RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
snRNA
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000168566 Gene ID
154007
Accession
21368
Symbol
SNRNP48
Alias
C6orf151;dJ512B11.2;dJ336K20B.1
Full Name
small nuclear ribonucleoprotein U11/U12 subunit 48
Status
Confidence
Length
21770 bases
Strand
Plus strand
Position
6 : 7590198 - 7611967
RNA binding domain
zf-U11-48K
Summary
Predicted to enable metal ion binding activity. Predicted to be involved in RNA splicing. Located in cytosol and nucleoplasm. Part of U12-type spliceosomal complex. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000489245
zf-U11-48K
PF05253
1.2e-09
1
ENSP00000339834
zf-U11-48K
PF05253
3.5e-09
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
34850409
A dual role of human tRNA methyltransferase hTrmt13 in regulating translation and transcription.
Hao Li
2022-03-15
The EMBO journal
Name
Transcript ID
bp
Protein
Translation ID
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005654 is_active_in nucleoplasm 3 IBA,IDA,TAS Homo_sapiens(9606) Component GO:0005689 part_of U12-type spliceosomal complex 2 IBA,IDA Homo_sapiens(9606) Component GO:0005829 is_active_in cytosol 2 IBA,IDA Homo_sapiens(9606) Component GO:0006397 involved_in mRNA processing 1 IEA Homo_sapiens(9606) Process GO:0008380 involved_in RNA splicing 1 IC Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function
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