Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000213793 Gene ID 388559 Accession 38695
Symbol ZNF888 Alias NA Full Name zinc finger protein 888
Status Confidence Length 19014 bases Strand Minus strand
Position 19 : 52904415 - 52923428 RNA binding domain zf-met
Summary Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000491567 zf-met PF12874 1.3e-15 1
ENSP00000491567 zf-met PF12874 1.3e-15 2
ENSP00000491567 zf-met PF12874 1.3e-15 3
ENSP00000491567 zf-met PF12874 1.3e-15 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ZNF888-202 ENST00000638862 4144 718aa ENSP00000491567
ZNF888-201 ENST00000596623 562 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000213793homo_sapiensENSP0000037566290.537683.6559homo_sapiensENSP0000049156758.635154.1783
ENSG00000213793homo_sapiensENSP0000047038181.609274.3295homo_sapiensENSP0000049156759.331554.039
ENSG00000213793homo_sapiensENSP0000037968979.349969.4073homo_sapiensENSP0000049156757.799450.5571
ENSG00000213793homo_sapiensENSP0000037968481.685673.906homo_sapiensENSP0000049156770.19563.5098
ENSG00000213793homo_sapiensENSP0000041769681.419672.6514homo_sapiensENSP0000049156754.317548.468
ENSG00000213793homo_sapiensENSP0000050766673.726564.3432homo_sapiensENSP0000049156776.601766.8524
ENSG00000213793homo_sapiensENSP0000045921676.271267.6271homo_sapiensENSP0000049156762.674155.571
ENSG00000213793homo_sapiensENSP0000050627376.443168.0187homo_sapiensENSP0000049156768.245160.7242
ENSG00000213793homo_sapiensENSP0000037327473.101364.0823homo_sapiensENSP0000049156764.345456.4067
ENSG00000213793homo_sapiensENSP0000040326672.657462.8264homo_sapiensENSP0000049156765.877456.9638
ENSG00000213793homo_sapiensENSP0000040965265.170954.0598homo_sapiensENSP0000049156742.479135.2368

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000213793homo_sapiensENSP0000049156796.657494.9861nomascus_leucogenysENSNLEP0000000732396.522994.854
ENSG00000213793homo_sapiensENSP0000049156798.328797.7716pan_paniscusENSPPAP0000002407598.328797.7716
ENSG00000213793homo_sapiensENSP0000049156798.607297.9109pan_troglodytesENSPTRP0000008460698.470197.7747
ENSG00000213793homo_sapiensENSP0000049156798.46897.6323gorilla_gorillaENSGGOP0000002203698.33197.4965
ENSG00000213793homo_sapiensENSP0000049156793.593389.8329cercocebus_atysENSCATP0000004039993.463189.7079
ENSG00000213793homo_sapiensENSP0000049156793.45489.5543macaca_fascicularisENSMFAP0000005175993.45489.5543
ENSG00000213793homo_sapiensENSP0000049156789.275884.9582macaca_nemestrinaENSMNEP0000002773690.793286.4023
ENSG00000213793homo_sapiensENSP0000049156710.72428.49582panthera_leoENSPLOP0000002259373.333358.0952
ENSG00000213793homo_sapiensENSP000004915679.470757.93872oryctolagus_cuniculusENSOCUP0000002666864.150953.7736
ENSG00000213793homo_sapiensENSP0000049156710.16717.93872canis_lupus_familiarisENSCAFP0084500652670.873855.3398
ENSG00000213793homo_sapiensENSP0000049156710.44578.77437felis_catusENSFCAP0000004160670.754759.434
ENSG00000213793homo_sapiensENSP0000049156711.42069.7493microcebus_murinusENSMICP0000004180877.358566.0377
ENSG00000213793homo_sapiensENSP000004915679.74937.66017phocoena_sinusENSPSNP0000001825066.037751.8868
ENSG00000213793homo_sapiensENSP0000049156711.559910.1671prolemur_simusENSPSMP0000003542878.301968.8679
ENSG00000213793homo_sapiensENSP0000049156710.02796.40669bos_mutusENSBMUP0000000442152.941233.8235
ENSG00000213793homo_sapiensENSP0000049156754.178342.4791bos_mutusENSBMUP0000001902363.458449.7553
ENSG00000213793homo_sapiensENSP0000049156710.44577.93872neovison_visonENSNVIP0000003032571.428654.2857
ENSG00000213793homo_sapiensENSP0000049156787.047483.1476rhinopithecus_bietiENSRBIP0000003647392.182988.0531
ENSG00000213793homo_sapiensENSP000004915679.888588.21727sciurus_vulgarisENSSVLP0000502702868.93257.2816
ENSG00000213793homo_sapiensENSP0000049156754.874743.1755cervus_hanglu_yarkandensisENSCHYP0000001871563.96150.3247
ENSG00000213793homo_sapiensENSP0000049156752.367740.9471catagonus_wagneriENSCWAP0000000574761.138247.8049
ENSG00000213793homo_sapiensENSP0000049156792.479189.1365rhinopithecus_roxellanaENSRROP0000002556592.350589.0125
ENSG00000213793homo_sapiensENSP0000049156746.657439.415propithecus_coquereliENSPCOP0000001964071.428660.3412
ENSG00000213793homo_sapiensENSP0000049156711.420610.0279propithecus_coquereliENSPCOP0000002662477.358567.9245

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000978enables RNA polymerase II cis-regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0000981enables DNA-binding transcription factor activity, RNA polymerase II-specific1IBAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function

Expression