Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligase
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000162722 Gene ID 25893 Accession 24150
Symbol TRIM58 Alias BIA2 Full Name tripartite motif containing 58
Status Confidence Length 22952 bases Strand Plus strand
Position 1 : 247857187 - 247880138 RNA binding domain SPRY
Summary Predicted to enable dynein heavy chain binding activity; dynein intermediate chain binding activity; and ubiquitin protein ligase activity. Predicted to be involved in several processes, including positive regulation of erythrocyte enucleation; protein ubiquitination; and regulation of nuclear migration along microtubule. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000355437 SPRY PF00622 1.2e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TRIM58-201 ENST00000366481 5170 486aa ENSP00000355437

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
26594Antihypertensive Agents5.3640000E-005-
70936Erythrocyte Count1E-928017375
93802Erythrocyte Count5E-1023222517
94831Erythrocyte Count3E-1428017375
95436Platelet Count6E-922139419
102904Fatty Acids5E-1125500335
102905Oleic Acid5E-1125500335
106803Erythrocyte Count2E-820139978

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000209involved_in protein polyubiquitination1IBAHomo_sapiens(9606)Process
GO:0003674enables molecular_function1NDHomo_sapiens(9606)Function
GO:0005654is_active_in nucleoplasm1IBAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0005829is_active_in cytosol1IBAHomo_sapiens(9606)Component
GO:0006511involved_in ubiquitin-dependent protein catabolic process1IEAHomo_sapiens(9606)Process
GO:0008150involved_in biological_process1NDHomo_sapiens(9606)Process
GO:0008270enables zinc ion binding1IEAHomo_sapiens(9606)Function
GO:0010508involved_in positive regulation of autophagy1IBAHomo_sapiens(9606)Process
GO:0019901enables protein kinase binding1IBAHomo_sapiens(9606)Function
GO:0032880involved_in regulation of protein localization1IBAHomo_sapiens(9606)Process
GO:0042803enables protein homodimerization activity1IBAHomo_sapiens(9606)Function
GO:0043123involved_in positive regulation of I-kappaB kinase/NF-kappaB signaling1IBAHomo_sapiens(9606)Process
GO:0045087involved_in innate immune response1IBAHomo_sapiens(9606)Process
GO:0045504enables dynein heavy chain binding1IEAHomo_sapiens(9606)Function
GO:0045505enables dynein intermediate chain binding1IEAHomo_sapiens(9606)Function
GO:0046596involved_in regulation of viral entry into host cell1IBAHomo_sapiens(9606)Process
GO:0051092involved_in positive regulation of NF-kappaB transcription factor activity1IBAHomo_sapiens(9606)Process
GO:0051865involved_in protein autoubiquitination1IEAHomo_sapiens(9606)Process
GO:0061630enables ubiquitin protein ligase activity1IBAHomo_sapiens(9606)Function
GO:0061931involved_in positive regulation of erythrocyte enucleation1IEAHomo_sapiens(9606)Process
GO:1902838involved_in regulation of nuclear migration along microtubule1IEAHomo_sapiens(9606)Process

Expression