Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations Stress granucle
BulkPerturb-seq

Description

Ensembl ID ENSG00000163918 Gene ID 5984 Accession 9972
Symbol RFC4 Alias A1;RFC37 Full Name replication factor C subunit 4
Status Confidence Length 17179 bases Strand Minus strand
Position 3 : 186789880 - 186807058 RNA binding domain N.A.
Summary The elongation of primed DNA templates by DNA polymerase delta and DNA polymerase epsilon requires the accessory proteins proliferating cell nuclear antigen (PCNA) and replication factor C (RFC). RFC, also named activator 1, is a protein complex consisting of five distinct subunits of 140, 40, 38, 37, and 36 kD. This gene encodes the 37 kD subunit. This subunit forms a core complex with the 36 and 40 kDa subunits. The core complex possesses DNA-dependent ATPase activity, which was found to be stimulated by PCNA in an in vitro system. Alternatively spliced transcript variants encoding the same protein have been reported. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RFC4-207 ENST00000433496 1111 336aa ENSP00000399769
RFC4-211 ENST00000479307 1043 No protein -
RFC4-202 ENST00000392481 1448 363aa ENSP00000376272
RFC4-201 ENST00000296273 1365 363aa ENSP00000296273
RFC4-204 ENST00000417876 479 111aa ENSP00000401429
RFC4-213 ENST00000494047 1393 No protein -
RFC4-210 ENST00000460408 628 No protein -
RFC4-205 ENST00000418288 701 214aa ENSP00000411300
RFC4-209 ENST00000449502 799 97aa ENSP00000394870
RFC4-212 ENST00000489028 533 No protein -
RFC4-206 ENST00000427785 485 123aa ENSP00000407982
RFC4-208 ENST00000448497 453 95aa ENSP00000415099
RFC4-203 ENST00000411792 560 43aa ENSP00000399314

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
65326Adiponectin1E-1920876611
71085Adiponectin2E-2224105470
81018Adiponectin4E-726299439
81779Adiponectin8E-626299439
90226Adiponectin3E-1220011104
91261Adiponectin2E-4222479202

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003677enables DNA binding1IEAHomo_sapiens(9606)Function
GO:0003689contributes_to DNA clamp loader activity2IBA,IDAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005524enables ATP binding1IEAHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0005663part_of DNA replication factor C complex2IBA,IDAHomo_sapiens(9606)Component
GO:0006261involved_in DNA-templated DNA replication1IBAHomo_sapiens(9606)Process
GO:0006271involved_in DNA strand elongation involved in DNA replication1TASHomo_sapiens(9606)Process
GO:0006281involved_in DNA repair1IBAHomo_sapiens(9606)Process
GO:0016887enables ATP hydrolysis activity1IEAHomo_sapiens(9606)Function
GO:0017116contributes_to single-stranded DNA helicase activity1IDAHomo_sapiens(9606)Function
GO:0031390part_of Ctf18 RFC-like complex1IDAHomo_sapiens(9606)Component
GO:0031391part_of Elg1 RFC-like complex1IDAHomo_sapiens(9606)Component
GO:0032508involved_in DNA duplex unwinding1IEAHomo_sapiens(9606)Process
GO:1900264involved_in positive regulation of DNA-directed DNA polymerase activity1IDAHomo_sapiens(9606)Process

Expression