RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Stress granucle
BulkPerturb-seq
Ensembl ID ENSG00000168014 Gene ID
26005
Accession
24564
Symbol
C2CD3
Alias
OFD14
Full Name
C2 domain containing 3 centriole elongation regulator
Status
Confidence
Length
158493 bases
Strand
Minus strand
Position
11 : 74012718 - 74171210
RNA binding domain
N.A.
Summary
This gene encodes a protein that functions as a regulator of centriole elongation. Studies of the orthologous mouse protein show that it promotes centriolar distal appendage assembly and is also required for the recruitment of other ciliogenic proteins, including intraflagellar transport proteins. Mutations in this gene cause orofaciodigital syndrome XIV (OFD14), a ciliopathy resulting in malformations of the oral cavity, face and digits. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Nov 2014]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
C2CD3-207
ENST00000442398
7683
1921aa
ENSP00000404577
C2CD3-223
ENST00000680231
6977
2308aa
ENSP00000505413
C2CD3-202
ENST00000334126
7939
2353aa
ENSP00000334379
C2CD3-236
ENST00000681609
7777
427aa
ENSP00000505133
C2CD3-232
ENST00000681291
7767
129aa
ENSP00000505182
C2CD3-228
ENST00000680839
7289
129aa
ENSP00000506002
C2CD3-239
ENST00000681924
7808
1314aa
ENSP00000505101
C2CD3-226
ENST00000680665
7977
1662aa
ENSP00000505527
C2CD3-211
ENST00000538625
3128
No protein
-
C2CD3-237
ENST00000681811
7614
1537aa
ENSP00000506315
C2CD3-235
ENST00000681385
7361
129aa
ENSP00000505069
C2CD3-230
ENST00000681143
7297
2218aa
ENSP00000505970
C2CD3-219
ENST00000679415
7670
129aa
ENSP00000505672
C2CD3-220
ENST00000679906
7598
2301aa
ENSP00000505021
C2CD3-238
ENST00000681829
7206
2343aa
ENSP00000505375
C2CD3-215
ENST00000542452
1031
No protein
-
C2CD3-233
ENST00000681310
5983
1938aa
ENSP00000506236
C2CD3-201
ENST00000313663
6283
1963aa
ENSP00000323339
C2CD3-204
ENST00000414160
6007
1968aa
ENSP00000388750
C2CD3-210
ENST00000538361
6163
1937aa
ENSP00000441742
C2CD3-231
ENST00000681233
8065
No protein
-
C2CD3-221
ENST00000679940
2074
No protein
-
C2CD3-216
ENST00000542484
1091
No protein
-
C2CD3-213
ENST00000540057
556
No protein
-
C2CD3-224
ENST00000680306
3189
No protein
-
C2CD3-209
ENST00000537285
871
No protein
-
C2CD3-229
ENST00000681000
2966
No protein
-
C2CD3-203
ENST00000366334
727
No protein
-
C2CD3-205
ENST00000415191
2587
No protein
-
C2CD3-227
ENST00000680718
3216
506aa
ENSP00000505340
C2CD3-212
ENST00000539061
2640
417aa
ENSP00000445933
C2CD3-206
ENST00000436679
1134
No protein
-
C2CD3-225
ENST00000680645
2401
406aa
ENSP00000506347
C2CD3-222
ENST00000680173
2535
No protein
-
C2CD3-234
ENST00000681345
767
143aa
ENSP00000504924
C2CD3-214
ENST00000541922
936
No protein
-
C2CD3-208
ENST00000535954
574
159aa
ENSP00000439343
C2CD3-218
ENST00000544293
731
No protein
-
C2CD3-217
ENST00000542930
524
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
11180 Hip 2.24926776039999E-7 17903296
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0001701 involved_in in utero embryonic development 1 IEA Homo_sapiens(9606) Process GO:0001947 involved_in heart looping 1 IEA Homo_sapiens(9606) Process GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005813 located_in centrosome 1 IDA Homo_sapiens(9606) Component GO:0005814 is_active_in centriole 2 IBA,IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0007420 involved_in brain development 1 IEA Homo_sapiens(9606) Process GO:0008589 involved_in regulation of smoothened signaling pathway 1 IEA Homo_sapiens(9606) Process GO:0016485 involved_in protein processing 1 IEA Homo_sapiens(9606) Process GO:0021915 involved_in neural tube development 1 IEA Homo_sapiens(9606) Process GO:0021997 involved_in neural plate axis specification 1 IEA Homo_sapiens(9606) Process GO:0030162 involved_in regulation of proteolysis 1 IEA Homo_sapiens(9606) Process GO:0034451 is_active_in centriolar satellite 2 IBA,IDA Homo_sapiens(9606) Component GO:0036064 located_in ciliary basal body 1 IEA Homo_sapiens(9606) Component GO:0042733 involved_in embryonic digit morphogenesis 1 IEA Homo_sapiens(9606) Process GO:0060271 involved_in cilium assembly 1 IBA Homo_sapiens(9606) Process GO:0061511 involved_in centriole elongation 2 IBA,IDA Homo_sapiens(9606) Process GO:0071539 involved_in protein localization to centrosome 1 IDA Homo_sapiens(9606) Process GO:1905515 involved_in non-motile cilium assembly 1 IMP Homo_sapiens(9606) Process
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.