RBP Type	Canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	mRNA
Moonlighting functions	N.A.
Localizations	Nucleoli
BulkPerturb-seq	N.A.

Ensembl ID	ENSG00000244395	Gene ID	378949	Accession	23915
Symbol	RBMY1D	Alias	RBM1;RBM2;YRRM1;YRRM2;hRBMY;RBMY1A1	Full Name	RNA binding motif protein Y-linked family 1 member D
Status	Confidence	Length	14451 bases	Strand	Minus strand
Position	Y : 21880076 - 21894526	RNA binding domain	RBM1CTR , RRM_1
Summary	This gene encodes a protein containing an RNA-binding motif in the N-terminus and four SRGY (serine, arginine, glycine, tyrosine) boxes in the C-terminus. This protein likely functions as a splicing factor during spermatogenesis. Multiple closely related paralogs of this gene are found in a gene cluster in the AZFb azoospermia factor region of chromosome Y. Most of these related copies are thought to be pseudogenes, though several likely encode functional proteins. [provided by RefSeq, Mar 2016]

Protein	Domain	Pfam ID	E-value	Domain number
ENSP00000399181	RRM_1	PF00076	6.2e-21	1
ENSP00000399181	RBM1CTR	PF08081	2.1e-21	2
ENSP00000372127	RRM_1	PF00076	7e-21	1
ENSP00000372127	RBM1CTR	PF08081	2.3e-21	2
ENSP00000372099	RRM_1	PF00076	9.4e-21	1

Pubmed ID	Full Name	Cell	Author	Time	Doi

Pubmed ID	Title	Author	Time	Journal

Name	Transcript ID	bp	Protein	Translation ID
RBMY1D-201	ENST00000382653	1718	81aa	ENSP00000372099
RBMY1D-202	ENST00000382680	1921	496aa	ENSP00000372127
RBMY1D-203	ENST00000418956	1491	459aa	ENSP00000399181

Pathway ID	Pathway Name	Source

ensgID	Trait	pValue	Pubmed ID

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000244395	homo_sapiens	ENSP00000295971	12.9848	7.75717	homo_sapiens	ENSP00000372127	15.5242	9.27419
ENSG00000244395	homo_sapiens	ENSP00000304139	59.6939	48.2143	homo_sapiens	ENSP00000372127	47.1774	38.1048
ENSG00000244395	homo_sapiens	ENSP00000417451	18.8379	14.433	homo_sapiens	ENSP00000372127	40.5242	31.0484
ENSG00000244395	homo_sapiens	ENSP00000478691	34.6041	20.2346	homo_sapiens	ENSP00000372127	23.7903	13.9113
ENSG00000244395	homo_sapiens	ENSP00000445366	13.3144	7.64873	homo_sapiens	ENSP00000372127	9.47581	5.44355
ENSG00000244395	homo_sapiens	ENSP00000341826	33.871	19.6237	homo_sapiens	ENSP00000372127	25.4032	14.7177
ENSG00000244395	homo_sapiens	ENSP00000350090	37.1875	22.1875	homo_sapiens	ENSP00000372127	23.9919	14.3145
ENSG00000244395	homo_sapiens	ENSP00000493805	38.75	22.8125	homo_sapiens	ENSP00000372127	25	14.7177
ENSG00000244395	homo_sapiens	ENSP00000376309	32.5397	20.1058	homo_sapiens	ENSP00000372127	24.7984	15.3226
ENSG00000244395	homo_sapiens	ENSP00000284073	29.5732	17.378	homo_sapiens	ENSP00000372127	19.5565	11.4919
ENSG00000244395	homo_sapiens	ENSP00000310471	21.727	12.2563	homo_sapiens	ENSP00000372127	15.7258	8.87097
ENSG00000244395	homo_sapiens	ENSP00000309166	21.1538	11.8132	homo_sapiens	ENSP00000372127	15.5242	8.66935
ENSG00000244395	homo_sapiens	ENSP00000498248	71.5385	58.7179	homo_sapiens	ENSP00000372127	56.25	46.1694
ENSG00000244395	homo_sapiens	ENSP00000359645	73.6573	61.1253	homo_sapiens	ENSP00000372127	58.0645	48.1855
ENSG00000244395	homo_sapiens	ENSP00000401371	22.0207	11.9171	homo_sapiens	ENSP00000372127	17.1371	9.27419
ENSG00000244395	homo_sapiens	ENSP00000257552	27.0718	15.4696	homo_sapiens	ENSP00000372127	19.7581	11.2903
ENSG00000244395	homo_sapiens	ENSP00000281722	14.8218	7.31707	homo_sapiens	ENSP00000372127	15.9274	7.8629
ENSG00000244395	homo_sapiens	ENSP00000352956	12.9841	7.51708	homo_sapiens	ENSP00000372127	11.4919	6.65323
ENSG00000244395	homo_sapiens	ENSP00000362936	22.6481	13.5889	homo_sapiens	ENSP00000372127	13.1048	7.8629
ENSG00000244395	homo_sapiens	ENSP00000313199	26.1972	17.1831	homo_sapiens	ENSP00000372127	18.75	12.2984
ENSG00000244395	homo_sapiens	ENSP00000253363	11.5094	7.16981	homo_sapiens	ENSP00000372127	12.2984	7.66129
ENSG00000244395	homo_sapiens	ENSP00000363109	13.1399	7.67918	homo_sapiens	ENSP00000372127	15.5242	9.07258
ENSG00000244395	homo_sapiens	ENSP00000316042	32.1311	20.6557	homo_sapiens	ENSP00000372127	19.7581	12.7016
ENSG00000244395	homo_sapiens	ENSP00000318195	12.1127	6.33803	homo_sapiens	ENSP00000372127	17.3387	9.07258
ENSG00000244395	homo_sapiens	ENSP00000394902	22.4	11.4667	homo_sapiens	ENSP00000372127	16.9355	8.66935
ENSG00000244395	homo_sapiens	ENSP00000351108	27.1084	17.1687	homo_sapiens	ENSP00000372127	18.1452	11.4919
ENSG00000244395	homo_sapiens	ENSP00000261741	9.6875	4.58333	homo_sapiens	ENSP00000372127	18.75	8.87097
ENSG00000244395	homo_sapiens	ENSP00000233078	31.2039	18.6732	homo_sapiens	ENSP00000372127	25.6048	15.3226
ENSG00000244395	homo_sapiens	ENSP00000295470	20.2381	12.1429	homo_sapiens	ENSP00000372127	17.1371	10.2823
ENSG00000244395	homo_sapiens	ENSP00000466025	39.0572	28.2828	homo_sapiens	ENSP00000372127	23.3871	16.9355
ENSG00000244395	homo_sapiens	ENSP00000365950	63.6943	48.4076	homo_sapiens	ENSP00000372127	20.1613	15.3226
ENSG00000244395	homo_sapiens	ENSP00000372105	100	99.7984	homo_sapiens	ENSP00000372127	100	99.7984
ENSG00000244395	homo_sapiens	ENSP00000372484	99.7984	99.7984	homo_sapiens	ENSP00000372127	99.7984	99.7984
ENSG00000244395	homo_sapiens	ENSP00000372154	99.7984	99.7984	homo_sapiens	ENSP00000372127	99.7984	99.7984
ENSG00000244395	homo_sapiens	ENSP00000307155	98.9919	98.9919	homo_sapiens	ENSP00000372127	98.9919	98.9919
ENSG00000244395	homo_sapiens	ENSP00000250831	98.9919	98.9919	homo_sapiens	ENSP00000372127	98.9919	98.9919

Ensembl ID	Source				Target
	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000244395	homo_sapiens	ENSP00000372127	92.9436	91.5323	pan_troglodytes	ENSPTRP00000086742	91.4683	90.0794
ENSG00000244395	homo_sapiens	ENSP00000372127	90.3226	88.5081	pan_troglodytes	ENSPTRP00000087489	91.0569	89.2276
ENSG00000244395	homo_sapiens	ENSP00000372127	94.9597	93.9516	pan_troglodytes	ENSPTRP00000065125	94.7686	93.7626
ENSG00000244395	homo_sapiens	ENSP00000372127	92.5403	91.7339	pan_troglodytes	ENSPTRP00000060371	94.0574	93.2377
ENSG00000244395	homo_sapiens	ENSP00000372127	92.7419	91.3306	pan_troglodytes	ENSPTRP00000063209	91.2698	89.881
ENSG00000244395	homo_sapiens	ENSP00000372127	94.5564	93.5484	pan_troglodytes	ENSPTRP00000086688	94.3662	93.3602
ENSG00000244395	homo_sapiens	ENSP00000372127	87.5	86.4919	pan_troglodytes	ENSPTRP00000064207	93.3333	92.2581
ENSG00000244395	homo_sapiens	ENSP00000372127	92.7419	91.3306	pan_troglodytes	ENSPTRP00000062985	91.2698	89.881
ENSG00000244395	homo_sapiens	ENSP00000372127	81.25	76.0081	pan_troglodytes	ENSPTRP00000065819	85.9275	80.3838
ENSG00000244395	homo_sapiens	ENSP00000372127	88.1048	86.8952	pan_troglodytes	ENSPTRP00000086775	91.8067	90.5462
ENSG00000244395	homo_sapiens	ENSP00000372127	94.7581	93.5484	pan_troglodytes	ENSPTRP00000070297	94.1884	92.986
ENSG00000244395	homo_sapiens	ENSP00000372127	83.6694	79.8387	macaca_fascicularis	ENSMFAP00000060089	70.1013	66.8919
ENSG00000244395	homo_sapiens	ENSP00000372127	83.871	80.0403	macaca_mulatta	ENSMMUP00000075587	66.1367	63.1161
ENSG00000244395	homo_sapiens	ENSP00000372127	37.5	34.4758	macaca_mulatta	ENSMMUP00000042043	80.5195	74.026
ENSG00000244395	homo_sapiens	ENSP00000372127	27.0161	23.9919	marmota_marmota_marmota	ENSMMMP00000008320	81.2121	72.1212
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.4516	mus_musculus	ENSMUSP00000139527	55.7895	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.4516	mus_musculus	ENSMUSP00000140704	55.7895	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.4516	mus_musculus	ENSMUSP00000139784	55.7895	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	42.5403	31.4516	mus_musculus	ENSMUSP00000140512	55.5263	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	22.5806	17.1371	mus_musculus	ENSMUSP00000139969	67.4699	51.2048
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.6532	mus_musculus	ENSMUSP00000140936	55.7895	41.3158
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.4516	mus_musculus	ENSMUSP00000097930	55.7895	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.6532	mus_musculus	ENSMUSP00000140575	55.7895	41.3158
ENSG00000244395	homo_sapiens	ENSP00000372127	42.7419	31.4516	mus_musculus	ENSMUSP00000139659	55.7895	41.0526
ENSG00000244395	homo_sapiens	ENSP00000372127	43.1452	32.0564	mus_musculus	ENSMUSP00000141183	56.3158	41.8421
ENSG00000244395	homo_sapiens	ENSP00000372127	71.5726	65.7258	chlorocebus_sabaeus	ENSCSAP00000014317	72.5971	66.6667
ENSG00000244395	homo_sapiens	ENSP00000372127	44.9597	34.0726	rattus_norvegicus	ENSRNOP00000074643	57.4742	43.5567
ENSG00000244395	homo_sapiens	ENSP00000372127	12.0968	9.27419	mus_spicilegus	ENSMSIP00000005559	75	57.5
ENSG00000244395	homo_sapiens	ENSP00000372127	70.3629	67.1371	rhinopithecus_bieti	ENSRBIP00000001570	82.7014	78.91
ENSG00000244395	homo_sapiens	ENSP00000372127	27.0161	23.5887	urocitellus_parryii	ENSUPAP00010011141	81.2121	70.9091
ENSG00000244395	homo_sapiens	ENSP00000372127	70.3629	67.5403	rhinopithecus_roxellana	ENSRROP00000010671	82.8979	79.5724
ENSG00000244395	homo_sapiens	ENSP00000372127	12.5	9.27419	eptatretus_burgeri	ENSEBUP00000024062	66.6667	49.4624
ENSG00000244395	homo_sapiens	ENSP00000372127	12.7016	9.67742	eptatretus_burgeri	ENSEBUP00000011933	67.0213	51.0638

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003723	enables RNA binding	1	IBA	Homo_sapiens(9606)	Function
GO:0005654	located_in nucleoplasm	1	IDA	Homo_sapiens(9606)	Component
GO:0005681	part_of spliceosomal complex	1	IBA	Homo_sapiens(9606)	Component
GO:0005730	located_in nucleolus	1	IDA	Homo_sapiens(9606)	Component
GO:0006397	involved_in mRNA processing	1	IEA	Homo_sapiens(9606)	Process
GO:0008380	involved_in RNA splicing	1	IEA	Homo_sapiens(9606)	Process
GO:0048026	involved_in positive regulation of mRNA splicing, via spliceosome	1	IBA	Homo_sapiens(9606)	Process