Functions and Diseases

RBP Type Canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000181481 Gene ID 84282 Accession 21158
Symbol RNF135 Alias L13;MMFD;REUL;Riplet Full Name ring finger protein 135
Status Confidence Length 28928 bases Strand Plus strand
Position 17 : 30970984 - 30999911 RNA binding domain SPRY
Summary The protein encoded by this gene contains a RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions. This gene is located in a chromosomal region known to be frequently deleted in patients with neurofibromatosis. Alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000328340 SPRY PF00622 3.6e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RNF135-204 ENST00000443677 1261 162aa ENSP00000411965
RNF135-201 ENST00000324689 1905 210aa ENSP00000323693
RNF135-202 ENST00000328381 2054 432aa ENSP00000328340
RNF135-205 ENST00000535306 2098 286aa ENSP00000440470
RNF135-206 ENST00000580444 475 158aa ENSP00000464549
RNF135-203 ENST00000434242 257 86aa ENSP00000467799

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
94007Paliperidone Palmitate4E-627846195
94008Schizophrenia4E-627846195

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000209involved_in protein polyubiquitination1IDAHomo_sapiens(9606)Process
GO:0004842enables ubiquitin-protein transferase activity3EXP,IBA,IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005737is_active_in cytoplasm2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0010494located_in cytoplasmic stress granule1IDAHomo_sapiens(9606)Component
GO:0010994involved_in free ubiquitin chain polymerization1IDAHomo_sapiens(9606)Process
GO:0016567involved_in protein ubiquitination1IDAHomo_sapiens(9606)Process
GO:0032728involved_in positive regulation of interferon-beta production1IMPHomo_sapiens(9606)Process
GO:0039529involved_in RIG-I signaling pathway2IDA,IMPHomo_sapiens(9606)Process
GO:0039552enables RIG-I binding1IPIHomo_sapiens(9606)Function
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0043021enables ribonucleoprotein complex binding3IBA,IDA,IPIHomo_sapiens(9606)Function
GO:0045087involved_in innate immune response1TASHomo_sapiens(9606)Process
GO:0045088involved_in regulation of innate immune response2IBA,IMPHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0051260involved_in protein homooligomerization1IDAHomo_sapiens(9606)Process
GO:0061630enables ubiquitin protein ligase activity1IDAHomo_sapiens(9606)Function
GO:0070534involved_in protein K63-linked ubiquitination1IDAHomo_sapiens(9606)Process
GO:0140374involved_in antiviral innate immune response1IMPHomo_sapiens(9606)Process
GO:1990904part_of ribonucleoprotein complex1IDAHomo_sapiens(9606)Component

Expression