RBP Type
Non-canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Stress granucle Nucleoli Nucleoli rim
BulkPerturb-seq
N.A.
Ensembl ID ENSG00000184897 Gene ID
8971
Accession
4722
Symbol
H1-10
Alias
H1X;H1FX;H1.10
Full Name
H1.10 linker histone
Status
Confidence
Length
1516 bases
Strand
Minus strand
Position
3 : 129314771 - 129316286
RNA binding domain
N.A.
Summary
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene encodes a replication-independent histone that is a member of the histone H1 family. [provided by RefSeq, Oct 2015]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
H1-10-201
ENST00000333762
1516
213aa
ENSP00000329662
H1-10-202
ENST00000704995
1516
264aa
ENSP00000516065
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000184897 homo_sapiens ENSP00000344504 41.2371 27.8351 homo_sapiens ENSP00000329662 37.5587 25.3521 ENSG00000184897 homo_sapiens ENSP00000339566 46.4789 32.8638 homo_sapiens ENSP00000329662 46.4789 32.8638 ENSG00000184897 homo_sapiens ENSP00000341214 40.5797 22.7053 homo_sapiens ENSP00000329662 39.4366 22.0657 ENSG00000184897 homo_sapiens ENSP00000319799 26.0116 15.3179 homo_sapiens ENSP00000329662 42.2535 24.8826 ENSG00000184897 homo_sapiens ENSP00000334805 27.0588 13.7255 homo_sapiens ENSP00000329662 32.3944 16.4319 ENSG00000184897 homo_sapiens ENSP00000244573 47.4419 34.4186 homo_sapiens ENSP00000329662 47.8873 34.7418 ENSG00000184897 homo_sapiens ENSP00000330074 46.0177 33.6283 homo_sapiens ENSP00000329662 48.8263 35.6808 ENSG00000184897 homo_sapiens ENSP00000307705 48.4018 34.7032 homo_sapiens ENSP00000329662 49.7653 35.6808 ENSG00000184897 homo_sapiens ENSP00000244534 47.5113 33.4842 homo_sapiens ENSP00000329662 49.2958 34.7418
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000184897 homo_sapiens ENSP00000329662 97.6526 97.1831 nomascus_leucogenys ENSNLEP00000023139 98.5782 98.1043 ENSG00000184897 homo_sapiens ENSP00000329662 99.5305 99.5305 pongo_abelii ENSPPYP00000015008 99.5305 99.5305 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 pan_troglodytes ENSPTRP00000026485 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 99.5305 99.061 gorilla_gorilla ENSGGOP00000016517 99.5305 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 80.7512 72.77 notamacropus_eugenii ENSMEUP00000012488 82.2967 74.1627 ENSG00000184897 homo_sapiens ENSP00000329662 70.4225 62.4413 dasypus_novemcinctus ENSDNOP00000018473 71.7703 63.6364 ENSG00000184897 homo_sapiens ENSP00000329662 78.4038 74.6479 echinops_telfairi ENSETEP00000010912 83.5 79.5 ENSG00000184897 homo_sapiens ENSP00000329662 97.6526 97.6526 callithrix_jacchus ENSCJAP00000065253 97.1963 97.1963 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 cercocebus_atys ENSCATP00000000473 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 macaca_mulatta ENSMMUP00000056104 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 macaca_nemestrina ENSMNEP00000005604 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 papio_anubis ENSPANP00000010669 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 92.4883 89.6714 vulpes_vulpes ENSVVUP00000024978 92.4883 89.6714 ENSG00000184897 homo_sapiens ENSP00000329662 77.4648 69.4836 mus_spretus MGP_SPRETEiJ_P0077868 87.766 78.7234 ENSG00000184897 homo_sapiens ENSP00000329662 86.8545 83.5681 equus_asinus ENSEASP00005043593 41.9501 40.3628 ENSG00000184897 homo_sapiens ENSP00000329662 94.8357 92.0188 panthera_leo ENSPLOP00000005149 95.283 92.4528 ENSG00000184897 homo_sapiens ENSP00000329662 64.7887 56.338 ailuropoda_melanoleuca ENSAMEP00000034708 32.6241 28.3688 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 91.0798 bos_indicus_hybrid ENSBIXP00005045221 93.4579 90.6542 ENSG00000184897 homo_sapiens ENSP00000329662 86.8545 83.5681 equus_caballus ENSECAP00000061412 46.4824 44.7236 ENSG00000184897 homo_sapiens ENSP00000329662 92.0188 89.2019 canis_lupus_familiaris ENSCAFP00845027215 92.0188 89.2019 ENSG00000184897 homo_sapiens ENSP00000329662 95.3052 92.4883 panthera_pardus ENSPPRP00000019754 95.3052 92.4883 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 90.1408 balaenoptera_musculus ENSBMSP00010017181 93.8967 90.1408 ENSG00000184897 homo_sapiens ENSP00000329662 68.0751 61.9718 cavia_porcellus ENSCPOP00000020611 78.3784 71.3513 ENSG00000184897 homo_sapiens ENSP00000329662 95.3052 92.4883 felis_catus ENSFCAP00000044158 95.3052 92.4883 ENSG00000184897 homo_sapiens ENSP00000329662 96.2441 93.4272 ursus_americanus ENSUAMP00000024257 96.2441 93.4272 ENSG00000184897 homo_sapiens ENSP00000329662 79.8122 71.831 monodelphis_domestica ENSMODP00000010131 74.2358 66.8122 ENSG00000184897 homo_sapiens ENSP00000329662 92.4883 89.6714 bison_bison_bison ENSBBBP00000024638 92.4883 89.6714 ENSG00000184897 homo_sapiens ENSP00000329662 93.4272 89.6714 monodon_monoceros ENSMMNP00015018175 93.4272 89.6714 ENSG00000184897 homo_sapiens ENSP00000329662 92.4883 89.6714 sus_scrofa ENSSSCP00000081316 92.0561 89.2523 ENSG00000184897 homo_sapiens ENSP00000329662 69.4836 61.9718 microcebus_murinus ENSMICP00000050080 71.4976 63.7681 ENSG00000184897 homo_sapiens ENSP00000329662 93.4272 90.6103 ovis_aries_rambouillet ENSOARP00020021293 92.9907 90.1869 ENSG00000184897 homo_sapiens ENSP00000329662 93.4272 89.6714 delphinapterus_leucas ENSDLEP00000014226 93.4272 89.6714 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 90.1408 physeter_catodon ENSPCTP00005019972 93.8967 90.1408 ENSG00000184897 homo_sapiens ENSP00000329662 76.9953 69.4836 mus_caroli MGP_CAROLIEiJ_P0074887 87.234 78.7234 ENSG00000184897 homo_sapiens ENSP00000329662 76.9953 69.4836 mus_musculus ENSMUSP00000159534 68.6192 61.9247 ENSG00000184897 homo_sapiens ENSP00000329662 96.7136 96.2441 aotus_nancymaae ENSANAP00000001092 96.2617 95.7944 ENSG00000184897 homo_sapiens ENSP00000329662 92.9577 92.4883 saimiri_boliviensis_boliviensis ENSSBOP00000005872 96.5854 96.0976 ENSG00000184897 homo_sapiens ENSP00000329662 99.061 99.061 chlorocebus_sabaeus ENSCSAP00000018331 99.061 99.061 ENSG00000184897 homo_sapiens ENSP00000329662 76.0563 68.5446 mesocricetus_auratus ENSMAUP00000008636 87.0968 78.4946 ENSG00000184897 homo_sapiens ENSP00000329662 93.4272 89.6714 phocoena_sinus ENSPSNP00000031497 93.4272 89.6714 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 90.6103 camelus_dromedarius ENSCDRP00005014936 93.8967 90.6103 ENSG00000184897 homo_sapiens ENSP00000329662 76.5258 68.5446 rattus_norvegicus ENSRNOP00000032882 84.8958 76.0417 ENSG00000184897 homo_sapiens ENSP00000329662 69.953 62.9108 prolemur_simus ENSPSMP00000002480 72.3301 65.0485 ENSG00000184897 homo_sapiens ENSP00000329662 71.3615 64.7887 peromyscus_maniculatus_bairdii ENSPEMP00000036094 86.3636 78.4091 ENSG00000184897 homo_sapiens ENSP00000329662 75.1174 68.5446 cricetulus_griseus_chok1gshd ENSCGRP00001015436 86.0215 78.4946 ENSG00000184897 homo_sapiens ENSP00000329662 80.7512 70.4225 vombatus_ursinus ENSVURP00010021679 75.1092 65.5022 ENSG00000184897 homo_sapiens ENSP00000329662 90.6103 85.446 rhinolophus_ferrumequinum ENSRFEP00010009047 91.9048 86.6667 ENSG00000184897 homo_sapiens ENSP00000329662 95.3052 92.4883 neovison_vison ENSNVIP00000023659 95.3052 92.4883 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 91.0798 bos_taurus ENSBTAP00000049910 93.4579 90.6542 ENSG00000184897 homo_sapiens ENSP00000329662 99.5305 99.5305 rhinopithecus_bieti ENSRBIP00000005763 99.5305 99.5305 ENSG00000184897 homo_sapiens ENSP00000329662 92.0188 89.2019 canis_lupus_dingo ENSCAFP00020005943 92.0188 89.2019 ENSG00000184897 homo_sapiens ENSP00000329662 82.6291 73.7089 sciurus_vulgaris ENSSVLP00005015811 81.8605 73.0233 ENSG00000184897 homo_sapiens ENSP00000329662 83.0986 72.77 phascolarctos_cinereus ENSPCIP00000000340 79.7297 69.8198 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 91.0798 bos_grunniens ENSBGRP00000020854 49.14 47.6658 ENSG00000184897 homo_sapiens ENSP00000329662 80.2817 72.3005 chinchilla_lanigera ENSCLAP00000012057 87.6923 78.9744 ENSG00000184897 homo_sapiens ENSP00000329662 92.4883 89.2019 cervus_hanglu_yarkandensis ENSCHYP00000028284 92.4883 89.2019 ENSG00000184897 homo_sapiens ENSP00000329662 92.0188 88.7324 catagonus_wagneri ENSCWAP00000025382 91.5888 88.3178 ENSG00000184897 homo_sapiens ENSP00000329662 92.0188 88.7324 otolemur_garnettii ENSOGAP00000016829 87.8924 84.7534 ENSG00000184897 homo_sapiens ENSP00000329662 97.6526 97.6526 cebus_imitator ENSCCAP00000002119 97.1963 97.1963 ENSG00000184897 homo_sapiens ENSP00000329662 74.1784 67.6056 urocitellus_parryii ENSUPAP00010005982 72.8111 66.3594 ENSG00000184897 homo_sapiens ENSP00000329662 93.8967 91.0798 moschus_moschiferus ENSMMSP00000031585 93.4579 90.6542 ENSG00000184897 homo_sapiens ENSP00000329662 97.6526 97.1831 rhinopithecus_roxellana ENSRROP00000001604 99.5215 99.0431 ENSG00000184897 homo_sapiens ENSP00000329662 76.9953 69.4836 mus_pahari MGP_PahariEiJ_P0051019 86.7725 78.3069 ENSG00000184897 homo_sapiens ENSP00000329662 75.1174 68.0751 propithecus_coquereli ENSPCOP00000004120 79.2079 71.7822 ENSG00000184897 homo_sapiens ENSP00000329662 33.8028 26.7606 caenorhabditis_elegans F59A7.4.1 37.8947 30 ENSG00000184897 homo_sapiens ENSP00000329662 36.1502 28.169 caenorhabditis_elegans Y73B6BL.9a.1 40.3141 31.4136 ENSG00000184897 homo_sapiens ENSP00000329662 40.8451 31.4554 caenorhabditis_elegans F22F1.1.1 41.8269 32.2115 ENSG00000184897 homo_sapiens ENSP00000329662 43.662 28.6385 caenorhabditis_elegans C18G1.5.1 36.7589 24.1107 ENSG00000184897 homo_sapiens ENSP00000329662 40.8451 29.5775 caenorhabditis_elegans B0414.3.1 38.6667 28 ENSG00000184897 homo_sapiens ENSP00000329662 48.8263 35.2113 eptatretus_burgeri ENSEBUP00000023559 49.7608 35.8852 ENSG00000184897 homo_sapiens ENSP00000329662 44.6009 35.2113 callorhinchus_milii ENSCMIP00000047391 56.213 44.3787 ENSG00000184897 homo_sapiens ENSP00000329662 52.1127 45.0704 latimeria_chalumnae ENSLACP00000018145 51.8692 44.8598 ENSG00000184897 homo_sapiens ENSP00000329662 56.8075 46.9484 latimeria_chalumnae ENSLACP00000023545 36.4458 30.1205 ENSG00000184897 homo_sapiens ENSP00000329662 60.5634 47.8873 clupea_harengus ENSCHAP00000040151 56.3319 44.5415 ENSG00000184897 homo_sapiens ENSP00000329662 53.5211 43.1925 danio_rerio ENSDARP00000070677 59.375 47.9167 ENSG00000184897 homo_sapiens ENSP00000329662 55.3991 44.6009 carassius_auratus ENSCARP00000109741 57.8431 46.5686 ENSG00000184897 homo_sapiens ENSP00000329662 53.9906 43.1925 astyanax_mexicanus ENSAMXP00000047864 55.5556 44.4444 ENSG00000184897 homo_sapiens ENSP00000329662 55.8685 45.0704 ictalurus_punctatus ENSIPUP00000025396 58.6207 47.2906 ENSG00000184897 homo_sapiens ENSP00000329662 52.5822 38.9671 esox_lucius ENSELUP00000016950 59.2593 43.9153 ENSG00000184897 homo_sapiens ENSP00000329662 51.6432 40.8451 electrophorus_electricus ENSEEEP00000018168 58.8235 46.5241 ENSG00000184897 homo_sapiens ENSP00000329662 53.9906 40.8451 oncorhynchus_kisutch ENSOKIP00005013499 59.8958 45.3125 ENSG00000184897 homo_sapiens ENSP00000329662 56.8075 42.2535 oncorhynchus_mykiss ENSOMYP00000119098 62.3711 46.3918 ENSG00000184897 homo_sapiens ENSP00000329662 55.8685 41.3146 salmo_salar ENSSSAP00000149353 65.7459 48.6188 ENSG00000184897 homo_sapiens ENSP00000329662 56.338 42.2535 salmo_trutta ENSSTUP00000048762 61.5385 46.1538 ENSG00000184897 homo_sapiens ENSP00000329662 67.6056 57.277 xenopus_tropicalis ENSXETP00000117884 61.5385 52.1368 ENSG00000184897 homo_sapiens ENSP00000329662 77.4648 68.5446 chrysemys_picta_bellii ENSCPBP00000019933 76.0369 67.2811 ENSG00000184897 homo_sapiens ENSP00000329662 76.0563 68.5446 crocodylus_porosus ENSCPRP00005026199 73.3032 66.0633 ENSG00000184897 homo_sapiens ENSP00000329662 73.7089 66.6667 laticauda_laticaudata ENSLLTP00000006245 64.876 58.6777 ENSG00000184897 homo_sapiens ENSP00000329662 74.1784 66.6667 notechis_scutatus ENSNSUP00000028523 70.2222 63.1111 ENSG00000184897 homo_sapiens ENSP00000329662 75.1174 67.6056 pseudonaja_textilis ENSPTXP00000004835 71.4286 64.2857 ENSG00000184897 homo_sapiens ENSP00000329662 67.1361 57.7465 gallus_gallus ENSGALP00010040403 35.5721 30.597 ENSG00000184897 homo_sapiens ENSP00000329662 54.4601 51.1737 meleagris_gallopavo ENSMGAP00000020392 84.058 78.9855 ENSG00000184897 homo_sapiens ENSP00000329662 53.9906 51.1737 serinus_canaria ENSSCAP00000002644 81.5603 77.305 ENSG00000184897 homo_sapiens ENSP00000329662 75.5869 68.5446 parus_major ENSPMJP00000016985 73.8532 66.9725 ENSG00000184897 homo_sapiens ENSP00000329662 73.2394 67.1361 podarcis_muralis ENSPMRP00000016453 69.6429 63.8393 ENSG00000184897 homo_sapiens ENSP00000329662 73.2394 67.1361 taeniopygia_guttata ENSTGUP00000033746 72.5581 66.5116 ENSG00000184897 homo_sapiens ENSP00000329662 61.9718 51.6432 erpetoichthys_calabaricus ENSECRP00000033534 66.6667 55.5556 ENSG00000184897 homo_sapiens ENSP00000329662 73.2394 66.6667 salvator_merianae ENSSMRP00000027384 69.0266 62.8319 ENSG00000184897 homo_sapiens ENSP00000329662 68.0751 57.277 pelodiscus_sinensis ENSPSIP00000001738 76.7196 64.5503 ENSG00000184897 homo_sapiens ENSP00000329662 76.9953 68.5446 gopherus_evgoodei ENSGEVP00005028349 75.576 67.2811 ENSG00000184897 homo_sapiens ENSP00000329662 77.4648 69.0141 chelonoidis_abingdonii ENSCABP00000006813 76.0369 67.7419 ENSG00000184897 homo_sapiens ENSP00000329662 69.0141 59.1549 anser_brachyrhynchus ENSABRP00000010573 64.1921 55.0218 ENSG00000184897 homo_sapiens ENSP00000329662 76.5258 69.4836 strigops_habroptila ENSSHBP00005021976 74.7706 67.8899 ENSG00000184897 homo_sapiens ENSP00000329662 76.5258 68.0751 terrapene_carolina_triunguis ENSTMTP00000014768 75.1152 66.8203 ENSG00000184897 homo_sapiens ENSP00000329662 54.9296 40.8451 hucho_hucho ENSHHUP00000076513 60 44.6154 ENSG00000184897 homo_sapiens ENSP00000329662 56.8075 48.8263 pygocentrus_nattereri ENSPNAP00000010978 59.6059 51.2315 ENSG00000184897 homo_sapiens ENSP00000329662 55.3991 42.2535 oncorhynchus_tshawytscha ENSOTSP00005057156 61.4583 46.875 ENSG00000184897 homo_sapiens ENSP00000329662 76.9953 69.4836 aquila_chrysaetos_chrysaetos ENSACCP00020013181 74.8858 67.5799 ENSG00000184897 homo_sapiens ENSP00000329662 44.1315 34.7418 denticeps_clupeoides ENSDCDP00000003180 65.2778 51.3889 ENSG00000184897 homo_sapiens ENSP00000329662 72.3005 65.2582 ficedula_albicollis ENSFALP00000017313 53.8462 48.6014 ENSG00000184897 homo_sapiens ENSP00000329662 54.9296 44.1315 cyprinus_carpio_carpio ENSCCRP00000129326 57.0732 45.8537 ENSG00000184897 homo_sapiens ENSP00000329662 74.6479 67.6056 coturnix_japonica ENSCJPP00005017037 73.9535 66.9767 ENSG00000184897 homo_sapiens ENSP00000329662 55.3991 44.1315 sinocyclocheilus_grahami ENSSGRP00000058567 59 47 ENSG00000184897 homo_sapiens ENSP00000329662 56.338 45.0704 sinocyclocheilus_grahami ENSSGRP00000061376 58.8235 47.0588 ENSG00000184897 homo_sapiens ENSP00000329662 56.8075 45.0704 paramormyrops_kingsleyae ENSPKIP00000008059 60.5 48 ENSG00000184897 homo_sapiens ENSP00000329662 59.6244 46.0094 paramormyrops_kingsleyae ENSPKIP00000010701 64.467 49.7462 ENSG00000184897 homo_sapiens ENSP00000329662 62.4413 49.7653 scleropages_formosus ENSSFOP00015033207 54.065 43.0894 ENSG00000184897 homo_sapiens ENSP00000329662 61.5023 48.8263 scleropages_formosus ENSSFOP00015060824 53.252 42.2764 ENSG00000184897 homo_sapiens ENSP00000329662 56.338 45.5399 leptobrachium_leishanense ENSLLEP00000022848 65.2174 52.7174
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000786 part_of nucleosome 1 IEA Homo_sapiens(9606) Component GO:0003690 enables double-stranded DNA binding 1 IBA Homo_sapiens(9606) Function GO:0003723 enables RNA binding 1 HDA Homo_sapiens(9606) Function GO:0005634 is_active_in nucleus 1 IBA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 1 IDA Homo_sapiens(9606) Component GO:0005730 located_in nucleolus 1 IDA Homo_sapiens(9606) Component GO:0006334 involved_in nucleosome assembly 1 IEA Homo_sapiens(9606) Process GO:0030261 involved_in chromosome condensation 1 IBA Homo_sapiens(9606) Process GO:0030527 enables structural constituent of chromatin 1 IEA Homo_sapiens(9606) Function GO:0031492 enables nucleosomal DNA binding 1 IBA Homo_sapiens(9606) Function GO:0045296 enables cadherin binding 1 HDA Homo_sapiens(9606) Function GO:0045910 involved_in negative regulation of DNA recombination 1 IBA Homo_sapiens(9606) Process
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