Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs rRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000163319 Gene ID 51023 Accession 16633
Symbol MRPS18C Alias bS18m;CGI-134;S18mt-c;MRPS18-1;mrps18-c;MRP-S18-1;MRP-S18-c Full Name mitochondrial ribosomal protein S18C
Status Confidence Length 11522 bases Strand Plus strand
Position 4 : 83455983 - 83467504 RNA binding domain Ribosomal_S18
Summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S18P family. The encoded protein is one of three that has significant sequence similarity to bacterial S18 proteins. The primary sequences of the three human mitochondrial S18 proteins are no more closely related to each other than they are to the prokaryotic S18 proteins. Pseudogenes corresponding to this gene are found on chromosomes 8p, 12p, 15q, and 22q. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000295491 Ribosomal_S18 PF01084 1.1e-22 1
ENSP00000427014 Ribosomal_S18 PF01084 4.6e-17 1
ENSP00000427169 Ribosomal_S18 PF01084 4.8e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
MRPS18C-208 ENST00000512375 2482 No protein -
MRPS18C-204 ENST00000507019 666 114aa ENSP00000427169
MRPS18C-205 ENST00000507349 350 68aa ENSP00000426930
MRPS18C-201 ENST00000295491 1550 142aa ENSP00000295491
MRPS18C-207 ENST00000509970 855 113aa ENSP00000427014
MRPS18C-203 ENST00000505719 490 92aa ENSP00000425268
MRPS18C-202 ENST00000505525 442 No protein -
MRPS18C-209 ENST00000514581 301 No protein -
MRPS18C-206 ENST00000509571 442 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
21466Extraversion (Psychology)3.601e-005-

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000163319

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000163319homo_sapiensENSP0000029549197.887396.4789nomascus_leucogenysENSNLEP0000003590196.527895.1389
ENSG00000163319homo_sapiensENSP00000295491100100pan_paniscusENSPPAP00000028132100100
ENSG00000163319homo_sapiensENSP0000029549198.591697.8873pongo_abeliiENSPPYP0000002349697.222296.5278
ENSG00000163319homo_sapiensENSP00000295491100100pan_troglodytesENSPTRP00000027890100100
ENSG00000163319homo_sapiensENSP0000029549184.50783.8028gorilla_gorillaENSGGOP0000000841098.360797.541
ENSG00000163319homo_sapiensENSP0000029549182.394472.5352sarcophilus_harrisiiENSSHAP0000000817681.818272.028
ENSG00000163319homo_sapiensENSP0000029549147.183140.1408dasypus_novemcinctusENSDNOP0000001770876.136464.7727
ENSG00000163319homo_sapiensENSP0000029549166.901461.9718erinaceus_europaeusENSEEUP0000000320765.972261.1111
ENSG00000163319homo_sapiensENSP0000029549159.859257.7465echinops_telfairiENSETEP0000000991460.714358.5714
ENSG00000163319homo_sapiensENSP0000029549182.394476.7606callithrix_jacchusENSCJAP0000007138973.12568.125
ENSG00000163319homo_sapiensENSP0000029549198.591696.4789cercocebus_atysENSCATP0000003569397.222295.1389
ENSG00000163319homo_sapiensENSP0000029549197.183195.0704macaca_fascicularisENSMFAP0000005278095.833393.75
ENSG00000163319homo_sapiensENSP0000029549197.183195.0704macaca_mulattaENSMMUP0000002013395.833393.75
ENSG00000163319homo_sapiensENSP0000029549197.183195.0704macaca_nemestrinaENSMNEP0000004169195.833393.75
ENSG00000163319homo_sapiensENSP0000029549178.873276.0563papio_anubisENSPANP0000004081395.726592.3077
ENSG00000163319homo_sapiensENSP0000029549197.183195.0704papio_anubisENSPANP0000004540895.833393.75
ENSG00000163319homo_sapiensENSP0000029549198.591696.4789mandrillus_leucophaeusENSMLEP0000002935397.222295.1389
ENSG00000163319homo_sapiensENSP0000029549190.845185.9155tursiops_truncatusENSTTRP0000000461690.209885.3147
ENSG00000163319homo_sapiensENSP0000029549190.140884.507vulpes_vulpesENSVVUP0000002131489.510583.9161
ENSG00000163319homo_sapiensENSP0000029549173.239465.493mus_spretusMGP_SPRETEiJ_P00719988071.5385
ENSG00000163319homo_sapiensENSP0000029549183.098675.3521equus_asinusENSEASP0000504650152.212447.3451
ENSG00000163319homo_sapiensENSP0000029549160.563454.2254capra_hircusENSCHIP0000001620181.904873.3333
ENSG00000163319homo_sapiensENSP0000029549182.394476.7606capra_hircusENSCHIP0000000204781.818276.2238
ENSG00000163319homo_sapiensENSP0000029549173.943765.493capra_hircusENSCHIP0000002001976.642367.8832
ENSG00000163319homo_sapiensENSP0000029549179.577573.2394capra_hircusENSCHIP0000002637391.12983.871
ENSG00000163319homo_sapiensENSP0000029549159.859252.1127capra_hircusENSCHIP0000002083480.188769.8113
ENSG00000163319homo_sapiensENSP0000029549192.253585.9155loxodonta_africanaENSLAFP0000000088990.972284.7222
ENSG00000163319homo_sapiensENSP0000029549189.436685.2113panthera_leoENSPLOP0000001367988.811284.6154
ENSG00000163319homo_sapiensENSP0000029549191.549387.3239ailuropoda_melanoleucaENSAMEP0000002651171.823268.5083
ENSG00000163319homo_sapiensENSP0000029549186.619778.8732bos_indicus_hybridENSBIXP0000503848686.01478.3217
ENSG00000163319homo_sapiensENSP0000029549189.436682.3944bos_indicus_hybridENSBIXP0000501524885.810879.0541
ENSG00000163319homo_sapiensENSP0000029549185.211378.169bos_indicus_hybridENSBIXP0000504437684.027877.0833
ENSG00000163319homo_sapiensENSP0000029549163.380357.7465bos_indicus_hybridENSBIXP0000501662986.538578.8462
ENSG00000163319homo_sapiensENSP0000029549169.014164.0845oryctolagus_cuniculusENSOCUP0000003043188.288381.982
ENSG00000163319homo_sapiensENSP0000029549191.549386.6197oryctolagus_cuniculusENSOCUP0000004667990.277885.4167
ENSG00000163319homo_sapiensENSP0000029549191.549388.0282equus_caballusENSECAP0000001782873.446370.6215
ENSG00000163319homo_sapiensENSP0000029549190.140884.507canis_lupus_familiarisENSCAFP0084502992089.510583.9161
ENSG00000163319homo_sapiensENSP0000029549189.436685.2113panthera_pardusENSPPRP0000001985188.811284.6154
ENSG00000163319homo_sapiensENSP0000029549190.140884.507marmota_marmota_marmotaENSMMMP0000000521689.510583.9161
ENSG00000163319homo_sapiensENSP0000029549192.253586.6197balaenoptera_musculusENSBMSP0001000345990.972285.4167
ENSG00000163319homo_sapiensENSP0000029549192.957784.507cavia_porcellusENSCPOP0000000825891.666783.3333
ENSG00000163319homo_sapiensENSP0000029549189.436684.507felis_catusENSFCAP0000004037288.811283.9161
ENSG00000163319homo_sapiensENSP0000029549192.253588.7324ursus_americanusENSUAMP0000001616091.608488.1119
ENSG00000163319homo_sapiensENSP0000029549180.985973.2394monodelphis_domesticaENSMODP0000005786872.32765.4088
ENSG00000163319homo_sapiensENSP0000029549186.619778.8732bison_bison_bisonENSBBBP0000001655086.01478.3217
ENSG00000163319homo_sapiensENSP0000029549189.436683.0986bison_bison_bisonENSBBBP0000002605288.811282.5175
ENSG00000163319homo_sapiensENSP0000029549173.239469.0141monodon_monocerosENSMMNP0001502770188.888983.7607
ENSG00000163319homo_sapiensENSP0000029549190.845185.9155monodon_monocerosENSMMNP0001502942490.209885.3147
ENSG00000163319homo_sapiensENSP0000029549190.845185.2113sus_scrofaENSSSCP0000004083990.209884.6154
ENSG00000163319homo_sapiensENSP0000029549171.83166.1972microcebus_murinusENSMICP0000002329487.179580.3419
ENSG00000163319homo_sapiensENSP0000029549190.140885.2113microcebus_murinusENSMICP0000002933788.888984.0278
ENSG00000163319homo_sapiensENSP0000029549191.549383.0986octodon_degusENSODEP0000001016389.041180.8219
ENSG00000163319homo_sapiensENSP0000029549191.549383.8028octodon_degusENSODEP0000002685990.277882.6389
ENSG00000163319homo_sapiensENSP0000029549158.450757.0423jaculus_jaculusENSJJAP0000002235785.56783.5052
ENSG00000163319homo_sapiensENSP0000029549190.140883.8028ovis_aries_rambouilletENSOARP0002001860689.510583.2168
ENSG00000163319homo_sapiensENSP0000029549192.253588.7324ursus_maritimusENSUMAP0000001179291.608488.1119
ENSG00000163319homo_sapiensENSP0000029549157.746554.2254ochotona_princepsENSOPRP0000000378358.571455
ENSG00000163319homo_sapiensENSP0000029549191.549386.6197delphinapterus_leucasENSDLEP0000002004190.909186.014
ENSG00000163319homo_sapiensENSP0000029549166.901463.3803delphinapterus_leucasENSDLEP0000002752488.78584.1122
ENSG00000163319homo_sapiensENSP0000029549192.957788.0282physeter_catodonENSPCTP0000501496291.666786.8056
ENSG00000163319homo_sapiensENSP0000029549187.323980.2817mus_caroliMGP_CAROLIEiJ_P006933786.713379.7203
ENSG00000163319homo_sapiensENSP0000029549187.323979.5775mus_musculusENSMUSP0000001697786.713379.021
ENSG00000163319homo_sapiensENSP0000029549187.323983.0986dipodomys_ordiiENSDORP0000001199087.323983.0986
ENSG00000163319homo_sapiensENSP0000029549164.788761.9718aotus_nancymaaeENSANAP0000003605682.142978.5714
ENSG00000163319homo_sapiensENSP0000029549191.549385.2113saimiri_boliviensis_boliviensisENSSBOP0000001073684.415678.5714
ENSG00000163319homo_sapiensENSP0000029549190.140883.0986vicugna_pacosENSVPAP0000001057789.510582.5175
ENSG00000163319homo_sapiensENSP0000029549190.140883.8028tupaia_belangeriENSTBEP0000001082888.888982.6389
ENSG00000163319homo_sapiensENSP0000029549190.140884.507phocoena_sinusENSPSNP0000000418389.510583.9161
ENSG00000163319homo_sapiensENSP0000029549173.239469.0141phocoena_sinusENSPSNP0000003023289.655284.4828
ENSG00000163319homo_sapiensENSP0000029549190.140883.8028camelus_dromedariusENSCDRP0000500627089.510583.2168
ENSG00000163319homo_sapiensENSP0000029549190.845186.6197carlito_syrichtaENSTSYP0000002303090.209886.014
ENSG00000163319homo_sapiensENSP0000029549188.732484.507panthera_tigris_altaicaENSPTIP0000002549888.111983.9161
ENSG00000163319homo_sapiensENSP0000029549183.802877.4648rattus_norvegicusENSRNOP0000008196269.590664.3275
ENSG00000163319homo_sapiensENSP0000029549192.957787.3239prolemur_simusENSPSMP0000002588991.666786.1111
ENSG00000163319homo_sapiensENSP0000029549185.211379.5775microtus_ochrogasterENSMOCP0000000970385.815680.1418
ENSG00000163319homo_sapiensENSP0000029549185.915580.9859microtus_ochrogasterENSMOCP0000001679386.524881.5603
ENSG00000163319homo_sapiensENSP0000029549188.028283.8028peromyscus_maniculatus_bairdiiENSPEMP0000000606086.206982.069
ENSG00000163319homo_sapiensENSP0000029549186.619778.8732bos_mutusENSBMUP0000001484186.01478.3217
ENSG00000163319homo_sapiensENSP0000029549189.436682.3944bos_mutusENSBMUP0000000543988.811281.8182
ENSG00000163319homo_sapiensENSP0000029549166.197259.1549mus_spicilegusENSMSIP0000002095069.629662.2222
ENSG00000163319homo_sapiensENSP0000029549171.83161.2676mus_spicilegusENSMSIP000000377127563.9706
ENSG00000163319homo_sapiensENSP0000029549188.028281.6901mus_spicilegusENSMSIP0000000195987.412681.1189
ENSG00000163319homo_sapiensENSP0000029549187.323983.8028cricetulus_griseus_chok1gshdENSCGRP0000100009087.943384.3972
ENSG00000163319homo_sapiensENSP0000029549159.154954.2254pteropus_vampyrusENSPVAP0000000608385.714378.5714
ENSG00000163319homo_sapiensENSP0000029549188.732479.5775myotis_lucifugusENSMLUP0000001555588.111979.021
ENSG00000163319homo_sapiensENSP0000029549154.929647.8873vombatus_ursinusENSVURP0001002132268.421159.6491
ENSG00000163319homo_sapiensENSP0000029549154.929647.8873vombatus_ursinusENSVURP0001002131468.421159.6491
ENSG00000163319homo_sapiensENSP0000029549178.873270.4225vombatus_ursinusENSVURP0001000842980.575571.9424
ENSG00000163319homo_sapiensENSP0000029549183.098676.7606rhinolophus_ferrumequinumENSRFEP0001001937782.517576.2238
ENSG00000163319homo_sapiensENSP0000029549188.732484.507rhinolophus_ferrumequinumENSRFEP0001000390188.111983.9161
ENSG00000163319homo_sapiensENSP0000029549186.619778.8732neovison_visonENSNVIP0000000503386.01478.3217
ENSG00000163319homo_sapiensENSP0000029549189.436682.3944bos_taurusENSBTAP0000002416188.811281.8182
ENSG00000163319homo_sapiensENSP0000029549163.380357.7465bos_taurusENSBTAP0000007206386.538578.8462
ENSG00000163319homo_sapiensENSP0000029549178.873271.831heterocephalus_glaber_femaleENSHGLP0000004139382.96375.5556
ENSG00000163319homo_sapiensENSP0000029549192.253583.0986heterocephalus_glaber_femaleENSHGLP0000004132463.902457.561
ENSG00000163319homo_sapiensENSP0000029549198.591696.4789rhinopithecus_bietiENSRBIP0000003612197.222295.1389
ENSG00000163319homo_sapiensENSP0000029549190.140883.8028canis_lupus_dingoENSCAFP0002001304189.510583.2168
ENSG00000163319homo_sapiensENSP0000029549182.394474.6479sciurus_vulgarisENSSVLP0000502212885.401577.3723
ENSG00000163319homo_sapiensENSP0000029549192.253586.6197sciurus_vulgarisENSSVLP0000502507291.608486.014
ENSG00000163319homo_sapiensENSP0000029549179.577572.5352phascolarctos_cinereusENSPCIP0000000637582.481875.1825
ENSG00000163319homo_sapiensENSP0000029549171.126859.1549phascolarctos_cinereusENSPCIP0000000018074.264761.7647
ENSG00000163319homo_sapiensENSP0000029549170.422562.6761phascolarctos_cinereusENSPCIP0000002630870.92263.1206
ENSG00000163319homo_sapiensENSP0000029549188.732481.6901procavia_capensisENSPCAP0000000463387.580.5556
ENSG00000163319homo_sapiensENSP0000029549185.211383.0986nannospalax_galiliENSNGAP0000001476086.428684.2857
ENSG00000163319homo_sapiensENSP0000029549189.436682.3944bos_grunniensENSBGRP0000003356488.811281.8182
ENSG00000163319homo_sapiensENSP0000029549192.957785.2113chinchilla_lanigeraENSCLAP0000002532391.666784.0278
ENSG00000163319homo_sapiensENSP0000029549192.253584.507chinchilla_lanigeraENSCLAP0000001189589.72682.1918
ENSG00000163319homo_sapiensENSP0000029549164.084558.4507cervus_hanglu_yarkandensisENSCHYP0000003787586.666779.0476
ENSG00000163319homo_sapiensENSP0000029549171.83164.7887cervus_hanglu_yarkandensisENSCHYP0000002860388.695780
ENSG00000163319homo_sapiensENSP0000029549174.647966.1972cervus_hanglu_yarkandensisENSCHYP0000001390575.177366.6667
ENSG00000163319homo_sapiensENSP0000029549189.436683.8028catagonus_wagneriENSCWAP0000001472088.194482.6389
ENSG00000163319homo_sapiensENSP0000029549190.845185.2113ictidomys_tridecemlineatusENSSTOP0000000714690.209884.6154
ENSG00000163319homo_sapiensENSP0000029549191.549385.2113urocitellus_parryiiENSUPAP0001000885590.909184.6154
ENSG00000163319homo_sapiensENSP0000029549185.211378.169moschus_moschiferusENSMMSP0000001720684.615477.6224
ENSG00000163319homo_sapiensENSP0000029549189.436684.507moschus_moschiferusENSMMSP0000003140388.811283.9161
ENSG00000163319homo_sapiensENSP0000029549190.845184.507moschus_moschiferusENSMMSP0000002431790.209883.9161
ENSG00000163319homo_sapiensENSP0000029549198.591696.4789rhinopithecus_roxellanaENSRROP0000004237597.222295.1389
ENSG00000163319homo_sapiensENSP0000029549188.028281.6901mus_pahariMGP_PahariEiJ_P003249387.412681.1189
ENSG00000163319homo_sapiensENSP0000029549190.845185.9155propithecus_coquereliENSPCOP0000001217189.583384.7222

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003735enables structural constituent of ribosome2IBA,NASHomo_sapiens(9606)Function
GO:0005743located_in mitochondrial inner membrane2NAS,TASHomo_sapiens(9606)Component
GO:0005763part_of mitochondrial small ribosomal subunit3IBA,IDA,NASHomo_sapiens(9606)Component
GO:0006412involved_in translation2IBA,NASHomo_sapiens(9606)Process
GO:0032543involved_in mitochondrial translation1NASHomo_sapiens(9606)Process
GO:0070181enables small ribosomal subunit rRNA binding1IBAHomo_sapiens(9606)Function

Expression