RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
E3 ligase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000144015 Gene ID
129868
Accession
19015
Symbol
TRIM43
Alias
TRIM43A
Full Name
tripartite motif containing 43
Status
Confidence
Length
7778 bases
Strand
Plus strand
Position
2 : 95592001 - 95599778
RNA binding domain
SPRY
Summary
Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in innate immune response; protein ubiquitination; and regulation of gene expression. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000272395
SPRY
PF00622
2.1e-07
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
TRIM43-201
ENST00000272395
1699
446aa
ENSP00000272395
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005737 is_active_in cytoplasm 1 IBA Homo_sapiens(9606) Component GO:0005815 located_in microtubule organizing center 1 IEA Homo_sapiens(9606) Component GO:0008270 enables zinc ion binding 1 IEA Homo_sapiens(9606) Function GO:0010468 involved_in regulation of gene expression 1 IBA Homo_sapiens(9606) Process GO:0016567 involved_in protein ubiquitination 1 IBA Homo_sapiens(9606) Process GO:0045087 involved_in innate immune response 1 IBA Homo_sapiens(9606) Process GO:0061630 enables ubiquitin protein ligase activity 1 IBA Homo_sapiens(9606) Function
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