RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Stress granucle
BulkPerturb-seq
Ensembl ID ENSG00000148308 Gene ID
9328
Accession
4668
Symbol
GTF3C5
Alias
TFIIIC63;TFiiiC2-63;TFIIICepsilon
Full Name
general transcription factor IIIC subunit 5
Status
Confidence
Length
27829 bases
Strand
Plus strand
Position
9 : 133030675 - 133058503
RNA binding domain
Tau95_N , Tau95
Summary
Predicted to contribute to DNA binding activity. Predicted to be involved in 5S class rRNA transcription by RNA polymerase III and tRNA transcription by RNA polymerase III. Predicted to act upstream of or within skeletal muscle cell differentiation. Located in nucleoplasm. Part of transcription factor TFIIIC complex. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000339530
Tau95_N
PF17682
1.1e-28
1
ENSP00000339530
Tau95
PF09734
9.6e-13
2
ENSP00000361169
Tau95_N
PF17682
1.5e-28
1
ENSP00000361169
Tau95
PF09734
8.7e-39
2
ENSP00000361180
Tau95_N
PF17682
1.5e-28
1
ENSP00000361180
Tau95
PF09734
8.8e-39
2
ENSP00000389498
Tau95_N
PF17682
1.3e-17
1
ENSP00000389498
Tau95
PF09734
2.1e-18
2
ENSP00000393207
Tau95
PF09734
1.9e-39
1
ENSP00000361171
Tau95
PF09734
5.5e-32
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
GTF3C5-203
ENST00000372099
1999
345aa
ENSP00000361171
GTF3C5-207
ENST00000440319
920
244aa
ENSP00000389498
GTF3C5-202
ENST00000372097
2098
519aa
ENSP00000361169
GTF3C5-204
ENST00000372108
2110
526aa
ENSP00000361180
GTF3C5-201
ENST00000342018
1905
457aa
ENSP00000339530
GTF3C5-206
ENST00000439697
823
224aa
ENSP00000393207
GTF3C5-209
ENST00000485692
827
No protein
-
GTF3C5-208
ENST00000461871
623
No protein
-
GTF3C5-205
ENST00000435745
736
90aa
ENSP00000397961
GTF3C5-210
ENST00000489842
696
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000127 part_of transcription factor TFIIIC complex 2 IBA,IDA Homo_sapiens(9606) Component GO:0000995 enables RNA polymerase III general transcription initiation factor activity 1 IDA Homo_sapiens(9606) Function GO:0001002 contributes_to RNA polymerase III type 1 promoter sequence-specific DNA binding 1 IBA Homo_sapiens(9606) Function GO:0001003 contributes_to RNA polymerase III type 2 promoter sequence-specific DNA binding 1 IBA Homo_sapiens(9606) Function GO:0003677 contributes_to DNA binding 1 IC Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005654 located_in nucleoplasm 2 IDA,TAS Homo_sapiens(9606) Component GO:0006383 involved_in transcription by RNA polymerase III 1 IC Homo_sapiens(9606) Process GO:0006384 involved_in transcription initiation at RNA polymerase III promoter 1 IEA Homo_sapiens(9606) Process GO:0035914 involved_in skeletal muscle cell differentiation 1 IEA Homo_sapiens(9606) Process GO:0042791 involved_in 5S class rRNA transcription by RNA polymerase III 1 IC Homo_sapiens(9606) Process GO:0042797 involved_in tRNA transcription by RNA polymerase III 1 IC Homo_sapiens(9606) Process
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