RBP Type
Non-canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Stress granucle
BulkPerturb-seq
N.A.
Ensembl ID ENSG00000278637 Gene ID
8359
Accession
4781
Symbol
H4C1
Alias
H4C2;H4C3;H4C4;H4C5;H4C6;H4C8;H4C9;H4FA;H4-16;H4C11;H4C12;H4C13;H4C14;H4C15;H4C16;HIST1H4A
Full Name
H4 clustered histone 1
Status
Confidence
Length
402 bases
Strand
Plus strand
Position
6 : 26021649 - 26022050
RNA binding domain
N.A.
Summary
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6. [provided by RefSeq, Aug 2015]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000278637 homo_sapiens ENSP00000484789 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000479794 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000443017 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000481486 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000462355 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000347168 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000479461 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000366974 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000480960 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000367034 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000462667 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000244537 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000366956 100 100 homo_sapiens ENSP00000479106 100 100 ENSG00000278637 homo_sapiens ENSP00000477870 84.6939 84.6939 homo_sapiens ENSP00000479106 80.5825 80.5825
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000278637 homo_sapiens ENSP00000479106 100 100 nomascus_leucogenys ENSNLEP00000046925 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 pan_paniscus ENSPPAP00000000659 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 loxodonta_africana ENSLAFP00000016306 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 bos_indicus_hybrid ENSBIXP00005006023 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 panthera_pardus ENSPPRP00000024153 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 physeter_catodon ENSPCTP00005007214 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 mus_musculus ENSMUSP00000100546 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 phocoena_sinus ENSPSNP00000007166 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 phocoena_sinus ENSPSNP00000007175 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 rattus_norvegicus ENSRNOP00000087795 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 microtus_ochrogaster ENSMOCP00000001419 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 bos_taurus ENSBTAP00000062765 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 cervus_hanglu_yarkandensis ENSCHYP00000022532 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 propithecus_coquereli ENSPCOP00000002858 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 98.0583 drosophila_melanogaster FBpp0091114 100 98.0583 ENSG00000278637 homo_sapiens ENSP00000479106 100 98.0583 drosophila_melanogaster FBpp0091122 100 98.0583 ENSG00000278637 homo_sapiens ENSP00000479106 100 98.0583 drosophila_melanogaster FBpp0091124 100 98.0583 ENSG00000278637 homo_sapiens ENSP00000479106 100 98.0583 drosophila_melanogaster FBpp0091126 100 98.0583 ENSG00000278637 homo_sapiens ENSP00000479106 99.0291 97.0874 callorhinchus_milii ENSCMIP00000003320 99.0291 97.0874 ENSG00000278637 homo_sapiens ENSP00000479106 99.0291 97.0874 callorhinchus_milii ENSCMIP00000000320 99.0291 97.0874 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 latimeria_chalumnae ENSLACP00000004892 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 xiphophorus_maculatus ENSXMAP00000024421 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 100 99.0291 ciona_savignyi ENSCSAVP00000017130 44.5887 44.1558 ENSG00000278637 homo_sapiens ENSP00000479106 100 99.0291 ciona_savignyi ENSCSAVP00000013535 45.7778 45.3333 ENSG00000278637 homo_sapiens ENSP00000479106 100 99.0291 ciona_savignyi ENSCSAVP00000000940 44.5887 44.1558 ENSG00000278637 homo_sapiens ENSP00000479106 100 99.0291 ciona_savignyi ENSCSAVP00000017227 44.7826 44.3478 ENSG00000278637 homo_sapiens ENSP00000479106 97.0874 92.233 saccharomyces_cerevisiae YBR009C 97.0874 92.233 ENSG00000278637 homo_sapiens ENSP00000479106 97.0874 92.233 saccharomyces_cerevisiae YNL030W 97.0874 92.233 ENSG00000278637 homo_sapiens ENSP00000479106 100 100 cyprinodon_variegatus ENSCVAP00000011029 100 100 ENSG00000278637 homo_sapiens ENSP00000479106 90.2913 90.2913 paramormyrops_kingsleyae ENSPKIP00000038554 100 100
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000781 located_in chromosome, telomeric region 1 HDA Homo_sapiens(9606) Component GO:0000786 part_of nucleosome 3 IDA,IPI,TAS Homo_sapiens(9606) Component GO:0003677 enables DNA binding 2 IBA,TAS Homo_sapiens(9606) Function GO:0003723 enables RNA binding 1 HDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005576 located_in extracellular region 1 TAS Homo_sapiens(9606) Component GO:0005634 located_in nucleus 2 HDA,IDA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 TAS Homo_sapiens(9606) Component GO:0006334 involved_in nucleosome assembly 2 IBA,IDA Homo_sapiens(9606) Process GO:0016020 located_in membrane 1 HDA Homo_sapiens(9606) Component GO:0030527 enables structural constituent of chromatin 1 IDA Homo_sapiens(9606) Function GO:0032200 involved_in telomere organization 1 TAS Homo_sapiens(9606) Process GO:0032991 part_of protein-containing complex 1 IDA Homo_sapiens(9606) Component GO:0043505 part_of CENP-A containing nucleosome 1 IPI Homo_sapiens(9606) Component GO:0045653 involved_in negative regulation of megakaryocyte differentiation 1 IDA Homo_sapiens(9606) Process GO:0046982 enables protein heterodimerization activity 1 IEA Homo_sapiens(9606) Function GO:0061644 involved_in protein localization to CENP-A containing chromatin 1 NAS Homo_sapiens(9606) Process GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component
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