RBP Type
Canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
mRNA
Moonlighting functions
N.A.
Localizations
Nucleoli
BulkPerturb-seq
N.A.
Ensembl ID ENSG00000184735 Gene ID
168400
Accession
20083
Symbol
DDX53
Alias
CAGE;CT26
Full Name
DEAD-box helicase 53
Status
Confidence
Length
3630 bases
Strand
Plus strand
Position
X : 22999960 - 23003589
RNA binding domain
DEAD , KH_1
Summary
This intronless gene encodes a protein which contains several domains found in members of the DEAD-box helicase protein family. Other members of this protein family participate in ATP-dependent RNA unwinding. [provided by RefSeq, Sep 2011]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000368667
DEAD
PF00270
1.6e-42
1
ENSP00000368667
KH_1
PF00013
8.7e-11
2
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
32077621
Glycyrrhizic-Acid-Based Carbon Dots with High Antiviral Activity by Multisite Inhibition Mechanisms.
Ting Tong
2020-04-01
Small (Weinheim an der Bergstrasse, Germany)
Name
Transcript ID
bp
Protein
Translation ID
DDX53-201
ENST00000327968
3630
631aa
ENSP00000368667
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000184735 homo_sapiens ENSP00000379475 48.5981 25.2336 homo_sapiens ENSP00000368667 32.9636 17.1157 ENSG00000184735 homo_sapiens ENSP00000385536 39.9177 28.8066 homo_sapiens ENSP00000368667 46.1173 33.2805 ENSG00000184735 homo_sapiens ENSP00000263239 34.4776 19.403 homo_sapiens ENSP00000368667 36.6086 20.6022 ENSG00000184735 homo_sapiens ENSP00000497641 46.7153 28.2238 homo_sapiens ENSP00000368667 30.4279 18.3835 ENSG00000184735 homo_sapiens ENSP00000482680 31.634 18.5621 homo_sapiens ENSP00000368667 38.3518 22.504 ENSG00000184735 homo_sapiens ENSP00000293831 48.7685 29.064 homo_sapiens ENSP00000368667 31.3788 18.7005 ENSG00000184735 homo_sapiens ENSP00000306117 41.2134 21.7573 homo_sapiens ENSP00000368667 31.2203 16.4818 ENSG00000184735 homo_sapiens ENSP00000288071 41.1273 21.7119 homo_sapiens ENSP00000368667 31.2203 16.4818 ENSG00000184735 homo_sapiens ENSP00000481495 28.1723 15.9488 homo_sapiens ENSP00000368667 38.3518 21.7116 ENSG00000184735 homo_sapiens ENSP00000416534 29.0698 17.0543 homo_sapiens ENSP00000368667 47.5436 27.8922 ENSG00000184735 homo_sapiens ENSP00000361232 29.3566 16.3539 homo_sapiens ENSP00000368667 34.7068 19.3344 ENSG00000184735 homo_sapiens ENSP00000492643 15.188 7.89474 homo_sapiens ENSP00000368667 32.0127 16.6403 ENSG00000184735 homo_sapiens ENSP00000238146 31.6667 18.5 homo_sapiens ENSP00000368667 30.1109 17.5911 ENSG00000184735 homo_sapiens ENSP00000225792 47.557 33.7134 homo_sapiens ENSP00000368667 46.2758 32.8051 ENSG00000184735 homo_sapiens ENSP00000330460 38.7722 21.0016 homo_sapiens ENSP00000368667 38.0349 20.6022 ENSG00000184735 homo_sapiens ENSP00000263576 37.4741 21.5321 homo_sapiens ENSP00000368667 28.6846 16.4818 ENSG00000184735 homo_sapiens ENSP00000380495 30.6306 17.2673 homo_sapiens ENSP00000368667 32.3296 18.225 ENSG00000184735 homo_sapiens ENSP00000314348 23.5429 13.7143 homo_sapiens ENSP00000368667 32.6466 19.0174 ENSG00000184735 homo_sapiens ENSP00000346120 31.0345 18.1354 homo_sapiens ENSP00000368667 38.5103 22.504 ENSG00000184735 homo_sapiens ENSP00000374574 33.049 19.936 homo_sapiens ENSP00000368667 49.1284 29.6355 ENSG00000184735 homo_sapiens ENSP00000358716 23.7864 13.835 homo_sapiens ENSP00000368667 31.0618 18.0666 ENSG00000184735 homo_sapiens ENSP00000442266 41.2008 24.4306 homo_sapiens ENSP00000368667 31.5372 18.7005 ENSG00000184735 homo_sapiens ENSP00000362687 30.6649 17.232 homo_sapiens ENSP00000368667 35.8162 20.1268 ENSG00000184735 homo_sapiens ENSP00000479504 39.7329 23.7062 homo_sapiens ENSP00000368667 37.7179 22.504 ENSG00000184735 homo_sapiens ENSP00000359361 74.6914 59.1049 homo_sapiens ENSP00000368667 76.7036 60.6973 ENSG00000184735 homo_sapiens ENSP00000326381 48.403 29.2383 homo_sapiens ENSP00000368667 31.2203 18.859 ENSG00000184735 homo_sapiens ENSP00000258772 33.638 18.83 homo_sapiens ENSP00000368667 29.1601 16.3233 ENSG00000184735 homo_sapiens ENSP00000494040 38.0665 23.2628 homo_sapiens ENSP00000368667 39.9366 24.4057 ENSG00000184735 homo_sapiens ENSP00000336725 38.0303 22.7273 homo_sapiens ENSP00000368667 39.7781 23.7718 ENSG00000184735 homo_sapiens ENSP00000247003 40.9938 24.4306 homo_sapiens ENSP00000368667 31.3788 18.7005 ENSG00000184735 homo_sapiens ENSP00000330349 37.7813 24.9196 homo_sapiens ENSP00000368667 37.2425 24.5642 ENSG00000184735 homo_sapiens ENSP00000242776 48.7119 25.5269 homo_sapiens ENSP00000368667 32.9636 17.2742 ENSG00000184735 homo_sapiens ENSP00000233084 30.2703 16.0811 homo_sapiens ENSP00000368667 35.4992 18.859 ENSG00000184735 homo_sapiens ENSP00000304072 27.3553 14.5289 homo_sapiens ENSP00000368667 38.1933 20.2853 ENSG00000184735 homo_sapiens ENSP00000350698 42.6374 27.2527 homo_sapiens ENSP00000368667 30.7449 19.6513 ENSG00000184735 homo_sapiens ENSP00000310723 31.9512 18.9024 homo_sapiens ENSP00000368667 41.5214 24.5642 ENSG00000184735 homo_sapiens ENSP00000332340 38.3333 22.2222 homo_sapiens ENSP00000368667 32.8051 19.0174 ENSG00000184735 homo_sapiens ENSP00000424838 34.6685 21.547 homo_sapiens ENSP00000368667 39.7781 24.7227
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000184735 homo_sapiens ENSP00000368667 98.2567 96.8304 pan_paniscus ENSPPAP00000001516 98.2567 96.8304 ENSG00000184735 homo_sapiens ENSP00000368667 96.038 94.7702 pongo_abelii ENSPPYP00000022587 96.3434 95.0715 ENSG00000184735 homo_sapiens ENSP00000368667 98.2567 96.5135 pan_troglodytes ENSPTRP00000047475 98.2567 96.5135 ENSG00000184735 homo_sapiens ENSP00000368667 93.9778 90.1743 macaca_fascicularis ENSMFAP00000052478 93.8291 90.0316 ENSG00000184735 homo_sapiens ENSP00000368667 93.8193 90.0158 macaca_mulatta ENSMMUP00000065227 93.6709 89.8734 ENSG00000184735 homo_sapiens ENSP00000368667 93.1854 88.9065 papio_anubis ENSPANP00000055926 93.038 88.7658 ENSG00000184735 homo_sapiens ENSP00000368667 93.8193 89.6989 chlorocebus_sabaeus ENSCSAP00000019039 93.6709 89.557 ENSG00000184735 homo_sapiens ENSP00000368667 81.2995 68.3043 cervus_hanglu_yarkandensis ENSCHYP00000034059 81.0427 68.0885 ENSG00000184735 homo_sapiens ENSP00000368667 88.1141 81.6165 cebus_imitator ENSCCAP00000012745 88.535 82.0064 ENSG00000184735 homo_sapiens ENSP00000368667 88.1141 81.6165 cebus_imitator ENSCCAP00000007549 88.535 82.0064
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003723 enables RNA binding 1 IBA Homo_sapiens(9606) Function GO:0003724 enables RNA helicase activity 1 IBA Homo_sapiens(9606) Function GO:0005524 enables ATP binding 1 IEA Homo_sapiens(9606) Function GO:0005654 located_in nucleoplasm 1 IDA Homo_sapiens(9606) Component GO:0005730 located_in nucleolus 1 IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 IDA Homo_sapiens(9606) Component GO:0016887 enables ATP hydrolysis activity 1 IEA Homo_sapiens(9606) Function GO:0043231 located_in intracellular membrane-bounded organelle 1 IDA Homo_sapiens(9606) Component
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.