Functions and Diseases

RBP Type Canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs N.A.
Moonlighting functions E3 ligaseTF
Localizations N.A.
BulkPerturb-seq

Description

Ensembl ID ENSG00000144747 Gene ID 7110 Accession 11870
Symbol TMF1 Alias TMF;ARA160 Full Name TATA element modulatory factor 1
Status Confidence Length 32513 bases Strand Minus strand
Position 3 : 69019827 - 69052339 RNA binding domain TMF_TATA_bd , TMF_DNA_bd
Summary Enables androgen receptor binding activity and nuclear receptor coactivator activity. Involved in androgen receptor signaling pathway and positive regulation of transcription by RNA polymerase II. Located in Golgi apparatus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSP00000419330 TMF_DNA_bd PF12329 3.2e-21 1
ENSP00000381567 TMF_DNA_bd PF12329 5e-21 1
ENSP00000381567 TMF_TATA_bd PF12325 3.5e-31 2
ENSP00000494067 TMF_DNA_bd PF12329 5e-21 1
ENSP00000494067 TMF_TATA_bd PF12325 3.5e-31 2
ENSP00000496378 TMF_DNA_bd PF12329 1.1e-19 1
ENSP00000496378 TMF_TATA_bd PF12325 3e-31 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TMF1-201 ENST00000398559 6879 1093aa ENSP00000381567
TMF1-206 ENST00000646304 6546 985aa ENSP00000496378
TMF1-207 ENST00000646708 4867 1096aa ENSP00000494067
TMF1-203 ENST00000488010 3399 775aa ENSP00000419330
TMF1-204 ENST00000489370 372 No protein -
TMF1-205 ENST00000645406 1215 No protein -
TMF1-202 ENST00000477872 222 No protein -

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000139located_in Golgi membrane1IEAHomo_sapiens(9606)Component
GO:0001675involved_in acrosome assembly1IEAHomo_sapiens(9606)Process
GO:0001819involved_in positive regulation of cytokine production1IEAHomo_sapiens(9606)Process
GO:0003677enables DNA binding1IEAHomo_sapiens(9606)Function
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634located_in nucleus1IEAHomo_sapiens(9606)Component
GO:0005783is_active_in endoplasmic reticulum1IBAHomo_sapiens(9606)Component
GO:0005794is_active_in Golgi apparatus2IBA,IDAHomo_sapiens(9606)Component
GO:0005829located_in cytosol1TASHomo_sapiens(9606)Component
GO:0007289involved_in spermatid nucleus differentiation1IEAHomo_sapiens(9606)Process
GO:0010629involved_in negative regulation of gene expression1IEAHomo_sapiens(9606)Process
GO:0030317involved_in flagellated sperm motility1IEAHomo_sapiens(9606)Process
GO:0030374enables nuclear receptor coactivator activity1IDAHomo_sapiens(9606)Function
GO:0030521involved_in androgen receptor signaling pathway1IDAHomo_sapiens(9606)Process
GO:0032275involved_in luteinizing hormone secretion1IEAHomo_sapiens(9606)Process
GO:0033327involved_in Leydig cell differentiation1IEAHomo_sapiens(9606)Process
GO:0042742involved_in defense response to bacterium1IEAHomo_sapiens(9606)Process
GO:0045944involved_in positive regulation of transcription by RNA polymerase II1IDAHomo_sapiens(9606)Process
GO:0050681enables nuclear androgen receptor binding1IPIHomo_sapiens(9606)Function
GO:0061136involved_in regulation of proteasomal protein catabolic process1ISSHomo_sapiens(9606)Process
GO:1904019involved_in epithelial cell apoptotic process1IEAHomo_sapiens(9606)Process
GO:1904036involved_in negative regulation of epithelial cell apoptotic process1IEAHomo_sapiens(9606)Process
GO:2000845involved_in positive regulation of testosterone secretion1IEAHomo_sapiens(9606)Process

Expression