Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Transmemebrane
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000181552 Gene ID 64184 Accession 19223
Symbol EDDM3B Alias EP3B;HE3B;RAM2;FAM12B;HE3-BETA Full Name epididymal protein 3B
Status Confidence Length 2545 bases Strand Plus strand
Position 14 : 20768404 - 20770948 RNA binding domain RnaseA
Summary Testicular sperm are morphologically differentiated but are not progressively motile nor able to fertilize an egg. Post-testicular maturation requires exposure of spermatozoa to the microenvironment of the epididymal lumen. Spermatozoa undergo extensive changes in the epididymis, including enzymatic modifications, loss of pre-existing components and addition of new glycoproteins from epididymal secretions. These modifying proteins and enzymes are synthesized by epithelial cells lining the epididymal duct and secreted apically into the lumen, where they come into contact with, and may be absorbed onto, the sperm membranes. The proteins encoded by the genes in this cluster are synthesized and secreted by epididymal epithelial cells. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000314810 RnaseA PF00074 1.2e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EDDM3B-201 ENST00000326783 919 147aa ENSP00000314810

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000181552homo_sapiensENSP0000031509878.911668.7075homo_sapiensENSP0000031481078.911668.7075

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000181552homo_sapiensENSP0000031481097.959295.2381nomascus_leucogenysENSNLEP0000004810497.959295.2381
ENSG00000181552homo_sapiensENSP0000031481097.959296.5986nomascus_leucogenysENSNLEP0000004787097.959296.5986
ENSG00000181552homo_sapiensENSP0000031481099.319798.6395pan_paniscusENSPPAP0000001957899.319798.6395
ENSG00000181552homo_sapiensENSP0000031481098.639597.2789pongo_abeliiENSPPYP0000000634498.639597.2789
ENSG00000181552homo_sapiensENSP0000031481099.319798.6395pan_troglodytesENSPTRP0000001035799.319798.6395
ENSG00000181552homo_sapiensENSP0000031481098.639597.2789gorilla_gorillaENSGGOP0000001127398.639597.2789
ENSG00000181552homo_sapiensENSP0000031481061.224542.8571sarcophilus_harrisiiENSSHAP0000000697361.643843.1507
ENSG00000181552homo_sapiensENSP0000031481058.503440.1361notamacropus_eugeniiENSMEUP0000001374961.428642.1429
ENSG00000181552homo_sapiensENSP0000031481076.870855.102choloepus_hoffmanniENSCHOP0000001005777.397355.4795
ENSG00000181552homo_sapiensENSP0000031481057.823138.0952dasypus_novemcinctusENSDNOP0000002632477.981751.3761
ENSG00000181552homo_sapiensENSP0000031481070.748354.4218erinaceus_europaeusENSEEUP0000000449171.232954.7945
ENSG00000181552homo_sapiensENSP0000031481062.58546.2585echinops_telfairiENSETEP0000000911263.448346.8966
ENSG00000181552homo_sapiensENSP0000031481097.278995.2381cercocebus_atysENSCATP0000000769197.278995.2381
ENSG00000181552homo_sapiensENSP0000031481096.598694.5578macaca_fascicularisENSMFAP0000005011596.598694.5578
ENSG00000181552homo_sapiensENSP0000031481096.598694.5578macaca_mulattaENSMMUP0000000222296.598694.5578
ENSG00000181552homo_sapiensENSP0000031481097.959295.9184mandrillus_leucophaeusENSMLEP0000000682397.959295.9184
ENSG00000181552homo_sapiensENSP0000031481071.428652.381vulpes_vulpesENSVVUP0000001228864.814847.5309
ENSG00000181552homo_sapiensENSP0000031481074.149754.4218mus_spretusMGP_SPRETEiJ_P003822373.154453.6913
ENSG00000181552homo_sapiensENSP0000031481078.231359.1837equus_asinusENSEASP0000504051779.310360
ENSG00000181552homo_sapiensENSP0000031481072.108850.3401loxodonta_africanaENSLAFP0000002752172.602750.6849
ENSG00000181552homo_sapiensENSP0000031481073.469453.0612loxodonta_africanaENSLAFP0000002543573.972653.4247
ENSG00000181552homo_sapiensENSP0000031481077.55159.8639panthera_leoENSPLOP0000001111878.620760.6897
ENSG00000181552homo_sapiensENSP0000031481069.387853.7415ailuropoda_melanoleucaENSAMEP0000002096162.96348.7654
ENSG00000181552homo_sapiensENSP0000031481074.829955.102bos_indicus_hybridENSBIXP0000503788775.342555.4795
ENSG00000181552homo_sapiensENSP0000031481074.149755.102bos_indicus_hybridENSBIXP0000501603874.657555.4795
ENSG00000181552homo_sapiensENSP0000031481076.870855.7823oryctolagus_cuniculusENSOCUP0000002261473.376653.2468
ENSG00000181552homo_sapiensENSP0000031481077.55163.2653oryctolagus_cuniculusENSOCUP0000001817077.55163.2653
ENSG00000181552homo_sapiensENSP0000031481078.231359.1837equus_caballusENSECAP0000003566879.310360
ENSG00000181552homo_sapiensENSP0000031481070.06851.0204canis_lupus_familiarisENSCAFP0084503224971.034551.7241
ENSG00000181552homo_sapiensENSP0000031481077.55159.8639panthera_pardusENSPPRP0000002808678.620760.6897
ENSG00000181552homo_sapiensENSP0000031481078.911659.1837marmota_marmota_marmotaENSMMMP0000001692476.821257.6159
ENSG00000181552homo_sapiensENSP0000031481072.789155.102balaenoptera_musculusENSBMSP0001001216673.287755.4795
ENSG00000181552homo_sapiensENSP0000031481077.55159.8639felis_catusENSFCAP0000001277078.620760.6897
ENSG00000181552homo_sapiensENSP0000031481061.224540.8163monodelphis_domesticaENSMODP0000003435748.91332.6087
ENSG00000181552homo_sapiensENSP0000031481072.108852.381bison_bison_bisonENSBBBP0000000178368.831250
ENSG00000181552homo_sapiensENSP0000031481074.149755.102monodon_monocerosENSMMNP0001501330574.657555.4795
ENSG00000181552homo_sapiensENSP0000031481076.870855.102sus_scrofaENSSSCP0000002597077.397355.4795
ENSG00000181552homo_sapiensENSP0000031481071.428650.3401ovis_aries_rambouilletENSOARP0002001705658.659241.3408
ENSG00000181552homo_sapiensENSP0000031481075.510256.4626ovis_aries_rambouilletENSOARP0002001727276.027456.8493
ENSG00000181552homo_sapiensENSP0000031481068.027251.7007ochotona_princepsENSOPRP0000001195768.965552.4138
ENSG00000181552homo_sapiensENSP0000031481074.149755.7823delphinapterus_leucasENSDLEP0000000231162.285746.8571
ENSG00000181552homo_sapiensENSP0000031481073.469453.7415mus_caroliMGP_CAROLIEiJ_P003650372.483253.0201
ENSG00000181552homo_sapiensENSP0000031481074.829954.4218mus_musculusENSMUSP0000009821073.825553.6913
ENSG00000181552homo_sapiensENSP0000031481078.911658.5034dipodomys_ordiiENSDORP0000002313276.315856.5789
ENSG00000181552homo_sapiensENSP0000031481074.149755.7823mustela_putorius_furoENSMPUP0000001826575.172456.5517
ENSG00000181552homo_sapiensENSP0000031481077.55158.5034vicugna_pacosENSVPAP0000000685578.082258.9041
ENSG00000181552homo_sapiensENSP0000031481097.959296.5986chlorocebus_sabaeusENSCSAP0000001765297.959296.5986
ENSG00000181552homo_sapiensENSP0000031481077.55158.5034camelus_dromedariusENSCDRP0000500255878.082258.9041
ENSG00000181552homo_sapiensENSP0000031481076.870858.5034panthera_tigris_altaicaENSPTIP0000000158677.93159.3103
ENSG00000181552homo_sapiensENSP0000031481074.149755.7823rattus_norvegicusENSRNOP0000004073476.223857.3427
ENSG00000181552homo_sapiensENSP0000031481074.829956.4626rattus_norvegicusENSRNOP0000007557573.333355.3333
ENSG00000181552homo_sapiensENSP0000031481068.027242.1769peromyscus_maniculatus_bairdiiENSPEMP0000003309667.567641.8919
ENSG00000181552homo_sapiensENSP0000031481076.190553.0612peromyscus_maniculatus_bairdiiENSPEMP0000001463574.666752
ENSG00000181552homo_sapiensENSP0000031481074.829955.7823mus_spicilegusENSMSIP0000002311273.825555.0336
ENSG00000181552homo_sapiensENSP0000031481074.149757.8231cricetulus_griseus_chok1gshdENSCGRP0000101405872.666756.6667
ENSG00000181552homo_sapiensENSP0000031481073.469457.8231pteropus_vampyrusENSPVAP0000001279573.972658.2192
ENSG00000181552homo_sapiensENSP0000031481075.510257.8231myotis_lucifugusENSMLUP0000001289573.509956.2914
ENSG00000181552homo_sapiensENSP0000031481061.224540.1361vombatus_ursinusENSVURP0001002603161.643840.411
ENSG00000181552homo_sapiensENSP0000031481076.870860.5442rhinolophus_ferrumequinumENSRFEP0001002571677.397360.9589
ENSG00000181552homo_sapiensENSP0000031481073.469453.7415neovison_visonENSNVIP0000001700674.482854.4828
ENSG00000181552homo_sapiensENSP0000031481073.469454.4218neovison_visonENSNVIP0000001696574.482855.1724
ENSG00000181552homo_sapiensENSP0000031481069.387851.0204bos_taurusENSBTAP0000006818172.340453.1915
ENSG00000181552homo_sapiensENSP0000031481070.06851.0204canis_lupus_dingoENSCAFP0002001799363.580246.2963
ENSG00000181552homo_sapiensENSP0000031481079.591860.5442sciurus_vulgarisENSSVLP0000500205780.13760.9589
ENSG00000181552homo_sapiensENSP0000031481059.183740.8163phascolarctos_cinereusENSPCIP0000003916955.41438.2166
ENSG00000181552homo_sapiensENSP0000031481074.829955.7823cervus_hanglu_yarkandensisENSCHYP0000002138975.342556.1644
ENSG00000181552homo_sapiensENSP0000031481075.510257.1429catagonus_wagneriENSCWAP0000000842776.027457.5342
ENSG00000181552homo_sapiensENSP0000031481082.312969.3878otolemur_garnettiiENSOGAP0000000695382.312969.3878
ENSG00000181552homo_sapiensENSP0000031481076.190557.8231urocitellus_parryiiENSUPAP0001000228274.172256.2914
ENSG00000181552homo_sapiensENSP0000031481076.190557.1429moschus_moschiferusENSMMSP0000001116076.712357.5342
ENSG00000181552homo_sapiensENSP0000031481097.959296.5986rhinopithecus_roxellanaENSRROP0000002741897.959296.5986
ENSG00000181552homo_sapiensENSP0000031481073.469451.0204mus_pahariMGP_PahariEiJ_P008462372.483250.3356

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003674enables molecular_function1NDHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005576located_in extracellular region1IEAHomo_sapiens(9606)Component

Expression