Functions and Diseases

RBP Type Canonical_RBPs
Diseases Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000169567 Gene ID 3094 Accession 4912
Symbol HINT1 Alias HINT;NMAN;PKCI-1;PRKCNH1 Full Name histidine triad nucleotide binding protein 1
Status Confidence Length 9967 bases Strand Minus strand
Position 5 : 131155383 - 131165349 RNA binding domain DcpS_C
Summary This gene encodes a protein that hydrolyzes purine nucleotide phosphoramidates substrates, including AMP-morpholidate, AMP-N-alanine methyl ester, AMP-alpha-acetyl lysine methyl ester, and AMP-NH2. The encoded protein interacts with these substrates via a histidine triad motif. This gene is considered a tumor suppressor gene. In addition, mutations in this gene can cause autosomal recessive neuromyotonia and axonal neuropathy. There are several related pseudogenes on chromosome 7. Several transcript variants have been observed. [provided by RefSeq, Dec 2015]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000304229 DcpS_C PF11969 3.2e-20 1
ENSP00000502350 DcpS_C PF11969 3.2e-11 1
ENSP00000424974 DcpS_C PF11969 3.6e-11 1
ENSP00000427008 DcpS_C PF11969 5.6e-11 1
ENSP00000427499 DcpS_C PF11969 5.6e-11 1
ENSP00000502370 DcpS_C PF11969 5.6e-11 1
ENSP00000426860 DcpS_C PF11969 6.1e-11 1
ENSP00000430909 DcpS_C PF11969 8.7e-11 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
HINT1-211 ENST00000675100 598 109aa ENSP00000502350
HINT1-213 ENST00000675372 3080 65aa ENSP00000502792
HINT1-201 ENST00000304043 852 126aa ENSP00000304229
HINT1-212 ENST00000675135 902 No protein -
HINT1-207 ENST00000511475 1032 103aa ENSP00000427008
HINT1-206 ENST00000508495 825 78aa ENSP00000424974
HINT1-215 ENST00000676117 988 No protein -
HINT1-205 ENST00000508488 1070 103aa ENSP00000427499
HINT1-210 ENST00000520028 1038 91aa ENSP00000430909
HINT1-209 ENST00000513345 1064 65aa ENSP00000421608
HINT1-214 ENST00000675491 3527 103aa ENSP00000502370
HINT1-204 ENST00000506908 3628 78aa ENSP00000426860
HINT1-208 ENST00000513012 3504 65aa ENSP00000422444
HINT1-203 ENST00000506207 479 No protein -
HINT1-202 ENST00000504202 619 65aa ENSP00000425260

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000118part_of histone deacetylase complex1IDAHomo_sapiens(9606)Component
GO:0000166enables nucleotide binding1IEAHomo_sapiens(9606)Function
GO:0005080enables protein kinase C binding1TASHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus2IBA,IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1IDAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0005856located_in cytoskeleton1TASHomo_sapiens(9606)Component
GO:0005886located_in plasma membrane1IDAHomo_sapiens(9606)Component
GO:0006355involved_in regulation of DNA-templated transcription1IMPHomo_sapiens(9606)Process
GO:0007165involved_in signal transduction1TASHomo_sapiens(9606)Process
GO:0009154involved_in purine ribonucleotide catabolic process2IBA,IDAHomo_sapiens(9606)Process
GO:0016787enables hydrolase activity2IBA,IDAHomo_sapiens(9606)Function
GO:0016926involved_in protein desumoylation1IMPHomo_sapiens(9606)Process
GO:0016929enables deSUMOylase activity1IMPHomo_sapiens(9606)Function
GO:0043530enables adenosine 5-monophosphoramidase activity2IDA,IMPHomo_sapiens(9606)Function
GO:0050850involved_in positive regulation of calcium-mediated signaling1IEAHomo_sapiens(9606)Process
GO:0070062located_in extracellular exosome1HDAHomo_sapiens(9606)Component
GO:0072332involved_in intrinsic apoptotic signaling pathway by p53 class mediator1IMPHomo_sapiens(9606)Process

Expression