RBPWorld - a comprehensive database of RNA Binding Proteins

Functions and Diseases

RBP Type	Canonical_RBPs
Diseases	SARS-COV-OC43FlavivirusesSARS-COV-2DengueZika
Drug	N.A.
Main interacting RNAs	mRNA
Moonlighting functions	N.A.
Localizations	N.A.
BulkPerturb-seq	N.A.

Description

Ensembl ID	ENSG00000214753	Gene ID	221092	Accession	25451
Symbol	HNRNPUL2	Alias	SAF-A2;HNRPUL2	Full Name	heterogeneous nuclear ribonucleoprotein U like 2
Status	Confidence	Length	14828 bases	Strand	Minus strand
Position	11 : 62712630 - 62727457	RNA binding domain	SAP , SPRY
Summary	Enables RNA binding activity. Located in nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSP00000301785	SAP	PF02037	7.7e-08	1
ENSP00000301785	SPRY	PF00622	1.1e-14	2

Showing 1 to 2 of 2 entries

RNA binding proteomes (RBPomes)

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Pubmed ID	Full Name	Cell	Author	Time	Doi
22658674	RIC_PMID22658674_Hs_HeLa	HeLa	Alfredo Castello?	2012 Jun 8	doi: 10.1016/j.cell.2012.04.031.?Epub 2012 May 31
22681889	RIC_PMID22681889_Hs_HEK293	HEK293	Alexander G Baltz	2012 Jun 8	doi: 10.1016/j.molcel.2012.05.021
25173706	Pclap_PMID25173706_Hs_HEK293	HEK293	Katharina Kramer	2014 Oct;11	doi: 10.1038/nmeth.3092.?Epub 2014 Aug 31
26632259	RIC_PMID26632259._Hs_HuH7	HuH7	Benedikt M Beckmann	2015 Dec 3	doi: 10.1038/ncomms10127.
27040163	serIC_PMID27040163_Hs_K562	K562	Thomas Conrad?	2016 Apr 4	doi: 10.1038/ncomms11212
27040163	serIC_PMID27040163_Hs_K562.1	K562	Thomas Conrad?	2016 Apr 4	doi: 10.1038/ncomms11212
29431736	RICK_PMID29431736_Hs_HeLa.RICK	HeLa	Xichen Bao	2018 Mar	doi: 10.1038/nmeth.4595.?Epub 2018 Feb 12
29636419	CARIC_PMID29636419_Hs_CARIC		Rongbing Huang	2018 Apr 24	doi: 10.1073/pnas.1718406115
30352994	eRIC_PMID30352994_Hs_JURKAT.2018	JURKAT	Joel I Perez-Perri	2018 Oct 23	doi: 10.1038/s41467-018-06557-8
30352994	RIC_PMID30352994_Hs_JURKAT.2018	JURKAT	Joel I Perez-Perri	2018 Oct 23	doi: 10.1038/s41467-018-06557-8

Showing 1 to 10 of 18 entries

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Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID
HNRNPUL2-201	ENST00000301785	5214	747aa	ENSP00000301785
HNRNPUL2-202	ENST00000540127	439	No protein	-

Showing 1 to 2 of 2 entries

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Gene Model

Click here to download ENSG00000214753's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSG00000214753's PPI file

Paralogs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000214753	homo_sapiens	ENSP00000375863	48.3645	35.7477	homo_sapiens	ENSP00000301785	55.4217	40.9639
ENSG00000214753	homo_sapiens	ENSP00000491215	51.2727	36.7273	homo_sapiens	ENSP00000301785	56.6265	40.5622

Showing 1 to 2 of 2 entries

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Orthologs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000214753	homo_sapiens	ENSP00000301785	96.5194	96.1178	nomascus_leucogenys	ENSNLEP00000004934	96.5194	96.1178
ENSG00000214753	homo_sapiens	ENSP00000301785	99.5984	99.4645	pongo_abelii	ENSPPYP00000024084	99.5984	99.4645
ENSG00000214753	homo_sapiens	ENSP00000301785	99.5984	99.4645	pan_troglodytes	ENSPTRP00000081208	99.5984	99.4645
ENSG00000214753	homo_sapiens	ENSP00000301785	99.5984	99.5984	gorilla_gorilla	ENSGGOP00000011436	99.4652	99.4652
ENSG00000214753	homo_sapiens	ENSP00000301785	80.0536	73.6278	sarcophilus_harrisii	ENSSHAP00000024356	72.9268	67.0732
ENSG00000214753	homo_sapiens	ENSP00000301785	55.4217	52.2088	notamacropus_eugenii	ENSMEUP00000008018	73.5346	69.2718
ENSG00000214753	homo_sapiens	ENSP00000301785	43.7751	42.5703	choloepus_hoffmanni	ENSCHOP00000011339	49.8476	48.4756
ENSG00000214753	homo_sapiens	ENSP00000301785	97.4565	96.2517	dasypus_novemcinctus	ENSDNOP00000005044	97.0667	95.8667
ENSG00000214753	homo_sapiens	ENSP00000301785	65.328	64.3909	erinaceus_europaeus	ENSEEUP00000002811	88.4058	87.1377
ENSG00000214753	homo_sapiens	ENSP00000301785	48.4605	47.6573	echinops_telfairi	ENSETEP00000007164	75.4167	74.1667

Showing 1 to 10 of 177 entries

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Gene Ontology

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Go ID	Go term	No. evidence	Entries	Species	Category
GO:0005654	is_active_in nucleoplasm	2	IBA,IDA	Homo_sapiens(9606)	Component
GO:0003723	enables RNA binding	1	HDA	Homo_sapiens(9606)	Function
GO:0005634	located_in nucleus	1	ISS	Homo_sapiens(9606)	Component
GO:0008150	involved_in biological_process	1	ND	Homo_sapiens(9606)	Process
GO:0016020	located_in membrane	1	HDA	Homo_sapiens(9606)	Component
GO:0045202	located_in synapse	1	IEA	Homo_sapiens(9606)	Component

Showing 1 to 6 of 6 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression