RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Transmemebrane
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000213918 Gene ID
1773
Accession
2956
Symbol
DNASE1
Alias
DNL1;DRNI
Full Name
deoxyribonuclease 1
Status
Confidence
Length
68416 bases
Strand
Plus strand
Position
16 : 3611728 - 3680143
RNA binding domain
Exo_endo_phos
Summary
This gene encodes a member of the DNase family. This protein is stored in the zymogen granules of the nuclear envelope and functions by cleaving DNA in an endonucleolytic manner. At least six autosomal codominant alleles have been characterized, DNASE1*1 through DNASE1*6, and the sequence of DNASE1*2 represented in this record. Mutations in this gene have been associated with systemic lupus erythematosus (SLE), an autoimmune disease. A recombinant form of this protein is used to treat the one of the symptoms of cystic fibrosis by hydrolyzing the extracellular DNA in sputum and reducing its viscosity. Alternate transcriptional splice variants of this gene have been observed but have not been thoroughly characterized. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000246949
Exo_endo_phos
PF03372
4.9e-08
1
ENSP00000385905
Exo_endo_phos
PF03372
4.9e-08
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
DNASE1-207
ENST00000570769
2732
86aa
ENSP00000458467
DNASE1-213
ENST00000576050
965
60aa
ENSP00000461745
DNASE1-206
ENST00000570761
897
No protein
-
DNASE1-202
ENST00000407479
8552
282aa
ENSP00000385905
DNASE1-201
ENST00000246949
1346
282aa
ENSP00000246949
DNASE1-209
ENST00000571460
1377
60aa
ENSP00000459850
DNASE1-204
ENST00000570520
575
No protein
-
DNASE1-203
ENST00000570376
582
60aa
ENSP00000461725
DNASE1-211
ENST00000573804
525
No protein
-
DNASE1-208
ENST00000570807
766
90aa
ENSP00000458959
DNASE1-210
ENST00000572237
541
75aa
ENSP00000461527
DNASE1-205
ENST00000570664
528
108aa
ENSP00000459507
DNASE1-214
ENST00000576792
580
72aa
ENSP00000461129
DNASE1-212
ENST00000575479
613
65aa
ENSP00000461153
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
34677 Platelet Function Tests 6.8000000E-006 -
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0002283 involved_in neutrophil activation involved in immune response 1 ISS Homo_sapiens(9606) Process GO:0002673 involved_in regulation of acute inflammatory response 1 ISS Homo_sapiens(9606) Process GO:0003677 enables DNA binding 1 IBA Homo_sapiens(9606) Function GO:0003779 enables actin binding 1 IEA Homo_sapiens(9606) Function GO:0004530 enables deoxyribonuclease I activity 1 IBA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005576 located_in extracellular region 1 TAS Homo_sapiens(9606) Component GO:0005634 is_active_in nucleus 1 IBA Homo_sapiens(9606) Component GO:0005635 located_in nuclear envelope 1 IEA Homo_sapiens(9606) Component GO:0006308 involved_in DNA catabolic process 2 IBA,ISS Homo_sapiens(9606) Process GO:0006915 involved_in apoptotic process 1 IEA Homo_sapiens(9606) Process GO:0042588 located_in zymogen granule 1 IEA Homo_sapiens(9606) Component GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component GO:0070948 involved_in regulation of neutrophil mediated cytotoxicity 1 ISS Homo_sapiens(9606) Process
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