| RBP Type |
Non-canonical_RBPs |
| Diseases |
N.A. |
| Drug |
N.A. |
| Main interacting RNAs |
N.A. |
| Moonlighting functions |
N.A. |
| Localizations |
Nucleoli |
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSG00000140264 | Gene ID |
10169 |
Accession |
10757 |
| Symbol |
SERF2 |
Alias |
FAM2C;4F5REL;H4F5REL;HsT17089 |
Full Name |
small EDRK-rich factor 2 |
| Status |
Confidence |
Length |
27328 bases |
Strand |
Plus strand |
| Position |
15 : 43777100 - 43804427 |
RNA binding domain |
N.A. |
| Summary |
Involved in protein destabilization. Predicted to be located in cytosol and nucleus. [provided by Alliance of Genome Resources, Apr 2022] |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| 30291272 |
Structural insights into pro-aggregation effects of C. elegans CRAM-1 and its human ortholog SERF2. |
Meenakshisundaram Balasubramaniam |
2018-10-05 |
Scientific reports |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| SERF2-214 |
ENST00000474290 |
548 |
No protein |
- |
| SERF2-203 |
ENST00000381359 |
1931 |
59aa |
ENSP00000370764 |
| SERF2-217 |
ENST00000630046 |
862 |
108aa |
ENSP00000486542 |
| SERF2-201 |
ENST00000249786 |
2543 |
59aa |
ENSP00000249786 |
| SERF2-216 |
ENST00000486144 |
1030 |
No protein |
- |
| SERF2-210 |
ENST00000409960 |
1032 |
170aa |
ENSP00000387187 |
| SERF2-209 |
ENST00000409646 |
559 |
83aa |
ENSP00000386316 |
| SERF2-212 |
ENST00000445816 |
2099 |
59aa |
ENSP00000400178 |
| SERF2-202 |
ENST00000339624 |
506 |
133aa |
ENSP00000339647 |
| SERF2-206 |
ENST00000409291 |
807 |
42aa |
ENSP00000387041 |
| SERF2-208 |
ENST00000409617 |
3254 |
40aa |
ENSP00000386290 |
| SERF2-213 |
ENST00000448830 |
4630 |
108aa |
ENSP00000391027 |
| SERF2-215 |
ENST00000475927 |
692 |
No protein |
- |
| SERF2-204 |
ENST00000402131 |
586 |
45aa |
ENSP00000386044 |
| SERF2-205 |
ENST00000403425 |
690 |
45aa |
ENSP00000384300 |
| SERF2-211 |
ENST00000430901 |
483 |
71aa |
ENSP00000394660 |
| SERF2-207 |
ENST00000409614 |
582 |
45aa |
ENSP00000386783 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
| GO:0003674 | enables molecular_function | 1 | ND | Homo_sapiens(9606) | Function |
| GO:0005634 | located_in nucleus | 1 | ISS | Homo_sapiens(9606) | Component |
| GO:0005829 | located_in cytosol | 1 | ISS | Homo_sapiens(9606) | Component |
| GO:0031648 | involved_in protein destabilization | 1 | IMP | Homo_sapiens(9606) | Process |
