Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000269190 Gene ID 115290 Accession 18754
Symbol FBXO17 Alias FBG4;FBX26;Fbx17;FBXO26 Full Name F-box protein 17
Status Confidence Length 34342 bases Strand Minus strand
Position 19 : 38941401 - 38975742 RNA binding domain N.A.
Summary This gene encodes a member of the F-box protein family which is characterized by the F-box motif. The F-box proteins constitute one of the four subunits of the ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbxs class and it contains an F-box domain. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
FBXO17-201 ENST00000292852 2218 278aa ENSP00000292852
FBXO17-205 ENST00000599418 2222 No protein -
FBXO17-202 ENST00000595329 1299 278aa ENSP00000470361
FBXO17-204 ENST00000597696 932 No protein -
FBXO17-203 ENST00000596025 935 177aa ENSP00000470101
FBXO17-206 ENST00000599598 510 94aa ENSP00000470390
FBXO17-207 ENST00000601394 2366 109aa ENSP00000469852

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
23902Obesity1.6380000E-005-
24692Muscle, Skeletal6.0290000E-005-
36698Platelet Function Tests2.9618000E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding2IDA,IPIHomo_sapiens(9606)Function
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0006516involved_in glycoprotein catabolic process1IBAHomo_sapiens(9606)Process
GO:0019005part_of SCF ubiquitin ligase complex2IBA,IDAHomo_sapiens(9606)Component
GO:0030433involved_in ubiquitin-dependent ERAD pathway1IBAHomo_sapiens(9606)Process
GO:0031146involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1IBAHomo_sapiens(9606)Process
GO:0061630contributes_to ubiquitin protein ligase activity1IBAHomo_sapiens(9606)Function

Expression