Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug Drug
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000165806 Gene ID 840 Accession 1508
Symbol CASP7 Alias MCH3;CMH-1;LICE2;CASP-7;ICE-LAP3 Full Name caspase 7
Status Confidence Length 51746 bases Strand Plus strand
Position 10 : 113679162 - 113730907 RNA binding domain N.A.
Summary This gene encodes a member of the cysteine-aspartic acid protease (caspase) family. Sequential activation of caspases plays a central role in the execution-phase of cell apoptosis. Caspases exist as inactive proenzymes which undergo proteolytic processing at conserved aspartic residues to produce two subunits, large and small, that dimerize to form the active enzyme. The precursor of the encoded protein is cleaved by caspase 3 and 10, is activated upon cell death stimuli and induces apoptosis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, May 2012]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
24040159 Potentially functional polymorphisms in the CASP7 gene contribute to gastric adenocarcinoma susceptibility in an eastern Chinese population. Meng-Yun Wang 2013-01-01 PloS one

Transcripts

Name Transcript ID bp Protein Translation ID
CASP7-211 ENST00000621345 2467 303aa ENSP00000480584
CASP7-206 ENST00000429617 834 222aa ENSP00000400094
CASP7-205 ENST00000369331 2380 253aa ENSP00000358337
CASP7-201 ENST00000345633 2659 303aa ENSP00000298701
CASP7-204 ENST00000369321 2620 388aa ENSP00000358327
CASP7-210 ENST00000614447 2555 253aa ENSP00000478285
CASP7-203 ENST00000369318 2344 303aa ENSP00000358324
CASP7-202 ENST00000369315 2421 303aa ENSP00000358321
CASP7-212 ENST00000621607 2378 336aa ENSP00000478999
CASP7-213 ENST00000672138 2351 302aa ENSP00000500735
CASP7-207 ENST00000452490 2271 278aa ENSP00000398107
CASP7-208 ENST00000468790 607 No protein -
CASP7-209 ENST00000487232 799 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
30888Erythrocyte Indices3.0510000E-007-
76243Vitiligo4E-822561518

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003723enables RNA binding1IDAHomo_sapiens(9606)Function
GO:0004190enables aspartic-type endopeptidase activity1IEAHomo_sapiens(9606)Function
GO:0004197enables cysteine-type endopeptidase activity1IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005615is_active_in extracellular space1TASHomo_sapiens(9606)Component
GO:0005634is_active_in nucleus2IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm1TASHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm2IBA,IDAHomo_sapiens(9606)Component
GO:0005829is_active_in cytosol3IDA,TASHomo_sapiens(9606)Component
GO:0006508involved_in proteolysis1IDAHomo_sapiens(9606)Process
GO:0006915involved_in apoptotic process2IBA,IDAHomo_sapiens(9606)Process
GO:0007507involved_in heart development1IEAHomo_sapiens(9606)Process
GO:0008233enables peptidase activity1IDAHomo_sapiens(9606)Function
GO:0008234enables cysteine-type peptidase activity1TASHomo_sapiens(9606)Function
GO:0009411involved_in response to UV1IEAHomo_sapiens(9606)Process
GO:0016485involved_in protein processing1IEAHomo_sapiens(9606)Process
GO:0030163involved_in protein catabolic process1IDAHomo_sapiens(9606)Process
GO:0032991part_of protein-containing complex1IEAHomo_sapiens(9606)Component
GO:0042742involved_in defense response to bacterium1IEAHomo_sapiens(9606)Process
GO:0044346involved_in fibroblast apoptotic process1IEAHomo_sapiens(9606)Process
GO:0051146involved_in striated muscle cell differentiation1IEAHomo_sapiens(9606)Process
GO:0051402involved_in neuron apoptotic process1IEAHomo_sapiens(9606)Process
GO:0051604involved_in protein maturation1IDAHomo_sapiens(9606)Process
GO:0070227involved_in lymphocyte apoptotic process1ISSHomo_sapiens(9606)Process
GO:0071222involved_in cellular response to lipopolysaccharide1IDAHomo_sapiens(9606)Process
GO:0072734involved_in cellular response to staurosporine1IMPHomo_sapiens(9606)Process
GO:0097153enables cysteine-type endopeptidase activity involved in apoptotic process2IDA,ISSHomo_sapiens(9606)Function
GO:0097194involved_in execution phase of apoptosis2IBA,IDAHomo_sapiens(9606)Process
GO:0097200enables cysteine-type endopeptidase activity involved in execution phase of apoptosis3IBA,IDA,IMPHomo_sapiens(9606)Function
GO:1905686involved_in positive regulation of plasma membrane repair1IEAHomo_sapiens(9606)Process

Expression