Home
Welcome to
RBP
World!
Species
Families
Diseases
Cancers
Genetic diseases
RNA virus diseases
SARS-CoV-2 virus
Dengue virus
Zika virus
CHIKV virus
HIV virus
IAV virus
RV virus
SINV virus
VEEV virus
Flaviviruses virus
Cov-OC43 virus
Drugs
Functions
Downstream networks
RNA partners
tRNA
mRNA
snoRNA
rRNA
ncRNA
snRNA
Diverse
Moonlighting functions
RNA-binding metabolic enzymes
RNA-binding E3 ligases
RNA-binding DUBs
RNA-binding kinases
DRBPs
Transmemebrane RBPs
Condensates
P-body
Stress granule
Nucleolus
Fibrillar center
Nucleoli
Nucleoli rim
RNA Interactomes
U1
U2
U3
5S
NORAD
RMRP
Tools
RBPredictor
Blast
Datasets
Download
Human
Mouse
Fly
Worm
Arabidopsis
Rice
Contact
Help
Eu
RBP
DB
Eu
RBP
DB2 File List
Functions and Diseases
RBP Type
Canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
rRNA
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
N.A.
Description
Ensembl ID
ENSG00000143436
Gene ID
65005
Accession
14277
Symbol
MRPL9
Alias
L9mt;bL9m
Full Name
mitochondrial ribosomal protein L9
Status
Confidence
Length
3850 bases
Strand
Minus strand
Position
1 : 151759647 - 151763496
RNA binding domain
Ribosomal_L9_N
Summary
This is a nuclear gene encoding a protein component of the 39S subunit of the mitochondrial ribosome. Alternative splicing results in multiple transcript variants. A pseudogene of this gene is found on chromosome 8. [provided by RefSeq, Jul 2014]
RNA binding domains (RBDs)
Search:
Protein
Domain
Pfam ID
E-value
Domain number
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000357822
Ribosomal_L9_N
PF01281
5e-16
1
ENSP00000357823
Ribosomal_L9_N
PF01281
5e-16
1
ENSP00000491506
Ribosomal_L9_N
PF01281
8.2e-17
1
ENSP00000491640
Ribosomal_L9_N
PF01281
2.2e-16
1
ENSP00000492707
Ribosomal_L9_N
PF01281
1e-16
1
Showing 1 to 5 of 5 entries
RNA binding proteomes (RBPomes)
Show
10
20
50
entries
Search:
Pubmed ID
Full Name
Cell
Author
Time
Doi
22658674
RIC_PMID22658674_Hela_human
Hela
Alfredo Castello
2012 Jun 8
doi: 10.1016/j.cell.2012.04.031.?Epub 2012 May 31
22681889
RIC_PMID22681889_Hs_HEK293
HEK293
Alexander G Baltz
2012 Jun 8
doi: 10.1016/j.molcel.2012.05.021
25173706
Pclap_PMID25173706_Hs_HEK293
HEK293
Katharina Kramer
2014 Oct;11
doi: 10.1038/nmeth.3092.?Epub 2014 Aug 31
29431736
RICK_PMID29431736_Hela_human
Hela
Xichen Bao
2018 Mar
doi: 10.1038/nmeth.4595.?Epub 2018 Feb 12
30352994
eRIC_PMID30352994_Jurkat_human
Jurkat
Joel I Perez-Perri?
2018 Oct 23
doi: 10.1038/s41467-018-06557-8
30528433
XRNAX_PMID30528433_Hs_HEK293
HEK293
Jakob Trendel
2019 Jan 10
doi: 10.1016/j.cell.2018.11.004.?Epub 2018 Dec 6
30528433
XRNAX_PMID30528433_Hs_HeLa
HeLa
Jakob Trendel
2019 Jan 10
doi: 10.1016/j.cell.2018.11.004.?Epub 2018 Dec 6
30528433
XRNAX_PMID30528433_Hs_MCF7
MCF7
Jakob Trendel
2019 Jan 10
doi: 10.1016/j.cell.2018.11.004.?Epub 2018 Dec 6
30824702
PtexRIC_PMID30824702_293T_human
293T
Erika C Urdaneta
2019 Mar 1
doi: 10.1038/s41467-019-08942-3
32313943
eRIC_PMID32313943_eRIC_human
Michael Backlund
2020 May 21
doi: 10.1093/nar/gkaa256
Showing 1 to 10 of 14 entries
Previous
1
2
Next
Literatures on RNA binding capacity
Show
10
20
50
entries
Search:
Pubmed ID
Title
Author
Time
Journal
22660319
The let-7-Imp axis regulates ageing of the Drosophila testis stem-cell niche.
Hila Toledano
2012-05-23
Nature
Showing 1 to 1 of 1 entries
Previous
1
Next
Transcripts
Show
10
20
50
entries
Search:
Name
Transcript ID
bp
Protein
Translation ID
MRPL9-201
ENST00000368829
882
233aa
ENSP00000357822
MRPL9-202
ENST00000368830
1224
267aa
ENSP00000357823
MRPL9-203
ENST00000461182
348
No protein
-
MRPL9-204
ENST00000462783
693
No protein
-
MRPL9-205
ENST00000467306
1264
122aa
ENSP00000492374
MRPL9-206
ENST00000468006
531
No protein
-
MRPL9-207
ENST00000478926
581
153aa
ENSP00000492707
MRPL9-208
ENST00000481777
390
130aa
ENSP00000491640
MRPL9-209
ENST00000486707
503
77aa
ENSP00000491449
MRPL9-210
ENST00000492684
364
87aa
ENSP00000491506
Showing 1 to 10 of 11 entries
Previous
1
2
Next
Gene Model
Click here to download ENSG00000143436's gene model file
Pathways
Show
10
20
50
entries
Search:
Pathway ID
Pathway Name
Source
Showing 1 to 1 of 1 entries
Previous
1
Next
Phenotypes
Show
10
20
50
entries
Search:
ensgID
Trait
pValue
Pubmed ID
No data available in table
Showing 0 to 0 of 0 entries
Previous
Next
GWAS
Show
10
20
50
entries
Search:
ensgID
SNP
Chromosome
Position
Trait
PubmedID
Or or BEAT
EFO ID
No data available in table
Showing 0 to 0 of 0 entries
Previous
Next
Protein-Protein Interaction (PPI)
Click here to download ENSG00000143436's PPI file
Paralogs
Show
10
20
50
entries
Search:
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000143436
Showing 1 to 1 of 1 entries
Previous
1
Next
Orthologs
Show
10
20
50
entries
Search:
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000143436
homo_sapiens
ENSP00000357823
98.5019
97.7528
nomascus_leucogenys
ENSNLEP00000012521
98.5019
97.7528
ENSG00000143436
homo_sapiens
ENSP00000357823
99.6255
99.6255
pan_paniscus
ENSPPAP00000003842
99.6255
99.6255
ENSG00000143436
homo_sapiens
ENSP00000357823
100
99.2509
pongo_abelii
ENSPPYP00000001001
100
99.2509
ENSG00000143436
homo_sapiens
ENSP00000357823
99.6255
99.6255
pan_troglodytes
ENSPTRP00000002210
99.6255
99.6255
ENSG00000143436
homo_sapiens
ENSP00000357823
99.6255
99.6255
gorilla_gorilla
ENSGGOP00000001870
99.6255
99.6255
ENSG00000143436
homo_sapiens
ENSP00000357823
71.9101
65.9176
ornithorhynchus_anatinus
ENSOANP00000053835
69.3141
63.5379
ENSG00000143436
homo_sapiens
ENSP00000357823
76.03
69.2884
sarcophilus_harrisii
ENSSHAP00000044447
82.8571
75.5102
ENSG00000143436
homo_sapiens
ENSP00000357823
77.5281
68.9139
notamacropus_eugenii
ENSMEUP00000005584
80.8594
71.875
ENSG00000143436
homo_sapiens
ENSP00000357823
68.1648
65.5431
choloepus_hoffmanni
ENSCHOP00000000225
83.4862
80.2752
ENSG00000143436
homo_sapiens
ENSP00000357823
48.6891
46.4419
choloepus_hoffmanni
ENSCHOP00000006341
81.761
77.9874
Showing 1 to 10 of 193 entries
Previous
1
2
3
4
5
…
20
Next
Gene Ontology
Show
10
20
50
entries
Search:
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005739
is_active_in mitochondrion
2
IBA,IDA
Homo_sapiens(9606)
Component
GO:0005743
located_in mitochondrial inner membrane
2
NAS,TAS
Homo_sapiens(9606)
Component
GO:0005762
part_of mitochondrial large ribosomal subunit
2
IDA,NAS
Homo_sapiens(9606)
Component
GO:0003723
enables RNA binding
1
HDA
Homo_sapiens(9606)
Function
GO:0003735
enables structural constituent of ribosome
1
NAS
Homo_sapiens(9606)
Function
GO:0005515
enables protein binding
1
IPI
Homo_sapiens(9606)
Function
GO:0005761
located_in mitochondrial ribosome
1
NAS
Homo_sapiens(9606)
Component
GO:0006412
involved_in translation
1
NAS
Homo_sapiens(9606)
Process
GO:0032543
involved_in mitochondrial translation
1
NAS
Homo_sapiens(9606)
Process
Showing 1 to 9 of 9 entries
Previous
1
Next
Expression
−1
0
1
2
3
4
TPM
plotly-logomark
Contents
Description
RBDs
RBPomes
Literatures
Transcripts
Gene Model
PPI
Orthologs
Gene Ontology
Expression