Functions and Diseases

RBP Type Canonical_RBPs
Diseases Cancer Disease
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000165821 Gene ID 6297 Accession 10526
Symbol SALL2 Alias COLB;HSAL2;Sal-2;ZNF795;p150(Sal2) Full Name spalt like transcription factor 2
Status Confidence Length 16137 bases Strand Minus strand
Position 14 : 21521080 - 21537216 RNA binding domain zf-met
Summary This gene encodes a protein containing multiple zinc finger domains. The encoded protein functions in optical fissure closure during development of the eye in the embryo. Mutations in this gene are associated with ocular coloboma. [provided by RefSeq, Jul 2016]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000438493 zf-met PF12874 1.9e-10 1
ENSP00000438493 zf-met PF12874 1.9e-10 2
ENSP00000483562 zf-met PF12874 1.9e-10 1
ENSP00000483562 zf-met PF12874 1.9e-10 2
ENSP00000440054 zf-met PF12874 4.4e-10 1
ENSP00000440054 zf-met PF12874 4.4e-10 2
ENSP00000396773 zf-met PF12874 4.6e-10 1
ENSP00000396773 zf-met PF12874 4.6e-10 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SALL2-202 ENST00000537235 4861 1005aa ENSP00000438493
SALL2-207 ENST00000614342 4942 1007aa ENSP00000483562
SALL2-206 ENST00000613414 1566 200aa ENSP00000483202
SALL2-205 ENST00000611430 1466 198aa ENSP00000484460
SALL2-204 ENST00000546363 3094 902aa ENSP00000440054
SALL2-201 ENST00000450879 3178 906aa ENSP00000396773
SALL2-203 ENST00000541965 553 99aa ENSP00000439654

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
29206Cholesterol, HDL6.9530000E-005-
39144Platelet Function Tests2.6896700E-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000165821homo_sapiensENSP0000034773015.46159.07692homo_sapiensENSP000004384932011.7413
ENSG00000165821homo_sapiensENSP000003692709.81636.08496homo_sapiensENSP0000043849317.014910.5473
ENSG00000165821homo_sapiensENSP000003616648.769745.48628homo_sapiensENSP0000043849320.99513.1343
ENSG00000165821homo_sapiensENSP0000049616818.203610.1796homo_sapiensENSP0000043849315.12448.45771
ENSG00000165821homo_sapiensENSP0000025102031.117822.2054homo_sapiensENSP0000043849340.99529.2537
ENSG00000165821homo_sapiensENSP0000036052612.56.96565homo_sapiensENSP0000043849313.03487.26368
ENSG00000165821homo_sapiensENSP000003600698.586765.3071homo_sapiensENSP0000043849314.32848.85572
ENSG00000165821homo_sapiensENSP0000034972316.33118.83669homo_sapiensENSP0000043849314.52747.8607
ENSG00000165821homo_sapiensENSP0000044182330.846222.6154homo_sapiensENSP0000043849339.900529.2537
ENSG00000165821homo_sapiensENSP0000035420621.329612.7424homo_sapiensENSP0000043849315.32349.15423
ENSG00000165821homo_sapiensENSP0000039475712.46787.13672homo_sapiensENSP0000043849314.42798.25871
ENSG00000165821homo_sapiensENSP000003565757.72694.45625homo_sapiensENSP0000043849318.80610.8458
ENSG00000165821homo_sapiensENSP0000021708633.998122.6971homo_sapiensENSP0000043849335.621923.7811
ENSG00000165821homo_sapiensENSP000003686988.609274.74614homo_sapiensENSP0000043849323.283612.8358

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000165821homo_sapiensENSP0000043849397.711497.1144nomascus_leucogenysENSNLEP0000001775797.420696.8254
ENSG00000165821homo_sapiensENSP0000043849398.20997.8109pan_paniscusENSPPAP0000003053998.111397.7137
ENSG00000165821homo_sapiensENSP0000043849396.318495.8209pongo_abeliiENSPPYP0000000637092.898392.4184
ENSG00000165821homo_sapiensENSP0000043849398.109597.6119pan_troglodytesENSPTRP0000001039797.914697.4181
ENSG00000165821homo_sapiensENSP0000043849398.009997.5124gorilla_gorillaENSGGOP0000002336897.912597.4155
ENSG00000165821homo_sapiensENSP0000043849367.960262.2886ornithorhynchus_anatinusENSOANP0000003730468.989963.2323
ENSG00000165821homo_sapiensENSP0000043849383.184178.1095sarcophilus_harrisiiENSSHAP0000003908467.637563.5113
ENSG00000165821homo_sapiensENSP0000043849378.009972.9353notamacropus_eugeniiENSMEUP0000000047585.032579.5011
ENSG00000165821homo_sapiensENSP0000043849387.761284.6766dasypus_novemcinctusENSDNOP0000003410383.601980.6635
ENSG00000165821homo_sapiensENSP0000043849392.736392.3383callithrix_jacchusENSCJAP0000008710791.732391.3386
ENSG00000165821homo_sapiensENSP0000043849397.711497.2139cercocebus_atysENSCATP0000004583397.324196.8285
ENSG00000165821homo_sapiensENSP0000043849395.124494.5274macaca_fascicularisENSMFAP0000001914375.157274.6855
ENSG00000165821homo_sapiensENSP0000043849378.40878.1095macaca_mulattaENSMMUP0000005562890.783490.4378
ENSG00000165821homo_sapiensENSP0000043849394.825994.2289macaca_nemestrinaENSMNEP0000001221091.196290.622
ENSG00000165821homo_sapiensENSP0000043849394.726493.8308papio_anubisENSPANP0000001462991.100590.2392
ENSG00000165821homo_sapiensENSP0000043849397.810997.3134mandrillus_leucophaeusENSMLEP0000002456297.423296.9277
ENSG00000165821homo_sapiensENSP0000043849391.442889.5522tursiops_truncatusENSTTRP0000001217991.716689.8204
ENSG00000165821homo_sapiensENSP0000043849391.442888.5572mus_spretusMGP_SPRETEiJ_P003834691.533988.6454
ENSG00000165821homo_sapiensENSP0000043849394.527492.8358equus_asinusENSEASP0000501668394.339692.6514
ENSG00000165821homo_sapiensENSP0000043849391.741389.9502capra_hircusENSCHIP0000003146091.924290.1296
ENSG00000165821homo_sapiensENSP0000043849393.432891.1443loxodonta_africanaENSLAFP0000002385093.525991.2351
ENSG00000165821homo_sapiensENSP0000043849393.233891.3433panthera_leoENSPLOP0000001345692.864290.9812
ENSG00000165821homo_sapiensENSP0000043849390.547387.7612ailuropoda_melanoleucaENSAMEP0000003871082.577180.0363
ENSG00000165821homo_sapiensENSP0000043849392.139390.5473bos_indicus_hybridENSBIXP0000503937292.32390.7278
ENSG00000165821homo_sapiensENSP0000043849392.935390.7463oryctolagus_cuniculusENSOCUP0000001906992.566990.3865
ENSG00000165821homo_sapiensENSP0000043849394.726493.3333equus_caballusENSECAP0000002192394.444493.0556
ENSG00000165821homo_sapiensENSP0000043849381.79176.6169canis_lupus_familiarisENSCAFP0084503719783.367178.0933
ENSG00000165821homo_sapiensENSP0000043849393.233891.3433panthera_pardusENSPPRP0000001182792.864290.9812
ENSG00000165821homo_sapiensENSP0000043849394.228992.0398marmota_marmota_marmotaENSMMMP0000001601394.041791.857
ENSG00000165821homo_sapiensENSP0000043849393.731391.7413balaenoptera_musculusENSBMSP0001001335293.638291.6501
ENSG00000165821homo_sapiensENSP0000043849391.542389.2537cavia_porcellusENSCPOP0000002388991.360589.0765
ENSG00000165821homo_sapiensENSP0000043849391.343389.5522felis_catusENSFCAP0000004494483.378781.7439
ENSG00000165821homo_sapiensENSP0000043849385.771183.3831ursus_americanusENSUAMP0000003710482.80580.4995
ENSG00000165821homo_sapiensENSP0000043849385.273679.3035monodelphis_domesticaENSMODP0000004721081.774876.0496
ENSG00000165821homo_sapiensENSP0000043849376.318474.8259bison_bison_bisonENSBBBP0000000581984.845183.1858
ENSG00000165821homo_sapiensENSP0000043849393.233891.5423monodon_monocerosENSMMNP0001501376993.233891.5423
ENSG00000165821homo_sapiensENSP0000043849388.656786.9652sus_scrofaENSSSCP0000003567286.504984.8544
ENSG00000165821homo_sapiensENSP0000043849394.527493.2338microcebus_murinusENSMICP0000001370394.527493.2338
ENSG00000165821homo_sapiensENSP0000043849391.940389.7512octodon_degusENSODEP0000000185692.031989.8406
ENSG00000165821homo_sapiensENSP0000043849390.845887.4627jaculus_jaculusENSJJAP0000000005591.117887.7245
ENSG00000165821homo_sapiensENSP0000043849391.840890.2488ovis_aries_rambouilletENSOARP0002002324392.023990.4287
ENSG00000165821homo_sapiensENSP0000043849388.557286.1692ursus_maritimusENSUMAP0000000632692.323789.834
ENSG00000165821homo_sapiensENSP0000043849394.328492.9353delphinapterus_leucasENSDLEP0000000331294.516493.1206
ENSG00000165821homo_sapiensENSP0000043849394.129492.4378physeter_catodonENSPCTP0000500950394.505592.8072
ENSG00000165821homo_sapiensENSP0000043849391.243888.3582mus_caroliMGP_CAROLIEiJ_P003662491.334788.4462
ENSG00000165821homo_sapiensENSP0000043849391.442888.4577mus_musculusENSMUSP0000005640191.533988.5458
ENSG00000165821homo_sapiensENSP0000043849391.840889.4527dipodomys_ordiiENSDORP0000001736090.846588.4843
ENSG00000165821homo_sapiensENSP0000043849392.437890.2488mustela_putorius_furoENSMPUP0000000019683.996482.0072
ENSG00000165821homo_sapiensENSP0000043849389.353288.1592aotus_nancymaaeENSANAP0000002716890.251389.0452
ENSG00000165821homo_sapiensENSP0000043849396.815995.7214saimiri_boliviensis_boliviensisENSSBOP0000002411296.432195.3419
ENSG00000165821homo_sapiensENSP0000043849378.706578.3085chlorocebus_sabaeusENSCSAP0000001252491.12990.6682
ENSG00000165821homo_sapiensENSP0000043849390.945387.9602mesocricetus_auratusENSMAUP0000001409490.854987.8728
ENSG00000165821homo_sapiensENSP0000043849393.034891.3433phocoena_sinusENSPSNP0000002157493.034891.3433
ENSG00000165821homo_sapiensENSP0000043849393.631891.7413camelus_dromedariusENSCDRP0000500403493.353291.4683
ENSG00000165821homo_sapiensENSP0000043849384.079682.2886carlito_syrichtaENSTSYP0000001551283.251281.4778
ENSG00000165821homo_sapiensENSP0000043849390.348388.4577panthera_tigris_altaicaENSPTIP0000002116392.558690.6218
ENSG00000165821homo_sapiensENSP0000043849391.144388.3582rattus_norvegicusENSRNOP0000001773091.235188.4462
ENSG00000165821homo_sapiensENSP0000043849380.19978.9055prolemur_simusENSPSMP0000001433388.087486.6667
ENSG00000165821homo_sapiensENSP0000043849389.651786.9652microtus_ochrogasterENSMOCP0000000421290.918388.1937
ENSG00000165821homo_sapiensENSP0000043849392.437889.7512peromyscus_maniculatus_bairdiiENSPEMP0000002607092.254289.573
ENSG00000165821homo_sapiensENSP0000043849392.139390.5473bos_mutusENSBMUP0000002356992.32390.7278
ENSG00000165821homo_sapiensENSP0000043849391.542388.6567mus_spicilegusENSMSIP0000002522491.633588.745
ENSG00000165821homo_sapiensENSP0000043849390.945388.5572cricetulus_griseus_chok1gshdENSCGRP0000100015091.308788.9111
ENSG00000165821homo_sapiensENSP0000043849390.049887.4627pteropus_vampyrusENSPVAP0000000025489.960287.3757
ENSG00000165821homo_sapiensENSP0000043849393.233890.9453myotis_lucifugusENSMLUP0000000837692.406390.1381
ENSG00000165821homo_sapiensENSP0000043849383.582177.8109vombatus_ursinusENSVURP0001002647175.880870.6414
ENSG00000165821homo_sapiensENSP0000043849394.328492.9353rhinolophus_ferrumequinumENSRFEP0001002956993.954492.5669
ENSG00000165821homo_sapiensENSP0000043849394.527492.7363neovison_visonENSNVIP0000001963493.873592.0949
ENSG00000165821homo_sapiensENSP0000043849389.452787.6617bos_taurusENSBTAP0000006669181.801680.1638
ENSG00000165821homo_sapiensENSP0000043849393.034891.3433heterocephalus_glaber_femaleENSHGLP0000005923093.127591.4343
ENSG00000165821homo_sapiensENSP0000043849383.184182.5871rhinopithecus_bietiENSRBIP0000000182096.983896.2877
ENSG00000165821homo_sapiensENSP0000043849382.089677.0149canis_lupus_dingoENSCAFP0002001922283.50278.3401
ENSG00000165821homo_sapiensENSP0000043849394.427991.4428sciurus_vulgarisENSSVLP0000500076794.33491.3519
ENSG00000165821homo_sapiensENSP0000043849385.373179.204phascolarctos_cinereusENSPCIP0000005456584.866578.7339
ENSG00000165821homo_sapiensENSP0000043849383.781181.592procavia_capensisENSPCAP0000000620783.781181.592
ENSG00000165821homo_sapiensENSP0000043849391.641889.1542nannospalax_galiliENSNGAP0000001238891.550789.0656
ENSG00000165821homo_sapiensENSP0000043849391.442889.2537chinchilla_lanigeraENSCLAP0000000189791.716689.521
ENSG00000165821homo_sapiensENSP0000043849389.353287.6617cervus_hanglu_yarkandensisENSCHYP0000001467781.785180.2368
ENSG00000165821homo_sapiensENSP0000043849395.024993.4328catagonus_wagneriENSCWAP0000000600095.214493.6191
ENSG00000165821homo_sapiensENSP0000043849395.124493.0348ictidomys_tridecemlineatusENSSTOP0000002611194.373192.3001
ENSG00000165821homo_sapiensENSP0000043849394.726492.8358otolemur_garnettiiENSOGAP0000002059294.444492.5595
ENSG00000165821homo_sapiensENSP0000043849396.517495.7214cebus_imitatorENSCCAP0000003048596.134895.3419
ENSG00000165821homo_sapiensENSP0000043849394.328491.9403urocitellus_parryiiENSUPAP0001000309894.14191.7577
ENSG00000165821homo_sapiensENSP0000043849393.233891.9403moschus_moschiferusENSMMSP0000000885093.606492.3077
ENSG00000165821homo_sapiensENSP0000043849390.547388.4577rhinopithecus_roxellanaENSRROP0000002297492.105389.9798
ENSG00000165821homo_sapiensENSP0000043849391.243888.0597mus_pahariMGP_PahariEiJ_P008474191.425788.2353
ENSG00000165821homo_sapiensENSP0000043849394.228993.0348propithecus_coquereliENSPCOP0000001148894.228993.0348
ENSG00000165821homo_sapiensENSP0000043849313.03487.16418caenorhabditis_elegansF13H6.1b.118.876110.3746
ENSG00000165821homo_sapiensENSP0000043849319.20412.0398caenorhabditis_elegansF15C11.1.125.940916.2634
ENSG00000165821homo_sapiensENSP0000043849317.01499.35323drosophila_melanogasterFBpp042318713.63647.49601
ENSG00000165821homo_sapiensENSP0000043849327.562217.7114drosophila_melanogasterFBpp029793621.862714.0489
ENSG00000165821homo_sapiensENSP0000043849330.646820drosophila_melanogasterFBpp008885222.564114.7253
ENSG00000165821homo_sapiensENSP0000043849312.43788.35821ciona_intestinalisENSCINP0000002679717.908312.0344
ENSG00000165821homo_sapiensENSP0000043849325.273617.4129ciona_intestinalisENSCINP0000002461728.066319.337
ENSG00000165821homo_sapiensENSP0000043849320.59711.8408ciona_intestinalisENSCINP0000000785923.416313.4615
ENSG00000165821homo_sapiensENSP0000043849343.283629.3532carassius_auratusENSCARP0000012085537.793225.6299
ENSG00000165821homo_sapiensENSP0000043849352.039846.7662chrysemys_picta_belliiENSCPBP0000001732564.171857.6687
ENSG00000165821homo_sapiensENSP0000043849356.616949.8507sphenodon_punctatusENSSPUP0000001303760.531953.2979
ENSG00000165821homo_sapiensENSP0000043849355.323447.5622laticauda_laticaudataENSLLTP0000001741458.280950.1048
ENSG00000165821homo_sapiensENSP0000043849348.756240.4975notechis_scutatusENSNSUP0000000949257.988248.1657
ENSG00000165821homo_sapiensENSP0000043849316.019913.9303pseudonaja_textilisENSPTXP0000002278764.919456.4516
ENSG00000165821homo_sapiensENSP0000043849354.825947.1642pseudonaja_textilisENSPTXP0000002236162.189653.4989
ENSG00000165821homo_sapiensENSP0000043849331.940321.194gallus_gallusENSGALP0001000482316.975111.2639
ENSG00000165821homo_sapiensENSP0000043849322.686620anolis_carolinensisENSACAP0000003069670.153861.8462
ENSG00000165821homo_sapiensENSP0000043849345.373138.408naja_najaENSNNAP0000001898565.049955.0642
ENSG00000165821homo_sapiensENSP0000043849348.258741.4925naja_najaENSNNAP0000000808863.315954.4386
ENSG00000165821homo_sapiensENSP0000043849355.920448.9552podarcis_muralisENSPMRP0000002138655.976149.004
ENSG00000165821homo_sapiensENSP0000043849310.74637.56219taeniopygia_guttataENSTGUP0000002717621.428615.0794
ENSG00000165821homo_sapiensENSP0000043849311.64186.16915erpetoichthys_calabaricusENSECRP0000000011916.258.61111
ENSG00000165821homo_sapiensENSP0000043849355.920449.5522salvator_merianaeENSSMRP0000000641257.759551.1819
ENSG00000165821homo_sapiensENSP0000043849355.422948.7562gopherus_evgoodeiENSGEVP0000502205663.151955.5556
ENSG00000165821homo_sapiensENSP0000043849346.965241.8905chelonoidis_abingdoniiENSCABP0000001478557.985351.7199
ENSG00000165821homo_sapiensENSP0000043849335.422923.5821strigops_habroptilaENSSHBP0000501780938.115625.3747
ENSG00000165821homo_sapiensENSP0000043849349.751243.4826terrapene_carolina_triunguisENSTMTP0000001351757.937450.6373
ENSG00000165821homo_sapiensENSP0000043849315.522410.5473ciona_savignyiENSCSAVP0000001600022.222215.0997
ENSG00000165821homo_sapiensENSP0000043849319.80111.5423ciona_savignyiENSCSAVP0000001812923.775413.859
ENSG00000165821homo_sapiensENSP0000043849343.184129.6517cyprinus_carpio_carpioENSCCRP0000010787437.804925.9582
ENSG00000165821homo_sapiensENSP0000043849329.751219.9005coturnix_japonicaENSCJPP0000500190017.776511.8906

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000977enables RNA polymerase II transcription regulatory region sequence-specific DNA binding1IDAHomo_sapiens(9606)Function
GO:0000978enables RNA polymerase II cis-regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0000981enables DNA-binding transcription factor activity, RNA polymerase II-specific1IBAHomo_sapiens(9606)Function
GO:0001228enables DNA-binding transcription activator activity, RNA polymerase II-specific2IDA,IMPHomo_sapiens(9606)Function
GO:0001654involved_in eye development1IDAHomo_sapiens(9606)Process
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0045944involved_in positive regulation of transcription by RNA polymerase II1IMPHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function

Expression