RBP Type |
Canonical_RBPs |
Diseases |
N.A. |
Drug |
N.A. |
Main interacting RNAs |
N.A. |
Moonlighting functions |
E3 ligase |
Localizations |
N.A. |
BulkPerturb-seq
|
|
Ensembl ID | ENSG00000168930 | Gene ID |
57093 |
Accession |
13431 |
Symbol |
TRIM49 |
Alias |
|
Full Name |
|
Status |
Confidence |
Length |
10921 bases |
Strand |
Minus strand |
Position |
11 : 89797655 - 89808575 |
RNA binding domain |
SPRY |
Summary |
|
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSP00000431618 |
SPRY |
PF00622 |
8.4e-07 |
1 |
ENSP00000327604 |
SPRY |
PF00622 |
1.3e-06 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
TRIM49-201 |
ENST00000329758 |
2163 |
452aa |
ENSP00000327604 |
TRIM49-202 |
ENST00000532501 |
1437 |
375aa |
ENSP00000431618 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
69769 | Trans Fatty Acids | 3E-6 | 25646338 |
77927 | Trans Fatty Acids | 3E-6 | 25646338 |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
GO:0005515 | enables protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0005737 | is_active_in cytoplasm | 1 | IBA | Homo_sapiens(9606) | Component |
GO:0008270 | enables zinc ion binding | 1 | IEA | Homo_sapiens(9606) | Function |
GO:0010468 | involved_in regulation of gene expression | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0016567 | involved_in protein ubiquitination | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0019901 | enables protein kinase binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0045087 | involved_in innate immune response | 1 | IBA | Homo_sapiens(9606) | Process |
GO:0061630 | enables ubiquitin protein ligase activity | 1 | IBA | Homo_sapiens(9606) | Function |