Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000179046 Gene ID 205860 Accession 26378
Symbol TRIML2 Alias SPRYD6 Full Name tripartite motif family like 2
Status Confidence Length 18332 bases Strand Minus strand
Position 4 : 188091272 - 188109603 RNA binding domain SPRY
Summary This gene encodes a member of the tri-partite motif (TRIM) family of proteins. This protein may be regulated by the tumor suppressor p53 and may regulate p53 through the enhancement of p53 SUMOylation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000317498 SPRY PF00622 7.6e-12 1
ENSP00000422581 SPRY PF00622 7.9e-12 1
ENSP00000507413 SPRY PF00622 7.9e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TRIML2-207 ENST00000512729 1639 437aa ENSP00000422581
TRIML2-201 ENST00000326754 1305 422aa ENSP00000317498
TRIML2-205 ENST00000503475 1006 118aa ENSP00000421575
TRIML2-204 ENST00000503141 1242 118aa ENSP00000426074
TRIML2-206 ENST00000511771 1252 No protein -
TRIML2-203 ENST00000502707 541 No protein -
TRIML2-202 ENST00000394461 536 No protein -
TRIML2-208 ENST00000682553 1998 437aa ENSP00000507413

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
919893-hydroxy-1-methylpropylmercapturic acid1E-626053186
91990Smoking1E-626053186

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0008270enables zinc ion binding1IEAHomo_sapiens(9606)Function
GO:0010468involved_in regulation of gene expression1IBAHomo_sapiens(9606)Process
GO:0016567involved_in protein ubiquitination2IBA,IEAHomo_sapiens(9606)Process
GO:0032526involved_in response to retinoic acid1IEAHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0045087involved_in innate immune response1IBAHomo_sapiens(9606)Process
GO:0061630enables ubiquitin protein ligase activity1IBAHomo_sapiens(9606)Function

Expression