RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Functions and Diseases

RBP Type	Non-canonical_RBPs
Diseases	N.A.
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	Transmemebrane
Localizations	N.A.
BulkPerturb-seq

Description

Ensembl ID	ENSG00000147231	Gene ID	55086	Accession	25486
Symbol	RADX	Alias	CXorf57	Full Name	RPA1 related single stranded DNA binding protein, X-linked
Status	Confidence	Length	67510 bases	Strand	Plus strand
Position	X : 106611930 - 106679439	RNA binding domain	N.A.
Summary	Enables single-stranded DNA binding activity. Involved in negative regulation of double-strand break repair via homologous recombination. Located in nuclear speck and replication fork. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RADX-202	ENST00000372548	3852	855aa	ENSP00000361628
RADX-204	ENST00000461251	2299	567aa	ENSP00000432238
RADX-203	ENST00000421550	2880	566aa	ENSP00000405866
RADX-205	ENST00000478395	425	No protein	-
RADX-206	ENST00000497124	682	No protein	-
RADX-201	ENST00000372544	3607	758aa	ENSP00000361623

Gene Model

Click here to download ENSG00000147231's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000147231's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003697	enables single-stranded DNA binding	2	IBA,IDA	Homo_sapiens(9606)	Function
GO:0003723	enables RNA binding	1	HDA	Homo_sapiens(9606)	Function
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005657	is_active_in replication fork	2	IBA,IDA	Homo_sapiens(9606)	Component
GO:0006282	involved_in regulation of DNA repair	1	IBA	Homo_sapiens(9606)	Process
GO:0016607	located_in nuclear speck	1	IDA	Homo_sapiens(9606)	Component
GO:2000042	involved_in negative regulation of double-strand break repair via homologous recombination	1	IDA	Homo_sapiens(9606)	Process

Expression