEBUP0000000895064.285757.1429
ENSG00000280969homo_sapiensENSP0000048625293.916488.9734callorhinchus_miliiENSCMIP0000000633393.207688.3019
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954latimeria_chalumnaeENSLACP0000000336295.437392.3954
ENSG00000280969homo_sapiensENSP0000048625293.155988.2129lepisosteus_oculatusENSLOCP0000001777993.511588.5496
ENSG00000280969homo_sapiensENSP0000048625293.155985.5513clupea_harengusENSCHAP0000005902093.155985.5513
ENSG00000280969homo_sapiensENSP0000048625293.916487.0722danio_rerioENSDARP0000010808993.916487.0722
ENSG00000280969homo_sapiensENSP0000048625293.536185.9316carassius_auratusENSCARP0000002222293.536185.9316
ENSG00000280969homo_sapiensENSP0000048625293.536186.3118carassius_auratusENSCARP0000001410484.536178.0069
ENSG00000280969homo_sapiensENSP0000048625282.889776.0456carassius_auratusENSCARP0000003853588.617981.3008
ENSG00000280969homo_sapiensENSP0000048625292.015285.1711astyanax_mexicanusENSAMXP0000001365392.015285.1711
ENSG00000280969homo_sapiensENSP0000048625293.536186.692ictalurus_punctatusENSIPUP0000000121893.181886.3636
ENSG00000280969homo_sapiensENSP0000048625290.874583.6502esox_luciusENSELUP0000001359890.530383.3333
ENSG00000280969homo_sapiensENSP0000048625293.536187.8327electrophorus_electricusENSEEEP0000002179693.536187.8327
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909oncorhynchus_kisutchENSOKIP0000507150691.63584.7909
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909oncorhynchus_kisutchENSOKIP0000510422291.63584.7909
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909oncorhynchus_mykissENSOMYP0000007866791.63584.7909
ENSG00000280969homo_sapiensENSP0000048625289.733882.8897oncorhynchus_mykissENSOMYP0000007866089.393982.5758
ENSG00000280969homo_sapiensENSP0000048625284.030475.6654salmo_salarENSSSAP0000003750983.082774.812
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909salmo_salarENSSSAP0000008155986.379979.9283
ENSG00000280969homo_sapiensENSP0000048625292.015284.7909salmo_truttaENSSTUP0000007349792.015284.7909
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909salmo_truttaENSSTUP0000009577391.63584.7909
ENSG00000280969homo_sapiensENSP0000048625293.916486.692gadus_morhuaENSGMOP0000002043080.45674.2671
ENSG00000280969homo_sapiensENSP0000048625293.536187.0722fundulus_heteroclitusENSFHEP0000001779293.181886.7424
ENSG00000280969homo_sapiensENSP0000048625293.155988.5932poecilia_reticulataENSPREP0000000851093.155988.5932
ENSG00000280969homo_sapiensENSP0000048625293.155988.2129xiphophorus_maculatusENSXMAP0000001487093.155988.2129
ENSG00000280969homo_sapiensENSP0000048625293.916488.9734oryzias_latipesENSORLP0000001201593.916488.9734
ENSG00000280969homo_sapiensENSP0000048625293.536187.0722cyclopterus_lumpusENSCLMP0000502007293.536187.0722
ENSG00000280969homo_sapiensENSP0000048625292.775787.0722oreochromis_niloticusENSONIP0000007815181.879276.8456
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129haplochromis_burtoniENSHBUP0000002839093.916488.2129
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129astatotilapia_callipteraENSACLP0000002804493.916488.2129
ENSG00000280969homo_sapiensENSP0000048625293.916488.5932sparus_aurataENSSAUP0001002549393.916488.5932
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129lates_calcariferENSLCAP0001005209693.916488.2129
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954xenopus_tropicalisENSXETP0000005675595.437392.3954
ENSG00000280969homo_sapiensENSP0000048625295.05792.0152chrysemys_picta_belliiENSCPBP0000001092391.911888.9706
ENSG00000280969homo_sapiensENSP0000048625295.817592.7757anas_platyrhynchos_platyrhynchosENSAPLP0000000646477.777875.3086
ENSG00000280969homo_sapiensENSP0000048625295.817592.7757gallus_gallusENSGALP0001002264673.684271.345
ENSG00000280969homo_sapiensENSP0000048625284.410681.3688meleagris_gallopavoENSMGAP0000003190595.27991.8455
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954meleagris_gallopavoENSMGAP0000000999792.619989.6679
ENSG00000280969homo_sapiensENSP0000048625290.874585.5513parus_majorENSPMJP0000001624879.40274.7508
ENSG00000280969homo_sapiensENSP0000048625281.368876.0456neolamprologus_brichardiENSNBRP0000001526787.346981.6327
ENSG00000280969homo_sapiensENSP0000048625293.916489.7338erpetoichthys_calabaricusENSECRP0000001431593.560689.3939
ENSG00000280969homo_sapiensENSP0000048625230.418326.2357kryptolebias_marmoratusENSKMAP0000002003074.074163.8889
ENSG00000280969homo_sapiensENSP0000048625293.916488.5932oryzias_javanicusENSOJAP0000003390493.916488.5932
ENSG00000280969homo_sapiensENSP0000048625293.155987.0722amphilophus_citrinellusENSACIP0000001638093.155987.0722
ENSG00000280969homo_sapiensENSP0000048625293.155987.8327dicentrarchus_labraxENSDLAP0000508203476.08771.7391
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129amphiprion_perculaENSAPEP0000002074393.916488.2129
ENSG00000280969homo_sapiensENSP0000048625293.916488.5932oryzias_sinensisENSOSIP0000003380493.916488.5932
ENSG00000280969homo_sapiensENSP0000048625288.593285.5513pelodiscus_sinensisENSPSIP0000000441795.10291.8367
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954gopherus_evgoodeiENSGEVP0000501540195.437392.3954
ENSG00000280969homo_sapiensENSP0000048625288.593285.5513chelonoidis_abingdoniiENSCABP0000001860195.10291.8367
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129seriola_dumeriliENSSDUP0000002048693.916488.2129
ENSG00000280969homo_sapiensENSP0000048625285.931682.8897struthio_camelus_australisENSSCUP0000002243092.244988.9796
ENSG00000280969homo_sapiensENSP0000048625287.072284.0304anser_brachyrhynchusENSABRP0000000309091.967988.755
ENSG00000280969homo_sapiensENSP0000048625293.155987.8327gasterosteus_aculeatusENSGACP0000002477593.511588.1679
ENSG00000280969homo_sapiensENSP0000048625293.536187.4525cynoglossus_semilaevisENSCSEP0000000092993.536187.4525
ENSG00000280969homo_sapiensENSP0000048625293.155988.2129poecilia_formosaENSPFOP0000000694793.155988.2129
ENSG00000280969homo_sapiensENSP0000048625293.536187.8327myripristis_murdjanENSMMDP0000502469293.536187.8327
ENSG00000280969homo_sapiensENSP0000048625293.916487.0722sander_luciopercaENSSLUP0000000329693.916487.0722
ENSG00000280969homo_sapiensENSP0000048625295.05792.3954strigops_habroptilaENSSHBP0000500833985.324282.9352
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129amphiprion_ocellarisENSAOCP0000002919493.916488.2129
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954terrapene_carolina_triunguisENSTMTP0000000605895.437392.3954
ENSG00000280969homo_sapiensENSP0000048625290.494383.27hucho_huchoENSHHUP0000003999389.811382.6415
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909hucho_huchoENSHHUP0000000953391.63584.7909
ENSG00000280969homo_sapiensENSP0000048625292.775786.692betta_splendensENSBSLP0000002967492.775786.692
ENSG00000280969homo_sapiensENSP0000048625292.775785.5513pygocentrus_nattereriENSPNAP0000002540588.727381.8182
ENSG00000280969homo_sapiensENSP0000048625294.676887.4525anabas_testudineusENSATEP0000002025394.676887.4525
ENSG00000280969homo_sapiensENSP0000048625284.790971.1027ciona_savignyiENSCSAVP0000000886286.100472.2008
ENSG00000280969homo_sapiensENSP0000048625281.368867.3004saccharomyces_cerevisiaeYJR145C81.992367.8161
ENSG00000280969homo_sapiensENSP0000048625281.368867.3004saccharomyces_cerevisiaeYHR203C81.992367.8161
ENSG00000280969homo_sapiensENSP0000048625288.593283.27seriola_lalandi_dorsalisENSSLDP0000000412993.287.6
ENSG00000280969homo_sapiensENSP0000048625293.916487.0722labrus_bergyltaENSLBEP0000000224893.916487.0722
ENSG00000280969homo_sapiensENSP0000048625274.904968.4411labrus_bergyltaENSLBEP0000002200292.488384.507
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129pundamilia_nyerereiENSPNYP0000002312893.916488.2129
ENSG00000280969homo_sapiensENSP0000048625293.916487.8327mastacembelus_armatusENSMAMP0000001536293.916487.8327
ENSG00000280969homo_sapiensENSP0000048625293.916488.5932stegastes_partitusENSSPAP0000002989893.916488.5932
ENSG00000280969homo_sapiensENSP0000048625282.889777.9468stegastes_partitusENSSPAP0000002141884.824979.7665
ENSG00000280969homo_sapiensENSP0000048625291.63584.7909oncorhynchus_tshawytschaENSOTSP0000502319691.63584.7909
ENSG00000280969homo_sapiensENSP0000048625283.650275.6654oncorhynchus_tshawytschaENSOTSP0000503845883.333375.3788
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129acanthochromis_polyacanthusENSAPOP0000000485493.916488.2129
ENSG00000280969homo_sapiensENSP0000048625295.05792.3954aquila_chrysaetos_chrysaetosENSACCP0002001208495.05792.3954
ENSG00000280969homo_sapiensENSP0000048625287.072281.749nothobranchius_furzeriENSNFUP0001503065582.97177.8986
ENSG00000280969homo_sapiensENSP0000048625293.916487.8327cyprinodon_variegatusENSCVAP0000001085693.916487.8327
ENSG00000280969homo_sapiensENSP0000048625293.155987.0722denticeps_clupeoidesENSDCDP0000000901693.155987.0722
ENSG00000280969homo_sapiensENSP0000048625293.536187.8327larimichthys_croceaENSLCRP0000501670792.134886.5169
ENSG00000280969homo_sapiensENSP0000048625293.536187.8327takifugu_rubripesENSTRUP0000007273893.536187.8327
ENSG00000280969homo_sapiensENSP0000048625293.536188.9734hippocampus_comesENSHCOP0000001591293.536188.9734
ENSG00000280969homo_sapiensENSP0000048625290.114182.5095cyprinus_carpio_carpioENSCCRP0000005045688.76481.2734
ENSG00000280969homo_sapiensENSP0000048625293.916486.692cyprinus_carpio_carpioENSCCRP0000005044993.916486.692
ENSG00000280969homo_sapiensENSP0000048625295.437392.3954coturnix_japonicaENSCJPP0000501224895.437392.3954
ENSG00000280969homo_sapiensENSP0000048625293.155988.2129poecilia_latipinnaENSPLAP0000000256793.155988.2129
ENSG00000280969homo_sapiensENSP0000048625293.155986.692sinocyclocheilus_grahamiENSSGRP0000010926293.155986.692
ENSG00000280969homo_sapiensENSP0000048625262.737657.0342sinocyclocheilus_grahamiENSSGRP0000010994689.673981.5217
ENSG00000280969homo_sapiensENSP0000048625293.916488.2129maylandia_zebraENSMZEP0000502677493.916488.2129
ENSG00000280969homo_sapiensENSP0000048625293.536187.8327tetraodon_nigroviridisENSTNIP0000000543993.893188.1679
ENSG00000280969homo_sapiensENSP0000048625287.072280.2281paramormyrops_kingsleyaeENSPKIP0000000179293.469486.1225
ENSG00000280969homo_sapiensENSP0000048625287.072278.7072paramormyrops_kingsleyaeENSPKIP0000001451763.788357.6602
ENSG00000280969homo_sapiensENSP0000048625293.155986.692scleropages_formosusENSSFOP0001501539492.452886.0377
ENSG00000280969homo_sapiensENSP0000048625293.916487.4525scleropages_formosusENSSFOP0001501537293.916487.4525
ENSG00000280969homo_sapiensENSP0000048625239.163534.6008leptobrachium_leishanenseENSLLEP0000000288469.594661.4865
ENSG00000280969homo_sapiensENSP0000048625295.05792.3954leptobrachium_leishanenseENSLLEP0000004233595.05792.3954
ENSG00000280969homo_sapiensENSP0000048625292.015285.1711scophthalmus_maximusENSSMAP0000006868684.615478.3217
ENSG00000280969homo_sapiensENSP0000048625293.916488.5932oryzias_melastigmaENSOMEP0000001841393.916488.5932

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003674enables molecular_function1NDHomo_sapiens(9606)Function
GO:0003723enables RNA binding1IBAHomo_sapiens(9606)Function
GO:0003735enables structural constituent of ribosome1IBAHomo_sapiens(9606)Function
GO:0005575is_active_in cellular_component1NDHomo_sapiens(9606)Component
GO:0006412involved_in translation1IBAHomo_sapiens(9606)Process
GO:0008150involved_in biological_process1NDHomo_sapiens(9606)Process
GO:0019843enables rRNA binding1IEAHomo_sapiens(9606)Function
GO:0022627part_of cytosolic small ribosomal subunit1IBAHomo_sapiens(9606)Component

Expression