RBP Type
Canonical_RBPs
Diseases
Disease
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000162032 Gene ID
90864
Accession
30629
Symbol
SPSB3
Alias
SSB3;C16orf31
Full Name
splA/ryanodine receptor domain and SOCS box containing 3
Status
Confidence
Length
16989 bases
Strand
Minus strand
Position
16 : 1776712 - 1793700
RNA binding domain
SPRY
Summary
Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytosol. Predicted to be part of SCF ubiquitin ligase complex. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000301717
SPRY
PF00622
7.8e-18
1
ENSP00000457206
SPRY
PF00622
7.8e-18
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
SPSB3-208
ENST00000566339
1535
355aa
ENSP00000457206
SPSB3-206
ENST00000564709
2316
No protein
-
SPSB3-211
ENST00000569380
1781
No protein
-
SPSB3-209
ENST00000567868
1628
No protein
-
SPSB3-204
ENST00000563741
1746
No protein
-
SPSB3-201
ENST00000301717
1449
355aa
ENSP00000301717
SPSB3-202
ENST00000563668
1509
No protein
-
SPSB3-203
ENST00000563705
876
No protein
-
SPSB3-212
ENST00000569769
580
168aa
ENSP00000455098
SPSB3-207
ENST00000565550
898
No protein
-
SPSB3-205
ENST00000564070
714
No protein
-
SPSB3-210
ENST00000568416
520
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0016567 involved_in protein ubiquitination 1 IEA Homo_sapiens(9606) Process GO:0019005 part_of SCF ubiquitin ligase complex 1 IBA Homo_sapiens(9606) Component GO:0043161 involved_in proteasome-mediated ubiquitin-dependent protein catabolic process 1 IBA Homo_sapiens(9606) Process
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