Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000249709 Gene ID 163050 Accession 31106
Symbol ZNF564 Alias NA Full Name zinc finger protein 564
Status Confidence Length 26170 bases Strand Minus strand
Position 19 : 12525373 - 12551542 RNA binding domain zf-met
Summary Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000340004 zf-met PF12874 1.4e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ZNF564-201 ENST00000339282 2885 553aa ENSP00000340004
ZNF564-203 ENST00000427105 575 69aa ENSP00000415828
ZNF564-205 ENST00000596193 524 35aa ENSP00000470670
ZNF564-202 ENST00000416136 255 21aa ENSP00000408822
ZNF564-204 ENST00000465410 514 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000249709homo_sapiensENSP0000029292844.181832.3636homo_sapiensENSP0000034000443.942132.1881
ENSG00000249709homo_sapiensENSP0000041774020.824713.1959homo_sapiensENSP0000034000418.26411.5732
ENSG00000249709homo_sapiensENSP0000034704342.574331.6832homo_sapiensENSP0000034000438.878828.9331
ENSG00000249709homo_sapiensENSP0000034454422.003913.1631homo_sapiensENSP0000034000420.253212.1157
ENSG00000249709homo_sapiensENSP0000050704846.058735.085homo_sapiensENSP0000034000453.887941.0488
ENSG00000249709homo_sapiensENSP0000029347137.763428.201homo_sapiensENSP0000034000442.133831.4647
ENSG00000249709homo_sapiensENSP0000024364438.157928.3835homo_sapiensENSP0000034000436.708927.3056
ENSG00000249709homo_sapiensENSP0000039808917.96128.73786homo_sapiensENSP0000034000413.38166.50995
ENSG00000249709homo_sapiensENSP0000041286920.912513.308homo_sapiensENSP0000034000419.891512.6582
ENSG00000249709homo_sapiensENSP0000044841918.119711.2821homo_sapiensENSP0000034000419.168211.9349
ENSG00000249709homo_sapiensENSP0000033161421.965313.6802homo_sapiensENSP0000034000420.614812.8391

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000249709homo_sapiensENSP0000034000499.819299.6383nomascus_leucogenysENSNLEP0000001539199.819299.6383
ENSG00000249709homo_sapiensENSP0000034000410099.6383pan_paniscusENSPPAP0000004299310099.6383
ENSG00000249709homo_sapiensENSP0000034000410099.8192pan_troglodytesENSPTRP0000004287110099.8192
ENSG00000249709homo_sapiensENSP0000034000410099.6383gorilla_gorillaENSGGOP0000003482010099.6383
ENSG00000249709homo_sapiensENSP0000034000498.191796.745callithrix_jacchusENSCJAP0000005843098.369696.9203
ENSG00000249709homo_sapiensENSP0000034000499.457599.0958cercocebus_atysENSCATP0000001614799.457599.0958
ENSG00000249709homo_sapiensENSP0000034000491.139290.2351macaca_nemestrinaENSMNEP0000004618294.559193.621
ENSG00000249709homo_sapiensENSP0000034000499.276798.915papio_anubisENSPANP0000000915099.456599.0942
ENSG00000249709homo_sapiensENSP0000034000499.457599.0958mandrillus_leucophaeusENSMLEP0000002584799.457599.0958
ENSG00000249709homo_sapiensENSP0000034000494.213491.5009microcebus_murinusENSMICP0000002300994.727392
ENSG00000249709homo_sapiensENSP0000034000498.734297.2875aotus_nancymaaeENSANAP0000003782598.734297.2875
ENSG00000249709homo_sapiensENSP0000034000498.553396.745saimiri_boliviensis_boliviensisENSSBOP0000001757798.553396.745
ENSG00000249709homo_sapiensENSP0000034000496.202596.0217chlorocebus_sabaeusENSCSAP0000000294198.336498.1516
ENSG00000249709homo_sapiensENSP0000034000494.936791.1392prolemur_simusENSPSMP0000001893995.454591.6364
ENSG00000249709homo_sapiensENSP0000034000499.638399.4575rhinopithecus_bietiENSRBIP0000001413699.638399.4575
ENSG00000249709homo_sapiensENSP0000034000483.001879.9277otolemur_garnettiiENSOGAP0000000427696.226492.6625
ENSG00000249709homo_sapiensENSP0000034000498.372596.5642cebus_imitatorENSCCAP0000001911498.372596.5642
ENSG00000249709homo_sapiensENSP0000034000499.638399.4575rhinopithecus_roxellanaENSRROP0000000673499.638399.4575
ENSG00000249709homo_sapiensENSP0000034000495.298492.2242propithecus_coquereliENSPCOP0000003028895.818292.7273
ENSG00000249709homo_sapiensENSP000003400046.871613.4358drosophila_melanogasterFBpp007094711.94975.97484
ENSG00000249709homo_sapiensENSP0000034000410.48824.5208drosophila_melanogasterFBpp00709485.609282.41779

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000978enables RNA polymerase II cis-regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0003700enables DNA-binding transcription factor activity1IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IEAHomo_sapiens(9606)Component
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function

Expression