RBP Type
Non-canonical_RBPs
Diseases
Disease
Drug
Drug
Main interacting RNAs
N.A.
Moonlighting functions
Kinase
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000137948 Gene ID
676
Accession
1105
Symbol
BRDT
Alias
CT9;BRD6;SPGF21
Full Name
bromodomain testis associated
Status
Confidence
Length
65084 bases
Strand
Plus strand
Position
1 : 91949343 - 92014426
RNA binding domain
N.A.
Summary
BRDT is similar to the RING3 protein family. It possesses 2 bromodomain motifs and a PEST sequence (a cluster of proline, glutamic acid, serine, and threonine residues), characteristic of proteins that undergo rapid intracellular degradation. The bromodomain is found in proteins that regulate transcription. Several transcript variants encoding multiple isoforms have been found for this gene. [provided by RefSeq, Jun 2011]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
30558232
Targeting the Oncoprotein Smoothened by Small Molecules: Focus on Novel Acylguanidine Derivatives as Potent Smoothened Inhibitors.
Silvia Pietrobono
2018-12-14
Cells
33469999
Genome-wide chromatin occupancy of BRDT and gene expression analysis suggest transcriptional partners and specific epigenetic landscapes that regulate gene expression during spermatogenesis.
Ra Yoon Her
2021-02-01
Molecular reproduction and development
Name
Transcript ID
bp
Protein
Translation ID
BRDT-211
ENST00000448194
1482
238aa
ENSP00000410587
BRDT-216
ENST00000470955
998
71aa
ENSP00000506247
BRDT-202
ENST00000362005
3409
947aa
ENSP00000354568
BRDT-203
ENST00000370389
3696
874aa
ENSP00000359416
BRDT-204
ENST00000394530
3207
901aa
ENSP00000378038
BRDT-207
ENST00000423434
760
176aa
ENSP00000396351
BRDT-210
ENST00000440509
788
200aa
ENSP00000416714
BRDT-208
ENST00000426141
1530
462aa
ENSP00000404969
BRDT-215
ENST00000461218
567
No protein
-
BRDT-217
ENST00000476711
579
No protein
-
BRDT-212
ENST00000449584
550
52aa
ENSP00000408625
BRDT-209
ENST00000427104
1363
155aa
ENSP00000400002
BRDT-201
ENST00000355011
534
14aa
ENSP00000400199
BRDT-205
ENST00000399546
3310
947aa
ENSP00000387822
BRDT-219
ENST00000484833
585
No protein
-
BRDT-213
ENST00000450792
559
96aa
ENSP00000414349
BRDT-220
ENST00000548992
569
100aa
ENSP00000447394
BRDT-221
ENST00000552654
578
63aa
ENSP00000446599
BRDT-214
ENST00000457265
551
31aa
ENSP00000408138
BRDT-206
ENST00000402388
3125
947aa
ENSP00000384051
BRDT-224
ENST00000680541
1153
345aa
ENSP00000505035
BRDT-222
ENST00000680091
1563
475aa
ENSP00000506227
BRDT-218
ENST00000484781
604
No protein
-
BRDT-223
ENST00000680194
1001
251aa
ENSP00000506530
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003713 enables transcription coactivator activity 1 TAS Homo_sapiens(9606) Function GO:0005634 located_in nucleus 2 IDA,ISS Homo_sapiens(9606) Component GO:0006338 involved_in chromatin remodeling 1 ISS Homo_sapiens(9606) Process GO:0006355 involved_in regulation of DNA-templated transcription 1 IMP Homo_sapiens(9606) Process GO:0006397 involved_in mRNA processing 1 IEA Homo_sapiens(9606) Process GO:0007140 involved_in male meiotic nuclear division 1 ISS Homo_sapiens(9606) Process GO:0007141 involved_in male meiosis I 1 ISS Homo_sapiens(9606) Process GO:0008380 involved_in RNA splicing 1 IEA Homo_sapiens(9606) Process GO:0035092 involved_in sperm DNA condensation 1 ISS Homo_sapiens(9606) Process GO:0042393 enables histone binding 1 IDA Homo_sapiens(9606) Function GO:0043484 involved_in regulation of RNA splicing 1 ISS Homo_sapiens(9606) Process GO:0051039 involved_in positive regulation of transcription involved in meiotic cell cycle 1 ISS Homo_sapiens(9606) Process GO:0070577 enables lysine-acetylated histone binding 1 ISS Homo_sapiens(9606) Function GO:0140566 enables histone reader activity 1 ISS Homo_sapiens(9606) Function
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