RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000197746 Gene ID
5660
Accession
9498
Symbol
PSAP
Alias
GLBA;SAP1;SAP2;PSAPD;PARK24
Full Name
prosaposin
Status
Confidence
Length
34954 bases
Strand
Minus strand
Position
10 : 71816298 - 71851251
RNA binding domain
N.A.
Summary
This gene encodes a highly conserved preproprotein that is proteolytically processed to generate four main cleavage products including saposins A, B, C, and D. Each domain of the precursor protein is approximately 80 amino acid residues long with nearly identical placement of cysteine residues and glycosylation sites. Saposins A-D localize primarily to the lysosomal compartment where they facilitate the catabolism of glycosphingolipids with short oligosaccharide groups. The precursor protein exists both as a secretory protein and as an integral membrane protein and has neurotrophic activities. Mutations in this gene have been associated with Gaucher disease and metachromatic leukodystrophy. Alternative splicing results in multiple transcript variants, at least one of which encodes an isoform that is proteolytically processed. [provided by RefSeq, Feb 2016]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
PSAP-201
ENST00000394936
2748
524aa
ENSP00000378394
PSAP-203
ENST00000495196
344
No protein
-
PSAP-202
ENST00000493143
576
No protein
-
PSAP-204
ENST00000633965
500
167aa
ENSP00000488331
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
84828 Asthma 8E-8 23829686
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0002020 enables protease binding 1 IPI Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005543 enables phospholipid binding 1 IDA Homo_sapiens(9606) Function GO:0005576 located_in extracellular region 2 HDA,TAS Homo_sapiens(9606) Component GO:0005615 located_in extracellular space 3 HDA,IDA,ISS Homo_sapiens(9606) Component GO:0005764 is_active_in lysosome 2 IBA,IDA Homo_sapiens(9606) Component GO:0005765 located_in lysosomal membrane 1 TAS Homo_sapiens(9606) Component GO:0005770 located_in late endosome 1 IDA Homo_sapiens(9606) Component GO:0005886 located_in plasma membrane 1 TAS Homo_sapiens(9606) Component GO:0006665 involved_in sphingolipid metabolic process 1 IEA Homo_sapiens(9606) Process GO:0007041 involved_in lysosomal transport 2 IDA,IMP Homo_sapiens(9606) Process GO:0007193 involved_in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway 1 IBA Homo_sapiens(9606) Process GO:0008047 enables enzyme activator activity 1 TAS Homo_sapiens(9606) Function GO:0010506 involved_in regulation of autophagy 1 TAS Homo_sapiens(9606) Process GO:0019216 involved_in regulation of lipid metabolic process 1 IBA Homo_sapiens(9606) Process GO:0035577 located_in azurophil granule membrane 1 TAS Homo_sapiens(9606) Component GO:0042803 enables protein homodimerization activity 1 IDA Homo_sapiens(9606) Function GO:0043202 located_in lysosomal lumen 1 TAS Homo_sapiens(9606) Component GO:0043231 located_in intracellular membrane-bounded organelle 1 IDA Homo_sapiens(9606) Component GO:0060736 involved_in prostate gland growth 1 IBA Homo_sapiens(9606) Process GO:0060742 involved_in epithelial cell differentiation involved in prostate gland development 1 IBA Homo_sapiens(9606) Process GO:0062023 located_in collagen-containing extracellular matrix 1 HDA Homo_sapiens(9606) Component GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component GO:0097110 enables scaffold protein binding 1 IPI Homo_sapiens(9606) Function GO:1903771 involved_in positive regulation of beta-galactosidase activity 1 IDA Homo_sapiens(9606) Process GO:1905572 involved_in ganglioside GM1 transport to membrane 1 IDA Homo_sapiens(9606) Process GO:1905573 enables ganglioside GM1 binding 1 IDA Homo_sapiens(9606) Function GO:1905574 enables ganglioside GM2 binding 1 IDA Homo_sapiens(9606) Function GO:1905575 enables ganglioside GM3 binding 1 IDA Homo_sapiens(9606) Function GO:1905576 enables ganglioside GT1b binding 1 IDA Homo_sapiens(9606) Function GO:1905577 enables ganglioside GP1c binding 1 IDA Homo_sapiens(9606) Function
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