Functions and Diseases

RBP Type Canonical_RBPs
Diseases Dengue
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000153767 Gene ID 2960 Accession 4650
Symbol GTF2E1 Alias FE;TF2E1;TFIIE-A Full Name general transcription factor IIE subunit 1
Status Confidence Length 40433 bases Strand Plus strand
Position 3 : 120742637 - 120783069 RNA binding domain TF_Zn_Ribbon
Summary Enables RNA polymerase II general transcription initiation factor activity. Involved in transcription by RNA polymerase II. Located in cytosol and nucleoplasm. Part of transcription factor TFIID complex and transcription preinitiation complex. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000283875 TF_Zn_Ribbon PF08271 6.4e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
GTF2E1-203 ENST00000484715 543 49aa ENSP00000417342
GTF2E1-202 ENST00000469772 503 129aa ENSP00000418808
GTF2E1-204 ENST00000492959 551 122aa ENSP00000417077
GTF2E1-201 ENST00000283875 3000 439aa ENSP00000283875
GTF2E1-205 ENST00000497393 567 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0001113involved_in transcription open complex formation at RNA polymerase II promoter1IBAHomo_sapiens(9606)Process
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IDAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0005669part_of transcription factor TFIID complex1IDAHomo_sapiens(9606)Component
GO:0005673part_of transcription factor TFIIE complex1IBAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1IDAHomo_sapiens(9606)Component
GO:0006366involved_in transcription by RNA polymerase II1IDAHomo_sapiens(9606)Process
GO:0006367involved_in transcription initiation at RNA polymerase II promoter1TASHomo_sapiens(9606)Process
GO:0016251enables RNA polymerase II general transcription initiation factor activity1IDAHomo_sapiens(9606)Function
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0060090enables molecular adaptor activity1EXPHomo_sapiens(9606)Function

Expression