RBP Type
Non-canonical_RBPs
Diseases
SARS-COV-2
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000187244 Gene ID
4059
Accession
6722
Symbol
BCAM
Alias
AU;LU;B-CAM;CD239;MSK19;F8/G253
Full Name
basal cell adhesion molecule (Lutheran blood group)
Status
Confidence
Length
12351 bases
Strand
Plus strand
Position
19 : 44809071 - 44821421
RNA binding domain
N.A.
Summary
This gene encodes Lutheran blood group glycoprotein, a member of the immunoglobulin superfamily and a receptor for the extracellular matrix protein, laminin. The protein contains five extracellular immunoglobulin domains, a single transmembrane domain, and a short C-terminal cytoplasmic tail. This protein may play a role in epithelial cell cancer and in vaso-occlusion of red blood cells in sickle cell disease. Polymorphisms in this gene define some of the antigens in the Lutheran system and also the Auberger system. Inactivating variants of this gene result in the recessive Lutheran null phenotype, Lu(a-b-), of the Lutheran blood group. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
BCAM-209
ENST00000611077
3414
588aa
ENSP00000481153
BCAM-201
ENST00000270233
2409
628aa
ENSP00000270233
BCAM-202
ENST00000588303
914
No protein
-
BCAM-208
ENST00000591520
862
286aa
ENSP00000467100
BCAM-203
ENST00000588603
904
No protein
-
BCAM-206
ENST00000590108
429
No protein
-
BCAM-207
ENST00000590196
518
61aa
ENSP00000468189
BCAM-205
ENST00000589558
611
No protein
-
BCAM-204
ENST00000588714
723
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
22755 Anthropometry 1.9610000E-005 - 103914 Waist-Hip Ratio 4E-6 23192594
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0004888 enables transmembrane signaling receptor activity 1 TAS Homo_sapiens(9606) Function GO:0005055 enables laminin receptor activity 2 IBA,IMP Homo_sapiens(9606) Function GO:0005515 enables protein binding 2 IDA,IPI Homo_sapiens(9606) Function GO:0005576 located_in extracellular region 1 HDA Homo_sapiens(9606) Component GO:0005886 is_active_in plasma membrane 1 IBA Homo_sapiens(9606) Component GO:0007155 involved_in cell adhesion 1 TAS Homo_sapiens(9606) Process GO:0007160 involved_in cell-matrix adhesion 1 IMP Homo_sapiens(9606) Process GO:0007165 involved_in signal transduction 1 TAS Homo_sapiens(9606) Process GO:0009897 located_in external side of plasma membrane 1 IC Homo_sapiens(9606) Component GO:0043236 enables laminin binding 1 IMP Homo_sapiens(9606) Function GO:0062023 located_in collagen-containing extracellular matrix 1 HDA Homo_sapiens(9606) Component GO:0070062 located_in extracellular exosome 1 HDA Homo_sapiens(9606) Component
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