RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase DUB
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000154370 Gene ID
81559
Accession
16281
Symbol
TRIM11
Alias
BIA1;RNF92
Full Name
tripartite motif containing 11
Status
Confidence
Length
13163 bases
Strand
Minus strand
Position
1 : 228393673 - 228406835
RNA binding domain
SPRY
Summary
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This protein localizes to the nucleus and the cytoplasm. Its function has not been identified. [provided by RefSeq, Jul 2008]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000473360
SPRY
PF00622
6.4e-13
1
ENSP00000284551
SPRY
PF00622
1.1e-12
1
ENSP00000473574
SPRY
PF00622
2.5e-11
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
TRIM11-204
ENST00000493030
5774
343aa
ENSP00000473360
TRIM11-201
ENST00000284551
2710
468aa
ENSP00000284551
TRIM11-206
ENST00000602582
682
228aa
ENSP00000473574
TRIM11-203
ENST00000475775
693
No protein
-
TRIM11-202
ENST00000366699
2511
385aa
ENSP00000355660
TRIM11-205
ENST00000602308
586
54aa
ENSP00000473579
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
92539 Hip 4E-6 25271088 92541 Stress, Psychological 4E-6 25271088
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0004842 enables ubiquitin-protein transferase activity 1 IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005654 located_in nucleoplasm 1 IDA Homo_sapiens(9606) Component GO:0005737 is_active_in cytoplasm 2 IBA,IDA Homo_sapiens(9606) Component GO:0005829 is_active_in cytosol 2 IBA,IDA Homo_sapiens(9606) Component GO:0008270 enables zinc ion binding 1 IEA Homo_sapiens(9606) Function GO:0010468 involved_in regulation of gene expression 1 IBA Homo_sapiens(9606) Process GO:0016567 involved_in protein ubiquitination 2 IBA,IDA Homo_sapiens(9606) Process GO:0019904 enables protein domain specific binding 1 IEA Homo_sapiens(9606) Function GO:0030674 enables protein-macromolecule adaptor activity 1 IDA Homo_sapiens(9606) Function GO:0032897 involved_in negative regulation of viral transcription 1 IDA Homo_sapiens(9606) Process GO:0044790 involved_in suppression of viral release by host 2 IDA,IMP Homo_sapiens(9606) Process GO:0045087 involved_in innate immune response 1 IMP Homo_sapiens(9606) Process GO:0045892 involved_in negative regulation of DNA-templated transcription 1 IEA Homo_sapiens(9606) Process GO:0046597 involved_in negative regulation of viral entry into host cell 1 IMP Homo_sapiens(9606) Process GO:0046598 involved_in positive regulation of viral entry into host cell 1 IMP Homo_sapiens(9606) Process GO:0050768 involved_in negative regulation of neurogenesis 1 IEA Homo_sapiens(9606) Process GO:0051865 involved_in protein autoubiquitination 1 IDA Homo_sapiens(9606) Process GO:0061630 enables ubiquitin protein ligase activity 1 IBA Homo_sapiens(9606) Function GO:0140972 involved_in negative regulation of AIM2 inflammasome complex assembly 1 IDA Homo_sapiens(9606) Process
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