Welcome to
RBP World!
Functions and Diseases
RBP Type | Canonical_RBPs |
Diseases | N.A. |
Drug | N.A. |
Main interacting RNAs | mRNA |
Moonlighting functions | N.A. |
Localizations | Stress granucle |
BulkPerturb-seq | N.A. |
Description
Ensembl ID | ENSG00000166173 | Gene ID | 55323 | Accession | 24012 |
Symbol | LARP6 | Alias | ACHN | Full Name | La ribonucleoprotein 6, translational regulator |
Status | Confidence | Length | 25028 bases | Strand | Minus strand |
Position | 15 : 70829130 - 70854157 | RNA binding domain | SUZ-C , La | ||
Summary | Enables RNA binding activity and myosin binding activity. Involved in positive regulation of collagen biosynthetic process; positive regulation of mRNA binding activity; and positive regulation of translation. Located in nucleus. Part of polysome. [provided by Alliance of Genome Resources, Apr 2022] |
RNA binding proteomes (RBPomes)
Pubmed ID | Full Name | Cell | Author | Time | Doi |
---|
Literatures on RNA binding capacity
Pubmed ID | Title | Author | Time | Journal |
---|---|---|---|---|
19917293 | Binding of LARP6 to the conserved 5' stem-loop regulates translation of mRNAs encoding type I collagen. | Le Cai | 2010-01-15 | Journal of molecular biology |
27011170 | LARP6 Meets Collagen mRNA: Specific Regulation of Type I Collagen Expression. | Yujie Zhang | 2016-03-22 | International journal of molecular sciences |
28112218 | mTORC1 phosphorylates LARP6 to stimulate type I collagen expression. | Yujie Zhang | 2017-01-23 | Scientific reports |
24833510 | Screening for antifibrotic compounds using high throughput system based on fluorescence polarization. | Branko Stefanovic | 2014-04-10 | Biology |
26932461 | Akt mediated phosphorylation of LARP6; critical step in biosynthesis of type I collagen. | Yujie Zhang | 2016-03-02 | Scientific reports |
25271881 | Role of LARP6 and nonmuscle myosin in partitioning of collagen mRNAs to the ER membrane. | Hao Wang | 2014-01-01 | PloS one |
25692237 | Characterization of binding of LARP6 to the 5' stem-loop of collagen mRNAs: implications for synthesis of type I collagen. | Lela Stefanovic | 2014-01-01 | RNA biology |
20603131 | Nonmuscle myosin-dependent synthesis of type I collagen. | Le Cai | 2010-08-27 | Journal of molecular biology |
34278289 | Imaging of type I procollagen biosynthesis in cells reveals biogenesis in highly organized bodies; Collagenosomes. | Branko Stefanovic | 2021-12-01 | Matrix biology plus |
35721328 | Inhibitory Effect of Mitoxantrone on Collagen Synthesis in Dermal Fibroblasts. | Kyung-Il Kim | 2022-06-01 | Annals of dermatology |
33930553 | Systemic sclerosis biomarkers detection in the secretome of TGFβ1-activated primary human lung fibroblasts. | T Ryan Kendall | 2021-06-30 | Journal of proteomics |
35198898 | RNA localization in confined cells depends on cellular mechanical activity and contributes to confined migration. | A Rebecca Moriarty | 2022-02-18 | iScience |
36018788 | PRIESSTESS: interpretable, high-performing models of the sequence and structure preferences of RNA-binding proteins. | U Kaitlin Laverty | 2022-10-28 | Nucleic acids research |
36691044 | LARP6 suppresses colorectal cancer progression through ZNF267/SGMS2-mediated imbalance of sphingomyelin synthesis. | Xiaoli Long | 2023-01-24 | Journal of experimental & clinical cancer research : CR |
23887937 | Conservation of RNA chaperone activity of the human La-related proteins 4, 6 and 7. | H Rawaa Hussain | 2013-10-01 | Nucleic acids research |
35176288 | LARP6 Regulates Keloid Fibroblast Proliferation, Invasion, and Ability to Synthesize Collagen. | Lingxi Chen | 2022-09-01 | The Journal of investigative dermatology |
25488812 | Synergic interplay of the La motif, RRM1 and the interdomain linker of LARP6 in the recognition of collagen mRNA expands the RNA binding repertoire of the La module. | Luigi Martino | 2015-01-01 | Nucleic acids research |
25735911 | Diversity and selectivity in mRNA translation on the endoplasmic reticulum. | W David Reid | 2015-04-01 | Nature reviews. Molecular cell biology |
25896032 | (1)H, (15)N and (13)C chemical shift assignments of the La motif and RRM1 from human LARP6. | Luigi Martino | 2015-10-01 | Biomolecular NMR assignments |
25753663 | Structural insight into the mechanism of stabilization of the 7SK small nuclear RNA by LARP7. | Emiko Uchikawa | 2015-03-31 | Nucleic acids research |
26501340 | The La-Related Proteins, a Family with Connections to Cancer. | Chara Stavraka | 2015-10-16 | Biomolecules |
28782243 | The La and related RNA-binding proteins (LARPs): structures, functions, and evolving perspectives. | J Richard Maraia | 2017-11-01 | Wiley interdisciplinary reviews. RNA |
33171110 | Subcellular mRNA Localization Regulates Ribosome Biogenesis in Migrating Cells. | Maria Dermit | 2020-11-09 | Developmental cell |
23148093 | The association of a La module with the PABP-interacting motif PAM2 is a recurrent evolutionary process that led to the neofunctionalization of La-related proteins. | Rémy Merret | 2013-01-01 | RNA (New York, N.Y.) |
34896113 | Characterization of Sequence-Specific Binding of LARP6 to the 5' Stem-Loop of Type I Collagen mRNAs and Implications for Rational Design of Antifibrotic Drugs. | Lela Stefanovic | 2022-01-30 | Journal of molecular biology |
Transcripts
Name | Transcript ID | bp | Protein | Translation ID |
---|---|---|---|---|
LARP6-201 | ENST00000299213 | 4467 | 491aa | ENSP00000299213 |
LARP6-204 | ENST00000559316 | 558 | 31aa | ENSP00000467334 |
LARP6-205 | ENST00000560052 | 473 | No protein | - |
LARP6-202 | ENST00000344870 | 527 | 93aa | ENSP00000343869 |
LARP6-203 | ENST00000559140 | 964 | 78aa | ENSP00000453551 |
Phenotypes
ensgID | Trait | pValue | Pubmed ID |
---|
GWAS
ensgID | SNP | Chromosome | Position | Trait | PubmedID | Or or BEAT | EFO ID |
---|
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSG00000166173 | homo_sapiens | ENSP00000428589 | 13.5949 | 7.20803 | homo_sapiens | ENSP00000299213 | 30.3462 | 16.0896 |
ENSG00000166173 | homo_sapiens | ENSP00000260956 | 32.8431 | 15.4412 | homo_sapiens | ENSP00000299213 | 27.2912 | 12.831 |
ENSG00000166173 | homo_sapiens | ENSP00000326128 | 18.4282 | 10.8401 | homo_sapiens | ENSP00000299213 | 27.6986 | 16.2933 |
ENSG00000166173 | homo_sapiens | ENSP00000344950 | 27.8351 | 15.1203 | homo_sapiens | ENSP00000299213 | 32.9939 | 17.9226 |
ENSG00000166173 | homo_sapiens | ENSP00000321997 | 14.8797 | 7.87746 | homo_sapiens | ENSP00000299213 | 27.6986 | 14.664 |
ENSG00000166173 | homo_sapiens | ENSP00000381490 | 18.5083 | 10.221 | homo_sapiens | ENSP00000299213 | 27.2912 | 15.0713 |
Orthologs
Ensembl ID | Source | Target | ||||||
---|---|---|---|---|---|---|---|---|
Species | Protein ID | Perc_pos | Perc_id | Species | Protein ID | Perc_pos | Perc_id | |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.389 | 99.1853 | nomascus_leucogenys | ENSNLEP00000016592 | 99.5918 | 99.3878 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 86.3544 | 86.3544 | pan_paniscus | ENSPPAP00000016245 | 100 | 100 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.7963 | 99.5927 | pongo_abelii | ENSPPYP00000007487 | 99.7963 | 99.5927 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 100 | 100 | pan_troglodytes | ENSPTRP00000012370 | 100 | 100 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 86.3544 | 86.3544 | gorilla_gorilla | ENSGGOP00000019931 | 100 | 100 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 55.8045 | 45.2138 | ornithorhynchus_anatinus | ENSOANP00000039342 | 53.1008 | 43.0233 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 81.8737 | 74.1344 | sarcophilus_harrisii | ENSSHAP00000021845 | 78.6693 | 71.2329 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 72.5051 | 65.7841 | notamacropus_eugenii | ENSMEUP00000002071 | 72.211 | 65.5172 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 93.4827 | 90.6314 | choloepus_hoffmanni | ENSCHOP00000002937 | 96.2264 | 93.2914 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 93.0754 | dasypus_novemcinctus | ENSDNOP00000024192 | 95.7143 | 93.2653 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 73.7271 | 69.6538 | echinops_telfairi | ENSETEP00000016570 | 73.8775 | 69.7959 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 98.778 | 98.5743 | callithrix_jacchus | ENSCJAP00000055171 | 98.778 | 98.5743 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.5927 | 99.1853 | cercocebus_atys | ENSCATP00000039654 | 99.5927 | 99.1853 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 93.89 | 92.2607 | macaca_fascicularis | ENSMFAP00000021146 | 69.5324 | 68.3258 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.5927 | 99.389 | macaca_mulatta | ENSMMUP00000005909 | 99.5927 | 99.389 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.5927 | 99.389 | macaca_nemestrina | ENSMNEP00000045680 | 99.5927 | 99.389 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.5927 | 99.389 | papio_anubis | ENSPANP00000014214 | 99.5927 | 99.389 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 85.947 | 85.947 | mandrillus_leucophaeus | ENSMLEP00000028736 | 99.5283 | 99.5283 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 85.1324 | 82.8921 | vulpes_vulpes | ENSVVUP00000020687 | 93.0958 | 90.6459 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 91.0387 | mus_spretus | MGP_SPRETEiJ_P0091815 | 95.3252 | 90.8537 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 83.5031 | 80.2444 | equus_asinus | ENSEASP00005007506 | 82.9959 | 79.7571 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 92.668 | capra_hircus | ENSCHIP00000011660 | 95.3252 | 92.4797 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 86.9654 | 84.7251 | loxodonta_africana | ENSLAFP00000013721 | 95.5257 | 93.0649 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 92.057 | panthera_leo | ENSPLOP00000005882 | 95.1219 | 91.8699 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 85.1324 | 83.2994 | ailuropoda_melanoleuca | ENSAMEP00000009354 | 88.5593 | 86.6525 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.723 | 92.8717 | bos_indicus_hybrid | ENSBIXP00005046055 | 95.5285 | 92.6829 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 82.6884 | 75.1527 | oryctolagus_cuniculus | ENSOCUP00000023224 | 73.5507 | 66.8478 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.334 | 94.501 | equus_caballus | ENSECAP00000026137 | 88.2463 | 86.5672 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.9083 | 92.668 | canis_lupus_familiaris | ENSCAFP00845031064 | 95.2965 | 93.047 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 92.4644 | panthera_pardus | ENSPPRP00000020123 | 95.3252 | 92.2764 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 88.1874 | 85.7434 | marmota_marmota_marmota | ENSMMMP00000005617 | 92.3241 | 89.7655 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.1303 | 93.279 | balaenoptera_musculus | ENSBMSP00010002125 | 95.7404 | 92.9006 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.7047 | 90.224 | cavia_porcellus | ENSCPOP00000018303 | 94.5122 | 90.0406 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.9267 | 93.0754 | felis_catus | ENSFCAP00000001265 | 95.7317 | 92.8862 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 87.5764 | 82.6884 | ursus_americanus | ENSUAMP00000012977 | 86.6936 | 81.8548 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 83.2994 | 74.3381 | monodelphis_domestica | ENSMODP00000051732 | 79.572 | 71.0117 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 60.2851 | 58.0448 | bison_bison_bison | ENSBBBP00000000448 | 96.1039 | 92.5325 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.5377 | 93.6864 | monodon_monoceros | ENSMMNP00015012406 | 96.146 | 93.3063 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.1303 | 93.6864 | sus_scrofa | ENSSSCP00000005349 | 95.935 | 93.4959 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.9083 | 92.2607 | microcebus_murinus | ENSMICP00000010224 | 95.102 | 92.449 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 92.057 | 87.169 | octodon_degus | ENSODEP00000021696 | 92.4335 | 87.5256 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 93.6864 | 89.8167 | jaculus_jaculus | ENSJJAP00000006308 | 94.6502 | 90.7407 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 92.4644 | ovis_aries_rambouillet | ENSOARP00020022240 | 95.3252 | 92.2764 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 62.7291 | 57.8411 | ochotona_princeps | ENSOPRP00000004464 | 89.2754 | 82.3188 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 64.1548 | 59.6741 | ochotona_princeps | ENSOPRP00000009868 | 90.5172 | 84.1954 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.5377 | 93.6864 | delphinapterus_leucas | ENSDLEP00000001885 | 96.146 | 93.3063 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.723 | 92.2607 | physeter_catodon | ENSPCTP00005013058 | 95.3347 | 91.8864 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 91.0387 | mus_caroli | MGP_CAROLIEiJ_P0088198 | 95.5193 | 91.0387 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 91.2424 | mus_musculus | ENSMUSP00000040309 | 95.3252 | 91.0569 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 87.9837 | 81.2627 | dipodomys_ordii | ENSDORP00000027236 | 88.7064 | 81.9302 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 82.6884 | 81.0591 | mustela_putorius_furo | ENSMPUP00000016978 | 94.8598 | 92.9907 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.1853 | 98.778 | aotus_nancymaae | ENSANAP00000013873 | 99.1853 | 98.778 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 85.5397 | 85.1324 | saimiri_boliviensis_boliviensis | ENSSBOP00000014889 | 99.0566 | 98.5849 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 99.5927 | 99.389 | chlorocebus_sabaeus | ENSCSAP00000009831 | 99.5927 | 99.389 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 82.8921 | 79.6334 | tupaia_belangeri | ENSTBEP00000013075 | 95.9906 | 92.217 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 90.6314 | mesocricetus_auratus | ENSMAUP00000020461 | 95.3252 | 90.4472 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.5377 | 93.6864 | phocoena_sinus | ENSPSNP00000000879 | 96.146 | 93.3063 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 81.6701 | 76.9857 | camelus_dromedarius | ENSCDRP00005019589 | 87.1739 | 82.1739 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 83.5031 | 81.2627 | carlito_syrichta | ENSTSYP00000027569 | 83.6735 | 81.4286 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 83.0957 | 80.8554 | panthera_tigris_altaica | ENSPTIP00000016594 | 82.9268 | 80.6911 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.7047 | 89.8167 | rattus_norvegicus | ENSRNOP00000017147 | 94.5122 | 89.6341 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 90.224 | microtus_ochrogaster | ENSMOCP00000010273 | 95.1219 | 90.0406 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.9083 | 91.0387 | peromyscus_maniculatus_bairdii | ENSPEMP00000012619 | 94.7154 | 90.8537 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 60.2851 | 57.8411 | bos_mutus | ENSBMUP00000010271 | 96.1039 | 92.2078 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.723 | 91.2424 | mus_spicilegus | ENSMSIP00000000096 | 95.5285 | 91.0569 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.5193 | 91.0387 | cricetulus_griseus_chok1gshd | ENSCGRP00001027475 | 95.3252 | 90.8537 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 93.6864 | pteropus_vampyrus | ENSPVAP00000005314 | 95.1219 | 93.4959 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.9267 | 94.2974 | myotis_lucifugus | ENSMLUP00000009392 | 95.7317 | 94.1057 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 82.6884 | 74.3381 | vombatus_ursinus | ENSVURP00010024157 | 82.0202 | 73.7374 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.723 | 93.279 | rhinolophus_ferrumequinum | ENSRFEP00010014157 | 95.5285 | 93.0894 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 81.6701 | 79.8371 | neovison_vison | ENSNVIP00000002994 | 81.5041 | 79.6748 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.723 | 92.8717 | bos_taurus | ENSBTAP00000063042 | 95.5285 | 92.6829 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.9267 | 92.4644 | heterocephalus_glaber_female | ENSHGLP00000031049 | 95.1515 | 91.7172 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.9083 | 94.2974 | rhinopithecus_bieti | ENSRBIP00000017767 | 95.102 | 94.4898 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 94.9083 | 92.668 | canis_lupus_dingo | ENSCAFP00020009008 | 95.2965 | 93.047 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.945 | 94.7047 | sciurus_vulgaris | ENSSVLP00005012386 | 96.748 | 94.5122 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 83.5031 | 75.5601 | phascolarctos_cinereus | ENSPCIP00000027788 | 79.6116 | 72.0388 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 61.9145 | 59.0631 | procavia_capensis | ENSPCAP00000013261 | 72.0379 | 68.7204 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 89.8167 | nannospalax_galili | ENSNGAP00000012351 | 95.1219 | 89.6341 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 89.8167 | 86.558 | bos_grunniens | ENSBGRP00000026182 | 95.4545 | 91.9913 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 92.668 | chinchilla_lanigera | ENSCLAP00000011443 | 94.929 | 92.2921 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 92.4644 | cervus_hanglu_yarkandensis | ENSCHYP00000032259 | 95.1219 | 92.2764 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.7413 | 94.501 | catagonus_wagneri | ENSCWAP00000011884 | 96.5447 | 94.3089 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 91.2424 | 89.613 | ictidomys_tridecemlineatus | ENSSTOP00000019162 | 97.18 | 95.4447 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.112 | 92.668 | otolemur_garnettii | ENSOGAP00000000468 | 95.3061 | 92.8571 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 98.9817 | 98.167 | cebus_imitator | ENSCCAP00000036828 | 98.9817 | 98.167 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 96.1303 | 93.89 | urocitellus_parryii | ENSUPAP00010004000 | 96.3265 | 94.0816 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.9267 | 93.279 | moschus_moschiferus | ENSMMSP00000005264 | 95.7317 | 93.0894 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 98.9817 | 98.3707 | rhinopithecus_roxellana | ENSRROP00000039531 | 66.4843 | 66.0739 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.3157 | 90.4277 | mus_pahari | MGP_PahariEiJ_P0023845 | 95.1219 | 90.2439 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 95.112 | 92.668 | propithecus_coquereli | ENSPCOP00000021779 | 94.9187 | 92.4797 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 22.6069 | 10.998 | caenorhabditis_elegans | R144.7b.1 | 9.65217 | 4.69565 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 20.3666 | 13.6456 | caenorhabditis_elegans | T12F5.5a.2 | 13.1579 | 8.81579 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 23.6253 | 13.6456 | drosophila_melanogaster | FBpp0290398 | 6.93365 | 4.00478 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 23.4216 | 12.0163 | drosophila_melanogaster | FBpp0072910 | 7.51143 | 3.85369 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 8.75764 | 4.48065 | ciona_intestinalis | ENSCINP00000006261 | 9.51327 | 4.86726 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 75.7637 | 63.7475 | latimeria_chalumnae | ENSLACP00000021287 | 72.6562 | 61.1328 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 58.0448 | lepisosteus_oculatus | ENSLOCP00000017957 | 51.9878 | 43.578 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.8208 | 55.3971 | clupea_harengus | ENSCHAP00000002610 | 48.827 | 39.8827 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.0061 | 55.1935 | danio_rerio | ENSDARP00000153929 | 67.8351 | 55.8763 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 66.5988 | 54.3788 | carassius_auratus | ENSCARP00000005231 | 54.6823 | 44.6488 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.6171 | 55.6008 | carassius_auratus | ENSCARP00000057445 | 53.8961 | 44.3182 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.2098 | 55.3971 | carassius_auratus | ENSCARP00000068976 | 67.6229 | 55.7377 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.2281 | 55.1935 | astyanax_mexicanus | ENSAMXP00000037264 | 51.3804 | 41.5644 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.8208 | 55.3971 | ictalurus_punctatus | ENSIPUP00000014949 | 51.4683 | 42.0402 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 57.0265 | esox_lucius | ENSELUP00000006461 | 50.2209 | 41.2371 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 65.3768 | 53.7678 | electrophorus_electricus | ENSEEEP00000004518 | 66.875 | 55 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 56.6191 | oncorhynchus_kisutch | ENSOKIP00005037354 | 50.2941 | 40.8824 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.2118 | oncorhynchus_kisutch | ENSOKIP00005054925 | 50 | 40.4692 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 56.4155 | oncorhynchus_mykiss | ENSOMYP00000069577 | 49.8534 | 40.6158 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 56.4155 | oncorhynchus_mykiss | ENSOMYP00000098547 | 50.2941 | 40.7353 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 56.6191 | salmo_salar | ENSSSAP00000156864 | 50.6647 | 41.0635 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.6191 | salmo_salar | ENSSSAP00000126464 | 50 | 40.7625 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 56.6191 | salmo_trutta | ENSSTUP00000030406 | 50.6647 | 41.0635 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 56.8228 | salmo_trutta | ENSSTUP00000063606 | 49.8534 | 40.9091 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 66.3951 | 54.9898 | gadus_morhua | ENSGMOP00000024898 | 66.6667 | 55.2147 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 56.6191 | fundulus_heteroclitus | ENSFHEP00000009081 | 49.7076 | 40.6433 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.0428 | 57.2301 | poecilia_reticulata | ENSPREP00000011866 | 49.345 | 40.9025 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.8391 | 57.0265 | xiphophorus_maculatus | ENSXMAP00000033569 | 47.2067 | 39.1061 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.6171 | 56.4155 | oryzias_latipes | ENSORLP00000017879 | 66.4 | 55.4 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.0428 | 57.0265 | cyclopterus_lumpus | ENSCLMP00005001347 | 65.9533 | 54.4747 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.2301 | oreochromis_niloticus | ENSONIP00000071537 | 49.9274 | 40.7837 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.2648 | 57.2301 | haplochromis_burtoni | ENSHBUP00000018899 | 48.6601 | 39.6333 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.2648 | 57.2301 | astatotilapia_calliptera | ENSACLP00000027310 | 48.6601 | 39.6333 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 57.2301 | sparus_aurata | ENSSAUP00010048766 | 49.5665 | 40.6069 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 57.2301 | lates_calcarifer | ENSLCAP00010059093 | 49.2775 | 40.6069 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 75.9674 | 62.7291 | xenopus_tropicalis | ENSXETP00000101178 | 47.0366 | 38.8398 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 78.0041 | 64.3585 | chrysemys_picta_bellii | ENSCPBP00000014472 | 74.6589 | 61.5984 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 72.7088 | 61.7108 | sphenodon_punctatus | ENSSPUP00000014654 | 85.2029 | 72.315 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 74.5417 | 63.7475 | crocodylus_porosus | ENSCPRP00005013204 | 80.9734 | 69.2478 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.2648 | 56.6191 | laticauda_laticaudata | ENSLLTP00000008094 | 67.5147 | 54.4031 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.6191 | notechis_scutatus | ENSNSUP00000026537 | 69.3089 | 56.5041 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.4134 | 54.3788 | pseudonaja_textilis | ENSPTXP00000015007 | 69.8312 | 56.3291 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 73.7271 | 61.5071 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000009621 | 77.8495 | 64.9462 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 78.0041 | 65.3768 | gallus_gallus | ENSGALP00010037563 | 78.6448 | 65.9138 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 74.3381 | 61.7108 | meleagris_gallopavo | ENSMGAP00000004946 | 82.9545 | 68.8636 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 77.3931 | 63.1365 | serinus_canaria | ENSSCAP00000023049 | 78.1893 | 63.786 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 77.3931 | 64.1548 | parus_major | ENSPMJP00000021484 | 77.8689 | 64.5492 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 45.6212 | 38.6965 | anolis_carolinensis | ENSACAP00000008410 | 75.4209 | 63.9731 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 56.8228 | neolamprologus_brichardi | ENSNBRP00000010419 | 66.7969 | 54.4922 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.0428 | 56.6191 | naja_naja | ENSNNAP00000008045 | 72.9032 | 59.7849 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 75.9674 | 65.5804 | podarcis_muralis | ENSPMRP00000029390 | 76.2781 | 65.8487 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 72.7088 | 59.2668 | geospiza_fortis | ENSGFOP00000017760 | 82.8306 | 67.5174 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 77.8004 | 64.5621 | taeniopygia_guttata | ENSTGUP00000037275 | 78.6008 | 65.2263 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 58.2485 | erpetoichthys_calabaricus | ENSECRP00000033163 | 50.8929 | 42.5595 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.0428 | 57.0265 | kryptolebias_marmoratus | ENSKMAP00000002192 | 47.2145 | 38.9972 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 74.9491 | 63.7475 | salvator_merianae | ENSSMRP00000009425 | 74.9491 | 63.7475 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 57.2301 | oryzias_javanicus | ENSOJAP00000010187 | 50 | 41.3235 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 56.8228 | amphilophus_citrinellus | ENSACIP00000006565 | 68.1909 | 55.4672 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.2301 | dicentrarchus_labrax | ENSDLAP00005057675 | 49.711 | 40.6069 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.8391 | 56.2118 | amphiprion_percula | ENSAPEP00000011276 | 65.8869 | 53.8012 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 57.2301 | oryzias_sinensis | ENSOSIP00000049180 | 50.295 | 41.4454 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 54.9898 | 45.0102 | pelodiscus_sinensis | ENSPSIP00000009985 | 81.3253 | 66.5663 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 52.5458 | 43.3809 | gopherus_evgoodei | ENSGEVP00005011552 | 83.4951 | 68.932 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 52.9532 | 43.5845 | chelonoidis_abingdonii | ENSCABP00000011335 | 84.4156 | 69.4805 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 57.4338 | seriola_dumerili | ENSSDUP00000010165 | 49.3507 | 40.6926 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.4134 | 55.6008 | cottoperca_gobio | ENSCGOP00000032861 | 70.8779 | 58.4582 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 57.4338 | struthio_camelus_australis | ENSSCUP00000020249 | 81.9277 | 67.9518 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 73.7271 | 60.6925 | anser_brachyrhynchus | ENSABRP00000017635 | 79.0393 | 65.0655 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 63.9511 | 52.1385 | gasterosteus_aculeatus | ENSGACP00000019297 | 72.1839 | 58.8506 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 57.0265 | cynoglossus_semilaevis | ENSCSEP00000017456 | 50.8982 | 41.9162 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.2281 | 56.8228 | poecilia_formosa | ENSPFOP00000014188 | 65.0485 | 54.1748 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 57.8411 | myripristis_murdjan | ENSMMDP00005044692 | 49.3525 | 40.8633 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.2648 | 57.6375 | sander_lucioperca | ENSSLUP00000034798 | 49.8555 | 40.896 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 50.5092 | 40.9369 | strigops_habroptila | ENSSHBP00005024497 | 80.5195 | 65.2597 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.6191 | amphiprion_ocellaris | ENSAOCP00000005829 | 49.492 | 40.3483 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 74.5417 | 62.3218 | terrapene_carolina_triunguis | ENSTMTP00000031443 | 78.2051 | 65.3846 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 56.8228 | hucho_hucho | ENSHHUP00000011363 | 50 | 41.0294 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 57.0265 | hucho_hucho | ENSHHUP00000047279 | 50.2933 | 41.0557 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.6375 | betta_splendens | ENSBSLP00000031367 | 48.519 | 39.9154 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.6171 | 54.9898 | pygocentrus_nattereri | ENSPNAP00000030932 | 55.1495 | 44.8505 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.0265 | anabas_testudineus | ENSATEP00000005666 | 49.2837 | 40.1146 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 5.49898 | 3.46232 | ciona_savignyi | ENSCSAVP00000015209 | 11.6883 | 7.35931 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 57.4338 | seriola_lalandi_dorsalis | ENSSLDP00000021286 | 49.3488 | 40.8104 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 66.5988 | 54.7862 | labrus_bergylta | ENSLBEP00000000213 | 65.2695 | 53.6926 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 56.8228 | pundamilia_nyererei | ENSPNYP00000012974 | 66.7969 | 54.4922 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.8574 | 57.0265 | mastacembelus_armatus | ENSMAMP00000007708 | 49.6382 | 40.521 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.6191 | stegastes_partitus | ENSSPAP00000027192 | 49.3488 | 40.2315 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.6538 | 56.8228 | oncorhynchus_tshawytscha | ENSOTSP00005029771 | 50.2203 | 40.9692 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 56.4155 | oncorhynchus_tshawytscha | ENSOTSP00005030123 | 50 | 40.6158 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 56.6191 | acanthochromis_polyacanthus | ENSAPOP00000033287 | 49.3469 | 40.3483 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 78.8187 | 64.1548 | aquila_chrysaetos_chrysaetos | ENSACCP00020007468 | 76.3314 | 62.1302 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.4501 | 57.0265 | nothobranchius_furzeri | ENSNFUP00015049273 | 48.924 | 40.1722 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.8391 | 56.2118 | cyprinodon_variegatus | ENSCVAP00000025097 | 50.5232 | 41.2556 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 60.2851 | 48.4725 | denticeps_clupeoides | ENSDCDP00000054479 | 51.3889 | 41.3194 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 65.7841 | 52.9532 | denticeps_clupeoides | ENSDCDP00000051409 | 53.6545 | 43.1894 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.4338 | larimichthys_crocea | ENSLCRP00005014032 | 50.1458 | 41.1079 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.8208 | 55.8045 | takifugu_rubripes | ENSTRUP00000084536 | 49.7015 | 40.8955 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 51.7312 | 42.1589 | ficedula_albicollis | ENSFALP00000032987 | 82.2006 | 66.9903 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.8208 | 55.1935 | hippocampus_comes | ENSHCOP00000000428 | 64.6602 | 52.6214 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.0061 | 55.6008 | cyprinus_carpio_carpio | ENSCCRP00000120608 | 55.3872 | 45.9596 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.4134 | 55.1935 | cyprinus_carpio_carpio | ENSCCRP00000178099 | 52.96 | 43.36 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 77.5967 | 65.7841 | coturnix_japonica | ENSCJPP00005015311 | 78.719 | 66.7355 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.8391 | 57.2301 | poecilia_latipinna | ENSPLAP00000008530 | 48.8439 | 40.6069 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.2098 | 55.1935 | sinocyclocheilus_grahami | ENSSGRP00000098094 | 55 | 45.1667 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 65.1731 | 54.1752 | sinocyclocheilus_grahami | ENSSGRP00000018401 | 69.1145 | 57.4514 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.2648 | 57.2301 | maylandia_zebra | ENSMZEP00005007534 | 48.6601 | 39.6333 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 65.9878 | 54.3788 | tetraodon_nigroviridis | ENSTNIP00000014885 | 69.6774 | 57.4194 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 57.6375 | paramormyrops_kingsleyae | ENSPKIP00000002051 | 49.8534 | 41.4956 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.0061 | 56.2118 | paramormyrops_kingsleyae | ENSPKIP00000019277 | 49.3253 | 41.3793 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 68.6354 | 57.0265 | scleropages_formosus | ENSSFOP00015061618 | 64.8077 | 53.8462 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 67.6171 | 56.0081 | scleropages_formosus | ENSSFOP00015058148 | 50.6098 | 41.9207 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 74.5417 | 59.6741 | leptobrachium_leishanense | ENSLLEP00000007959 | 44.908 | 35.9509 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 70.0611 | 57.0265 | scophthalmus_maximus | ENSSMAP00000016244 | 49.6392 | 40.404 |
ENSG00000166173 | homo_sapiens | ENSP00000299213 | 69.2464 | 57.4338 | oryzias_melastigma | ENSOMEP00000031928 | 50 | 41.4706 |
Gene Ontology
Go ID | Go term | No. evidence | Entries | Species | Category |
---|---|---|---|---|---|
GO:0003729 | enables mRNA binding | 1 | IBA | Homo_sapiens(9606) | Function |
GO:0005515 | enables protein binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0005634 | is_active_in nucleus | 2 | IBA,IDA | Homo_sapiens(9606) | Component |
GO:0005737 | located_in cytoplasm | 1 | IEA | Homo_sapiens(9606) | Component |
GO:0005844 | part_of polysome | 3 | IBA,IDA,IMP | Homo_sapiens(9606) | Component |
GO:0006396 | involved_in RNA processing | 1 | IEA | Homo_sapiens(9606) | Process |
GO:0017022 | enables myosin binding | 1 | IPI | Homo_sapiens(9606) | Function |
GO:0032967 | involved_in positive regulation of collagen biosynthetic process | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0035613 | enables RNA stem-loop binding | 2 | IDA,IMP | Homo_sapiens(9606) | Function |
GO:0045727 | involved_in positive regulation of translation | 1 | IMP | Homo_sapiens(9606) | Process |
GO:0048027 | enables mRNA 5-UTR binding | 2 | IDA,IMP | Homo_sapiens(9606) | Function |
GO:1902416 | involved_in positive regulation of mRNA binding | 2 | IDA,IMP | Homo_sapiens(9606) | Process |
GO:1990825 | enables sequence-specific mRNA binding | 1 | IDA | Homo_sapiens(9606) | Function |
GO:1990904 | part_of ribonucleoprotein complex | 2 | IDA,IMP | Homo_sapiens(9606) | Component |