Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases SARS-COV-2Dengue
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions Metabolic enzyme
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000147155 Gene ID 10682 Accession 3133
Symbol EBP Alias CPX;CHO2;CPXD;MEND;CDPX2 Full Name EBP cholestenol delta-isomerase
Status Confidence Length 6909 bases Strand Plus strand
Position X : 48521808 - 48528716 RNA binding domain N.A.
Summary The protein encoded by this gene is an integral membrane protein of the endoplasmic reticulum. It is a high affinity binding protein for the antiischemic phenylalkylamine Ca2+ antagonist [3H]emopamil and the photoaffinity label [3H]azidopamil. It is similar to sigma receptors and may be a member of a superfamily of high affinity drug-binding proteins in the endoplasmic reticulum of different tissues. This protein shares structural features with bacterial and eukaryontic drug transporting proteins. It has four putative transmembrane segments and contains two conserved glutamate residues which may be involved in the transport of cationic amphiphilics. Another prominent feature of this protein is its high content of aromatic amino acid residues (>23%) in its transmembrane segments. These aromatic amino acid residues have been suggested to be involved in the drug transport by the P-glycoprotein. Mutations in this gene cause Chondrodysplasia punctata 2 (CDPX2; also known as Conradi-Hunermann syndrome). [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EBP-201 ENST00000276096 904 No protein -
EBP-206 ENST00000498425 796 No protein -
EBP-205 ENST00000495186 1125 230aa ENSP00000417052
EBP-203 ENST00000446158 714 160aa ENSP00000390031
EBP-202 ENST00000414061 609 145aa ENSP00000405832
EBP-204 ENST00000466461 694 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000247enables C-8 sterol isomerase activity2IBA,ISSHomo_sapiens(9606)Function
GO:0004769enables steroid delta-isomerase activity4EXP,IBA,IDA,IMPHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005635located_in nuclear envelope1IDAHomo_sapiens(9606)Component
GO:0005783is_active_in endoplasmic reticulum2IBA,IDAHomo_sapiens(9606)Component
GO:0005789located_in endoplasmic reticulum membrane2ISM,TASHomo_sapiens(9606)Component
GO:0006695involved_in cholesterol biosynthetic process2IBA,IDAHomo_sapiens(9606)Process
GO:0008203involved_in cholesterol metabolic process1IMPHomo_sapiens(9606)Process
GO:0030097involved_in hemopoiesis1IEAHomo_sapiens(9606)Process
GO:0031410located_in cytoplasmic vesicle1IEAHomo_sapiens(9606)Component
GO:0031965located_in nuclear membrane1IDAHomo_sapiens(9606)Component
GO:0033489involved_in cholesterol biosynthetic process via desmosterol1TASHomo_sapiens(9606)Process
GO:0033490involved_in cholesterol biosynthetic process via lathosterol1TASHomo_sapiens(9606)Process
GO:0042802enables identical protein binding1IPIHomo_sapiens(9606)Function
GO:0043931involved_in ossification involved in bone maturation1IMPHomo_sapiens(9606)Process
GO:0047750enables cholestenol delta-isomerase activity1IEAHomo_sapiens(9606)Function

Expression