RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000181481 Gene ID
84282
Accession
21158
Symbol
RNF135
Alias
L13;MMFD;REUL;Riplet
Full Name
ring finger protein 135
Status
Confidence
Length
28928 bases
Strand
Plus strand
Position
17 : 30970984 - 30999911
RNA binding domain
SPRY
Summary
The protein encoded by this gene contains a RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions. This gene is located in a chromosomal region known to be frequently deleted in patients with neurofibromatosis. Alternatively spliced transcript variants encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000328340
SPRY
PF00622
3.6e-09
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
RNF135-204
ENST00000443677
1261
162aa
ENSP00000411965
RNF135-201
ENST00000324689
1905
210aa
ENSP00000323693
RNF135-202
ENST00000328381
2054
432aa
ENSP00000328340
RNF135-205
ENST00000535306
2098
286aa
ENSP00000440470
RNF135-206
ENST00000580444
475
158aa
ENSP00000464549
RNF135-203
ENST00000434242
257
86aa
ENSP00000467799
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
94007 Paliperidone Palmitate 4E-6 27846195 94008 Schizophrenia 4E-6 27846195
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000209 involved_in protein polyubiquitination 1 IDA Homo_sapiens(9606) Process GO:0004842 enables ubiquitin-protein transferase activity 3 EXP,IBA,IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005737 is_active_in cytoplasm 2 IBA,IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0010494 located_in cytoplasmic stress granule 1 IDA Homo_sapiens(9606) Component GO:0010994 involved_in free ubiquitin chain polymerization 1 IDA Homo_sapiens(9606) Process GO:0016567 involved_in protein ubiquitination 1 IDA Homo_sapiens(9606) Process GO:0032728 involved_in positive regulation of interferon-beta production 1 IMP Homo_sapiens(9606) Process GO:0039529 involved_in RIG-I signaling pathway 2 IDA,IMP Homo_sapiens(9606) Process GO:0039552 enables RIG-I binding 1 IPI Homo_sapiens(9606) Function GO:0042802 enables identical protein binding 1 IPI Homo_sapiens(9606) Function GO:0043021 enables ribonucleoprotein complex binding 3 IBA,IDA,IPI Homo_sapiens(9606) Function GO:0045087 involved_in innate immune response 1 TAS Homo_sapiens(9606) Process GO:0045088 involved_in regulation of innate immune response 2 IBA,IMP Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function GO:0051260 involved_in protein homooligomerization 1 IDA Homo_sapiens(9606) Process GO:0061630 enables ubiquitin protein ligase activity 1 IDA Homo_sapiens(9606) Function GO:0070534 involved_in protein K63-linked ubiquitination 1 IDA Homo_sapiens(9606) Process GO:0140374 involved_in antiviral innate immune response 1 IMP Homo_sapiens(9606) Process GO:1990904 part_of ribonucleoprotein complex 1 IDA Homo_sapiens(9606) Component
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