Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions TF
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000147596 Gene ID 63978 Accession 14001
Symbol PRDM14 Alias PFM11 Full Name PR/SET domain 14
Status Confidence Length 20043 bases Strand Minus strand
Position 8 : 70051651 - 70071693 RNA binding domain N.A.
Summary This gene encodes a member of the PRDI-BF1 and RIZ homology domain containing (PRDM) family of transcriptional regulators. The encoded protein may possess histone methyltransferase activity and plays a critical role in cell pluripotency by suppressing the expression of differentiation marker genes. Expression of this gene may play a role in breast cancer. [provided by RefSeq, Dec 2011]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal
28423353 Silencing PRDM14 expression by an innovative RNAi therapy inhibits stemness, tumorigenicity, and metastasis of breast cancer. Hiroaki Taniguchi 2017-07-18 Oncotarget

Transcripts

Name Transcript ID bp Protein Translation ID
PRDM14-201 ENST00000276594 2269 571aa ENSP00000276594
PRDM14-202 ENST00000426346 422 99aa ENSP00000408653

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
76695Testicular Neoplasms5E-823666240

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000122involved_in negative regulation of transcription by RNA polymerase II1IEAHomo_sapiens(9606)Process
GO:0000902involved_in cell morphogenesis1IEAHomo_sapiens(9606)Process
GO:0000977enables RNA polymerase II transcription regulatory region sequence-specific DNA binding1IBAHomo_sapiens(9606)Function
GO:0001708involved_in cell fate specification1IEAHomo_sapiens(9606)Process
GO:0001827involved_in inner cell mass cell fate commitment1IEAHomo_sapiens(9606)Process
GO:0003723enables RNA binding1IEAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005654located_in nucleoplasm2IDA,TASHomo_sapiens(9606)Component
GO:0006357involved_in regulation of transcription by RNA polymerase II1IBAHomo_sapiens(9606)Process
GO:0007281involved_in germ cell development1IEAHomo_sapiens(9606)Process
GO:0007566involved_in embryo implantation1IEAHomo_sapiens(9606)Process
GO:0008168enables methyltransferase activity1IEAHomo_sapiens(9606)Function
GO:0008543involved_in fibroblast growth factor receptor signaling pathway1IEAHomo_sapiens(9606)Process
GO:0009566involved_in fertilization1IEAHomo_sapiens(9606)Process
GO:0030718involved_in germ-line stem cell population maintenance1IEAHomo_sapiens(9606)Process
GO:0031490enables chromatin DNA binding1IEAHomo_sapiens(9606)Function
GO:0034972involved_in histone H3-R26 methylation1IBAHomo_sapiens(9606)Process
GO:0040037involved_in negative regulation of fibroblast growth factor receptor signaling pathway1IEAHomo_sapiens(9606)Process
GO:0044030involved_in regulation of DNA methylation1IEAHomo_sapiens(9606)Process
GO:0046872enables metal ion binding1IEAHomo_sapiens(9606)Function
GO:0048873involved_in homeostasis of number of cells within a tissue1IEAHomo_sapiens(9606)Process
GO:0060817involved_in inactivation of paternal X chromosome1IEAHomo_sapiens(9606)Process
GO:1902093involved_in positive regulation of flagellated sperm motility1IEAHomo_sapiens(9606)Process
GO:1902459involved_in positive regulation of stem cell population maintenance1IEAHomo_sapiens(9606)Process

Expression