RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase TF
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000144747 Gene ID
7110
Accession
11870
Symbol
TMF1
Alias
TMF;ARA160
Full Name
TATA element modulatory factor 1
Status
Confidence
Length
32513 bases
Strand
Minus strand
Position
3 : 69019827 - 69052339
RNA binding domain
TMF_TATA_bd , TMF_DNA_bd
Summary
Enables androgen receptor binding activity and nuclear receptor coactivator activity. Involved in androgen receptor signaling pathway and positive regulation of transcription by RNA polymerase II. Located in Golgi apparatus. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000419330
TMF_DNA_bd
PF12329
3.2e-21
1
ENSP00000381567
TMF_DNA_bd
PF12329
5e-21
1
ENSP00000381567
TMF_TATA_bd
PF12325
3.5e-31
2
ENSP00000494067
TMF_DNA_bd
PF12329
5e-21
1
ENSP00000494067
TMF_TATA_bd
PF12325
3.5e-31
2
ENSP00000496378
TMF_DNA_bd
PF12329
1.1e-19
1
ENSP00000496378
TMF_TATA_bd
PF12325
3e-31
2
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
TMF1-201
ENST00000398559
6879
1093aa
ENSP00000381567
TMF1-206
ENST00000646304
6546
985aa
ENSP00000496378
TMF1-207
ENST00000646708
4867
1096aa
ENSP00000494067
TMF1-203
ENST00000488010
3399
775aa
ENSP00000419330
TMF1-204
ENST00000489370
372
No protein
-
TMF1-205
ENST00000645406
1215
No protein
-
TMF1-202
ENST00000477872
222
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000139 located_in Golgi membrane 1 IEA Homo_sapiens(9606) Component GO:0001675 involved_in acrosome assembly 1 IEA Homo_sapiens(9606) Process GO:0001819 involved_in positive regulation of cytokine production 1 IEA Homo_sapiens(9606) Process GO:0003677 enables DNA binding 1 IEA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005634 located_in nucleus 1 IEA Homo_sapiens(9606) Component GO:0005783 is_active_in endoplasmic reticulum 1 IBA Homo_sapiens(9606) Component GO:0005794 is_active_in Golgi apparatus 2 IBA,IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 TAS Homo_sapiens(9606) Component GO:0007289 involved_in spermatid nucleus differentiation 1 IEA Homo_sapiens(9606) Process GO:0010629 involved_in negative regulation of gene expression 1 IEA Homo_sapiens(9606) Process GO:0030317 involved_in flagellated sperm motility 1 IEA Homo_sapiens(9606) Process GO:0030374 enables nuclear receptor coactivator activity 1 IDA Homo_sapiens(9606) Function GO:0030521 involved_in androgen receptor signaling pathway 1 IDA Homo_sapiens(9606) Process GO:0032275 involved_in luteinizing hormone secretion 1 IEA Homo_sapiens(9606) Process GO:0033327 involved_in Leydig cell differentiation 1 IEA Homo_sapiens(9606) Process GO:0042742 involved_in defense response to bacterium 1 IEA Homo_sapiens(9606) Process GO:0045944 involved_in positive regulation of transcription by RNA polymerase II 1 IDA Homo_sapiens(9606) Process GO:0050681 enables nuclear androgen receptor binding 1 IPI Homo_sapiens(9606) Function GO:0061136 involved_in regulation of proteasomal protein catabolic process 1 ISS Homo_sapiens(9606) Process GO:1904019 involved_in epithelial cell apoptotic process 1 IEA Homo_sapiens(9606) Process GO:1904036 involved_in negative regulation of epithelial cell apoptotic process 1 IEA Homo_sapiens(9606) Process GO:2000845 involved_in positive regulation of testosterone secretion 1 IEA Homo_sapiens(9606) Process
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