Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000185272 Gene ID 54033 Accession 9897
Symbol RBM11 Alias NA Full Name RNA binding motif protein 11
Status Confidence Length 12216 bases Strand Plus strand
Position 21 : 14216157 - 14228372 RNA binding domain RRM_1
Summary Enables poly(U) RNA binding activity and protein homodimerization activity. Acts upstream of or within cellular response to oxidative stress and regulation of alternative mRNA splicing, via spliceosome. Located in nuclear speck. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000383421 RRM_1 PF00076 4.7e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
21984414 The RNA recognition motif protein RBM11 is a novel tissue-specific splicing regulator. Simona Pedrotti 2012-02-01 Nucleic acids research
37432452 Long-read sequencing reveals the complex structure of extra dic(21;21) chromosome and its biological effects. Kugui Yoshida-Tanaka 2023-09-01 Human genetics

Transcripts

Name Transcript ID bp Protein Translation ID
RBM11-203 ENST00000468643 1992 No protein -
RBM11-204 ENST00000468788 680 No protein -
RBM11-206 ENST00000495055 1597 No protein -
RBM11-202 ENST00000461088 649 No protein -
RBM11-201 ENST00000400577 1955 281aa ENSP00000383421
RBM11-205 ENST00000475864 668 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
46144Platelet Function Tests1.6946400E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000185272homo_sapiensENSP0000036463945.318432.2097homo_sapiensENSP0000038342143.060530.605

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000185272homo_sapiensENSP0000038342199.288397.153nomascus_leucogenysENSNLEP0000000208999.288397.153
ENSG00000185272homo_sapiensENSP0000038342110099.6441pan_paniscusENSPPAP0000002886310099.6441
ENSG00000185272homo_sapiensENSP0000038342184.697583.9858pongo_abeliiENSPPYP0000001260599.581698.7448
ENSG00000185272homo_sapiensENSP0000038342110099.6441pan_troglodytesENSPTRP0000002375210099.6441
ENSG00000185272homo_sapiensENSP0000038342199.644198.9324gorilla_gorillaENSGGOP0000002779599.644198.9324
ENSG00000185272homo_sapiensENSP0000038342162.633552.3132sarcophilus_harrisiiENSSHAP0000002738774.576362.2881
ENSG00000185272homo_sapiensENSP0000038342149.466242.7046notamacropus_eugeniiENSMEUP0000000322561.777853.3333
ENSG00000185272homo_sapiensENSP0000038342170.462665.8363choloepus_hoffmanniENSCHOP0000000692893.396287.2642
ENSG00000185272homo_sapiensENSP0000038342179.003674.0214dasypus_novemcinctusENSDNOP0000002343792.88787.0293
ENSG00000185272homo_sapiensENSP0000038342176.868375.4448callithrix_jacchusENSCJAP0000000587366.666765.4321
ENSG00000185272homo_sapiensENSP0000038342197.508995.0178cercocebus_atysENSCATP0000004152097.508995.0178
ENSG00000185272homo_sapiensENSP0000038342197.508995.3737macaca_fascicularisENSMFAP0000004415697.508995.3737
ENSG00000185272homo_sapiensENSP0000038342197.508995.3737macaca_mulattaENSMMUP0000002643897.508995.3737
ENSG00000185272homo_sapiensENSP0000038342197.508995.3737macaca_nemestrinaENSMNEP0000001338497.508995.3737
ENSG00000185272homo_sapiensENSP0000038342197.15395.0178papio_anubisENSPANP0000005545997.15395.0178
ENSG00000185272homo_sapiensENSP0000038342197.864895.7295mandrillus_leucophaeusENSMLEP0000000924097.864895.7295
ENSG00000185272homo_sapiensENSP0000038342179.359476.1566tursiops_truncatusENSTTRP0000000701194.092890.2954
ENSG00000185272homo_sapiensENSP0000038342177.580173.3096vulpes_vulpesENSVVUP0000003293666.261462.614
ENSG00000185272homo_sapiensENSP0000038342174.377267.6157mus_spretusMGP_SPRETEiJ_P004394787.815179.8319
ENSG00000185272homo_sapiensENSP0000038342178.647776.1566equus_asinusENSEASP0000501978193.248990.2954
ENSG00000185272homo_sapiensENSP0000038342177.935974.3772capra_hircusENSCHIP0000002049289.024484.9594
ENSG00000185272homo_sapiensENSP0000038342176.868371.5303loxodonta_africanaENSLAFP0000000595290.756384.4538
ENSG00000185272homo_sapiensENSP0000038342180.071275.8007panthera_leoENSPLOP0000002260994.936789.8734
ENSG00000185272homo_sapiensENSP0000038342179.359476.1566ailuropoda_melanoleucaENSAMEP0000003830793.697589.916
ENSG00000185272homo_sapiensENSP0000038342177.580174.7331bos_indicus_hybridENSBIXP0000504032963.005860.6936
ENSG00000185272homo_sapiensENSP0000038342171.886168.6833equus_caballusENSECAP0000001303292.237488.1279
ENSG00000185272homo_sapiensENSP0000038342177.935973.6655canis_lupus_familiarisENSCAFP0084503015292.016886.9748
ENSG00000185272homo_sapiensENSP0000038342179.715375.4448panthera_pardusENSPPRP0000000797394.514889.4515
ENSG00000185272homo_sapiensENSP0000038342180.42776.8683marmota_marmota_marmotaENSMMMP0000001907494.95890.7563
ENSG00000185272homo_sapiensENSP0000038342179.003676.1566balaenoptera_musculusENSBMSP0001002190390.243986.9919
ENSG00000185272homo_sapiensENSP0000038342172.953768.6833cavia_porcellusENSCPOP0000000477492.760287.3303
ENSG00000185272homo_sapiensENSP0000038342179.715375.4448felis_catusENSFCAP0000001566094.514889.4515
ENSG00000185272homo_sapiensENSP0000038342178.647775.4448ursus_americanusENSUAMP0000003558192.857189.0756
ENSG00000185272homo_sapiensENSP0000038342177.580174.7331bison_bison_bisonENSBBBP0000002432188.617985.3659
ENSG00000185272homo_sapiensENSP0000038342179.003675.8007monodon_monocerosENSMMNP0001500355290.243986.5854
ENSG00000185272homo_sapiensENSP0000038342179.003675.089sus_scrofaENSSSCP0000004433593.670989.0295
ENSG00000185272homo_sapiensENSP0000038342181.850579.7153microcebus_murinusENSMICP0000003195496.638794.1176
ENSG00000185272homo_sapiensENSP0000038342176.512569.0391jaculus_jaculusENSJJAP0000001779990.336181.5126
ENSG00000185272homo_sapiensENSP0000038342178.291874.3772ovis_aries_rambouilletENSOARP0002000162589.430984.9594
ENSG00000185272homo_sapiensENSP0000038342178.647775.8007delphinapterus_leucasENSDLEP0000001411093.248989.8734
ENSG00000185272homo_sapiensENSP0000038342178.647775.089physeter_catodonENSPCTP0000502834693.248989.0295
ENSG00000185272homo_sapiensENSP0000038342174.021466.9039mus_caroliMGP_CAROLIEiJ_P004206087.39578.9916
ENSG00000185272homo_sapiensENSP0000038342174.377267.2598mus_musculusENSMUSP0000010988787.815179.4118
ENSG00000185272homo_sapiensENSP0000038342149.110346.9751dipodomys_ordiiENSDORP0000000074896.503592.3077
ENSG00000185272homo_sapiensENSP0000038342176.512573.3096mustela_putorius_furoENSMPUP0000001060893.073689.1775
ENSG00000185272homo_sapiensENSP0000038342182.918282.2064aotus_nancymaaeENSANAP0000003334897.899297.0588
ENSG00000185272homo_sapiensENSP0000038342182.562381.1388saimiri_boliviensis_boliviensisENSSBOP0000002513797.890396.2025
ENSG00000185272homo_sapiensENSP0000038342169.39567.2598vicugna_pacosENSVPAP0000000061993.301490.4306
ENSG00000185272homo_sapiensENSP0000038342168.683363.3452tupaia_belangeriENSTBEP0000000356194.607887.2549
ENSG00000185272homo_sapiensENSP0000038342177.935970.1068mesocricetus_auratusENSMAUP0000000671892.016882.7731
ENSG00000185272homo_sapiensENSP0000038342179.359476.1566phocoena_sinusENSPSNP0000001502890.650486.9919
ENSG00000185272homo_sapiensENSP0000038342179.359476.8683camelus_dromedariusENSCDRP0000500684094.092891.1392
ENSG00000185272homo_sapiensENSP0000038342181.138877.5801carlito_syrichtaENSTSYP0000000352895.798391.5966
ENSG00000185272homo_sapiensENSP0000038342179.715375.4448panthera_tigris_altaicaENSPTIP0000001802394.514889.4515
ENSG00000185272homo_sapiensENSP0000038342167.971560.1423rattus_norvegicusENSRNOP0000004662458.054751.3678
ENSG00000185272homo_sapiensENSP0000038342181.138877.9359prolemur_simusENSPSMP0000001938995.798392.0168
ENSG00000185272homo_sapiensENSP0000038342176.156666.9039microtus_ochrogasterENSMOCP0000000492989.91678.9916
ENSG00000185272homo_sapiensENSP0000038342174.733171.1744sorex_araneusENSSARP0000000156288.98384.7458
ENSG00000185272homo_sapiensENSP0000038342177.224268.6833peromyscus_maniculatus_bairdiiENSPEMP0000001800092.340482.1277
ENSG00000185272homo_sapiensENSP0000038342177.224274.0214bos_mutusENSBMUP0000002038662.716860.1156
ENSG00000185272homo_sapiensENSP0000038342174.021466.9039mus_spicilegusENSMSIP0000002748187.39578.9916
ENSG00000185272homo_sapiensENSP0000038342177.580167.9715cricetulus_griseus_chok1gshdENSCGRP0000101188891.596680.2521
ENSG00000185272homo_sapiensENSP0000038342167.259863.7011pteropus_vampyrusENSPVAP0000001306892.647187.7451
ENSG00000185272homo_sapiensENSP0000038342176.868371.5303myotis_lucifugusENSMLUP0000000523087.804981.7073
ENSG00000185272homo_sapiensENSP0000038342138.7929.8932vombatus_ursinusENSVURP0001000273969.426853.5032
ENSG00000185272homo_sapiensENSP0000038342179.715375.089rhinolophus_ferrumequinumENSRFEP0001000678294.514889.0295
ENSG00000185272homo_sapiensENSP0000038342178.291874.3772neovison_visonENSNVIP0000002779392.82788.1857
ENSG00000185272homo_sapiensENSP0000038342177.580174.7331bos_taurusENSBTAP0000004565663.005860.6936
ENSG00000185272homo_sapiensENSP0000038342172.24266.9039heterocephalus_glaber_femaleENSHGLP0000004590882.520376.4228
ENSG00000185272homo_sapiensENSP0000038342197.15395.0178rhinopithecus_bietiENSRBIP0000002495097.15395.0178
ENSG00000185272homo_sapiensENSP0000038342177.935973.6655canis_lupus_dingoENSCAFP0002003420192.016886.9748
ENSG00000185272homo_sapiensENSP0000038342180.782978.2918sciurus_vulgarisENSSVLP0000502223995.378292.437
ENSG00000185272homo_sapiensENSP0000038342163.701150.1779phascolarctos_cinereusENSPCIP0000001693075.847559.7458
ENSG00000185272homo_sapiensENSP0000038342148.042745.5516procavia_capensisENSPCAP0000000778694.405689.5105
ENSG00000185272homo_sapiensENSP0000038342175.444870.1068nannospalax_galiliENSNGAP0000000807090.987184.5494
ENSG00000185272homo_sapiensENSP0000038342177.224274.0214bos_grunniensENSBGRP0000000002862.716860.1156
ENSG00000185272homo_sapiensENSP0000038342180.071275.4448chinchilla_lanigeraENSCLAP0000000766494.537889.0756
ENSG00000185272homo_sapiensENSP0000038342176.156672.242cervus_hanglu_yarkandensisENSCHYP0000003382671.096367.4419
ENSG00000185272homo_sapiensENSP0000038342179.003675.4448catagonus_wagneriENSCWAP0000002437190.243986.1789
ENSG00000185272homo_sapiensENSP0000038342180.071276.1566ictidomys_tridecemlineatusENSSTOP0000002774194.537889.916
ENSG00000185272homo_sapiensENSP0000038342167.259864.7687otolemur_garnettiiENSOGAP0000000515194.591
ENSG00000185272homo_sapiensENSP0000038342182.562381.1388cebus_imitatorENSCCAP0000002565397.47995.7983
ENSG00000185272homo_sapiensENSP0000038342180.42776.1566urocitellus_parryiiENSUPAP0001002451094.95889.916
ENSG00000185272homo_sapiensENSP0000038342177.935974.7331moschus_moschiferusENSMMSP0000001082289.024485.3659
ENSG00000185272homo_sapiensENSP0000038342196.797194.6619rhinopithecus_roxellanaENSRROP0000001097996.797194.6619
ENSG00000185272homo_sapiensENSP0000038342173.665566.1922mus_pahariMGP_PahariEiJ_P002941586.974878.1513
ENSG00000185272homo_sapiensENSP0000038342182.206479.7153propithecus_coquereliENSPCOP0000002397097.058894.1176
ENSG00000185272homo_sapiensENSP0000038342131.316718.1495caenorhabditis_elegansR119.7a.115.09438.74786
ENSG00000185272homo_sapiensENSP0000038342133.807821.7082caenorhabditis_elegansY37D8A.21.139.094725.1029
ENSG00000185272homo_sapiensENSP0000038342129.537418.5053drosophila_melanogasterFBpp007777534.87421.8487
ENSG00000185272homo_sapiensENSP0000038342123.487518.1495petromyzon_marinusENSPMAP0000000167474.157357.3034
ENSG00000185272homo_sapiensENSP0000038342130.960924.911eptatretus_burgeriENSEBUP0000001547157.236846.0526
ENSG00000185272homo_sapiensENSP0000038342123.487518.5053callorhinchus_miliiENSCMIP000000382457559.0909
ENSG00000185272homo_sapiensENSP0000038342152.313240.5694latimeria_chalumnaeENSLACP0000000950262.820548.7179
ENSG00000185272homo_sapiensENSP0000038342145.195732.3843lepisosteus_oculatusENSLOCP000000117845035.8268
ENSG00000185272homo_sapiensENSP0000038342133.096123.1317clupea_harengusENSCHAP0000003301259.615441.6667
ENSG00000185272homo_sapiensENSP0000038342128.469819.9288danio_rerioENSDARP0000012206643.010830.1075
ENSG00000185272homo_sapiensENSP0000038342131.672620.6406carassius_auratusENSCARP0000013025932.1320.9386
ENSG00000185272homo_sapiensENSP0000038342136.298923.4875astyanax_mexicanusENSAMXP0000003488648.341231.2796
ENSG00000185272homo_sapiensENSP0000038342124.199319.573ictalurus_punctatusENSIPUP0000002687972.340458.5106
ENSG00000185272homo_sapiensENSP0000038342125.622820.2847esox_luciusENSELUP0000002195167.289753.271
ENSG00000185272homo_sapiensENSP0000038342126.334520.9964oncorhynchus_mykissENSOMYP0000010233469.811355.6604
ENSG00000185272homo_sapiensENSP0000038342124.555219.573salmo_salarENSSSAP0000000340363.888950.9259
ENSG00000185272homo_sapiensENSP0000038342126.690421.7082salmo_truttaENSSTUP0000001021071.428658.0952
ENSG00000185272homo_sapiensENSP0000038342148.754440.2135xenopus_tropicalisENSXETP0000011692456.378646.5021
ENSG00000185272homo_sapiensENSP0000038342162.277652.669chrysemys_picta_belliiENSCPBP000000413007059.2
ENSG00000185272homo_sapiensENSP0000038342162.633549.4662sphenodon_punctatusENSSPUP0000001512569.291354.7244
ENSG00000185272homo_sapiensENSP0000038342159.430647.331crocodylus_porosusENSCPRP0000501841755.481744.186
ENSG00000185272homo_sapiensENSP0000038342132.028525.6228notechis_scutatusENSNSUP0000002272762.550
ENSG00000185272homo_sapiensENSP0000038342130.60526.3345pseudonaja_textilisENSPTXP0000000592669.354859.6774
ENSG00000185272homo_sapiensENSP0000038342165.124651.2456anas_platyrhynchos_platyrhynchosENSAPLP0000001843569.847354.9618
ENSG00000185272homo_sapiensENSP0000038342159.074744.1281gallus_gallusENSGALP0001001006655.333341.3333
ENSG00000185272homo_sapiensENSP0000038342163.701150.5338meleagris_gallopavoENSMGAP0000002453269.921955.4688
ENSG00000185272homo_sapiensENSP0000038342132.028525.6228serinus_canariaENSSCAP0000002068160.402748.3221
ENSG00000185272homo_sapiensENSP0000038342127.75822.7758parus_majorENSPMJP0000001624668.421156.1404
ENSG00000185272homo_sapiensENSP0000038342153.736741.9929anolis_carolinensisENSACAP0000000044163.983150
ENSG00000185272homo_sapiensENSP0000038342129.181525.6228naja_najaENSNNAP0000002321376.635567.2897
ENSG00000185272homo_sapiensENSP0000038342128.825625.9786podarcis_muralisENSPMRP0000000208180.19872.2772
ENSG00000185272homo_sapiensENSP0000038342138.7930.2491taeniopygia_guttataENSTGUP0000002011968.987353.7975
ENSG00000185272homo_sapiensENSP0000038342148.398635.5872erpetoichthys_calabaricusENSECRP0000002400852.918338.9105
ENSG00000185272homo_sapiensENSP0000038342150.889741.9929salvator_merianaeENSSMRP0000000057150.352141.5493
ENSG00000185272homo_sapiensENSP0000038342163.701154.4484gopherus_evgoodeiENSGEVP0000500326469.921959.7656
ENSG00000185272homo_sapiensENSP0000038342153.024939.1459struthio_camelus_australisENSSCUP0000000041865.638848.4581
ENSG00000185272homo_sapiensENSP0000038342161.565844.8399strigops_habroptilaENSSHBP0000500291167.843149.4118
ENSG00000185272homo_sapiensENSP0000038342129.537427.4021terrapene_carolina_triunguisENSTMTP0000001214669.166764.1667
ENSG00000185272homo_sapiensENSP0000038342126.334521.3523hucho_huchoENSHHUP0000008491456.923146.1538
ENSG00000185272homo_sapiensENSP0000038342123.131719.2171pygocentrus_nattereriENSPNAP0000002460071.428659.3407
ENSG00000185272homo_sapiensENSP0000038342126.334520.9964oncorhynchus_tshawytschaENSOTSP0000501966569.811355.6604
ENSG00000185272homo_sapiensENSP0000038342157.651243.0605aquila_chrysaetos_chrysaetosENSACCP0002001017266.942150
ENSG00000185272homo_sapiensENSP0000038342120.284714.9466cyprinus_carpio_carpioENSCCRP0000016953467.058849.4118
ENSG00000185272homo_sapiensENSP0000038342162.989350.1779coturnix_japonicaENSCJPP0000500448169.140655.0781
ENSG00000185272homo_sapiensENSP0000038342120.640615.6584sinocyclocheilus_grahamiENSSGRP0000002791169.879553.012
ENSG00000185272homo_sapiensENSP0000038342137.366525.6228paramormyrops_kingsleyaeENSPKIP0000000056547.297332.4324
ENSG00000185272homo_sapiensENSP0000038342129.893223.4875scleropages_formosusENSSFOP0001507845661.764748.5294
ENSG00000185272homo_sapiensENSP0000038342142.348831.6726leptobrachium_leishanenseENSLLEP0000002113647.410435.4582

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000381involved_in regulation of alternative mRNA splicing, via spliceosome2IBA,IDAHomo_sapiens(9606)Process
GO:0003727enables single-stranded RNA binding1IBAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus2IBA,IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0006397involved_in mRNA processing1IEAHomo_sapiens(9606)Process
GO:0008266enables poly(U) RNA binding1IDAHomo_sapiens(9606)Function
GO:0008380involved_in RNA splicing1IEAHomo_sapiens(9606)Process
GO:0016607located_in nuclear speck1IDAHomo_sapiens(9606)Component
GO:0030154involved_in cell differentiation1IEAHomo_sapiens(9606)Process
GO:0034599acts_upstream_of_or_within cellular response to oxidative stress1IDAHomo_sapiens(9606)Process
GO:0042803enables protein homodimerization activity1IDAHomo_sapiens(9606)Function

Expression