Functions and Diseases

RBP Type Non-canonical_RBPs
Diseases N.A.
Drug N.A.
Main interacting RNAs mRNA
Moonlighting functions N.A.
Localizations N.A.
BulkPerturb-seq N.A.

Description

Ensembl ID ENSG00000137040 Gene ID 26953 Accession 9851
Symbol RANBP6 Alias NA Full Name RAN binding protein 6
Status Confidence Length 4601 bases Strand Minus strand
Position 9 : 6011025 - 6015625 RNA binding domain N.A.
Summary Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RANBP6-201 ENST00000259569 4600 1105aa ENSP00000259569
RANBP6-202 ENST00000485372 1000 68aa ENSP00000485188
RANBP6-203 ENST00000623170 704 228aa ENSP00000485482

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID
21677Personality4.763e-005-
54133Triglycerides3.9150000E-005-
54134Triglycerides1.4250000E-005-
61344Hypersensitivity2E-923817569
85716Asthma2E-624388013
85717Rhinitis, Allergic, Seasonal2E-624388013
90788Asthma2E-924388013
90789Rhinitis, Allergic, Seasonal2E-924388013
97727Asthma9E-1020860503
102233Asthma2E-1221804549

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000137040homo_sapiensENSP0000029015835.616416.7808homo_sapiensENSP0000025956928.235313.3032
ENSG00000137040homo_sapiensENSP0000034645340.703121.2766homo_sapiensENSP0000025956939.81920.8145
ENSG00000137040homo_sapiensENSP0000040718234.894118.6176homo_sapiensENSP0000025956928.325815.1131
ENSG00000137040homo_sapiensENSP0000049912590.428479.3984homo_sapiensENSP0000025956989.773878.8235
ENSG00000137040homo_sapiensENSP0000033671235.634718.7082homo_sapiensENSP0000025956928.959315.2036

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSG00000137040homo_sapiensENSP0000025956934.027133.3032nomascus_leucogenysENSNLEP0000003676198.687796.5879
ENSG00000137040homo_sapiensENSP0000025956934.027133.3937pan_paniscusENSPPAP0000002834998.687796.8504
ENSG00000137040homo_sapiensENSP0000025956934.027133.3032pan_troglodytesENSPTRP0000006828398.687796.5879
ENSG00000137040homo_sapiensENSP0000025956934.027133.3937gorilla_gorillaENSGGOP0000003414798.687796.8504
ENSG00000137040homo_sapiensENSP0000025956957.194656.1086choloepus_hoffmanniENSCHOP0000000770658.790757.6744
ENSG00000137040homo_sapiensENSP0000025956995.113192.2172echinops_telfairiENSETEP0000001268195.632492.7207
ENSG00000137040homo_sapiensENSP0000025956934.117633.3937cercocebus_atysENSCATP0000000141098.950196.8504
ENSG00000137040homo_sapiensENSP0000025956933.755733.1222macaca_fascicularisENSMFAP0000000935598.677296.8254
ENSG00000137040homo_sapiensENSP0000025956934.027133.3032macaca_nemestrinaENSMNEP0000002910898.687796.5879
ENSG00000137040homo_sapiensENSP0000025956934.117633.3937mandrillus_leucophaeusENSMLEP0000003554298.950196.8504
ENSG00000137040homo_sapiensENSP0000025956998.73396.2896mus_spretusMGP_SPRETEiJ_P005052998.73396.2896
ENSG00000137040homo_sapiensENSP0000025956999.185597.5566capra_hircusENSCHIP0000000288199.185597.5566
ENSG00000137040homo_sapiensENSP0000025956998.1996.1086loxodonta_africanaENSLAFP0000001943398.1996.1086
ENSG00000137040homo_sapiensENSP0000025956999.45798.0995equus_caballusENSECAP0000006223999.45798.0995
ENSG00000137040homo_sapiensENSP0000025956962.443461.1765marmota_marmota_marmotaENSMMMP0000000210799.567197.5469
ENSG00000137040homo_sapiensENSP0000025956917.013616.3801balaenoptera_musculusENSBMSP0001000510810096.2766
ENSG00000137040homo_sapiensENSP0000025956998.461596.2896cavia_porcellusENSCPOP0000000485898.461596.2896
ENSG00000137040homo_sapiensENSP0000025956996.742195.1131ursus_americanusENSUAMP0000002760299.534597.8585
ENSG00000137040homo_sapiensENSP0000025956999.27697.1041sus_scrofaENSSSCP0000000559499.27697.1041
ENSG00000137040homo_sapiensENSP0000025956998.55296.2896octodon_degusENSODEP0000002584798.55296.2896
ENSG00000137040homo_sapiensENSP0000025956998.37195.9276jaculus_jaculusENSJJAP0000000557598.37195.9276
ENSG00000137040homo_sapiensENSP0000025956999.185597.3756delphinapterus_leucasENSDLEP0000002738199.185597.3756
ENSG00000137040homo_sapiensENSP0000025956998.461596.1086mus_caroliMGP_CAROLIEiJ_P004853898.461596.1086
ENSG00000137040homo_sapiensENSP0000025956998.642596.1991mus_musculusENSMUSP0000010050398.642596.1991
ENSG00000137040homo_sapiensENSP0000025956999.004596.7421dipodomys_ordiiENSDORP0000002228999.004596.7421
ENSG00000137040homo_sapiensENSP0000025956996.742194.8416mustela_putorius_furoENSMPUP0000000832498.889996.9473
ENSG00000137040homo_sapiensENSP0000025956933.574732.8507aotus_nancymaaeENSANAP0000003115297.375395.2756
ENSG00000137040homo_sapiensENSP0000025956933.665232.9412saimiri_boliviensis_boliviensisENSSBOP0000003839497.637895.5381
ENSG00000137040homo_sapiensENSP0000025956999.909599.7285chlorocebus_sabaeusENSCSAP0000001802899.909599.7285
ENSG00000137040homo_sapiensENSP0000025956998.73395.8371mesocricetus_auratusENSMAUP0000000253698.73395.8371
ENSG00000137040homo_sapiensENSP0000025956999.09597.3756phocoena_sinusENSPSNP0000002893899.09597.3756
ENSG00000137040homo_sapiensENSP0000025956998.55295.3846rattus_norvegicusENSRNOP0000007479098.55295.3846
ENSG00000137040homo_sapiensENSP0000025956933.755733.1222prolemur_simusENSPSMP0000000282596.883195.0649
ENSG00000137040homo_sapiensENSP0000025956998.37195.5656microtus_ochrogasterENSMOCP0000001017898.37195.5656
ENSG00000137040homo_sapiensENSP0000025956961.176558.371sorex_araneusENSSARP0000000951861.287458.4769
ENSG00000137040homo_sapiensENSP0000025956998.73396.1086peromyscus_maniculatus_bairdiiENSPEMP0000001375598.73396.1086
ENSG00000137040homo_sapiensENSP0000025956998.73396.2896mus_spicilegusENSMSIP0000003055498.73396.2896
ENSG00000137040homo_sapiensENSP0000025956998.73395.8371cricetulus_griseus_chok1gshdENSCGRP0000101059698.73395.8371
ENSG00000137040homo_sapiensENSP0000025956999.185597.8281pteropus_vampyrusENSPVAP0000001465399.185597.8281
ENSG00000137040homo_sapiensENSP0000025956998.37196.2896myotis_lucifugusENSMLUP0000001706298.37196.2896
ENSG00000137040homo_sapiensENSP0000025956998.642596.4706heterocephalus_glaber_femaleENSHGLP0000002883098.642596.4706
ENSG00000137040homo_sapiensENSP0000025956933.665233.3937rhinopithecus_bietiENSRBIP0000002299898.936298.1383
ENSG00000137040homo_sapiensENSP0000025956997.647195.1131procavia_capensisENSPCAP0000000616897.647195.1131
ENSG00000137040homo_sapiensENSP0000025956998.461596.1086nannospalax_galiliENSNGAP0000000598198.461596.1086
ENSG00000137040homo_sapiensENSP0000025956998.55296.8326chinchilla_lanigeraENSCLAP0000002560998.55296.8326
ENSG00000137040homo_sapiensENSP0000025956999.45798.19ictidomys_tridecemlineatusENSSTOP0000002180299.45798.19
ENSG00000137040homo_sapiensENSP0000025956999.27697.9185otolemur_garnettiiENSOGAP0000001665399.27697.9185
ENSG00000137040homo_sapiensENSP0000025956933.303232.8507cebus_imitatorENSCCAP0000001876397.872396.5426
ENSG00000137040homo_sapiensENSP0000025956999.366598.0995urocitellus_parryiiENSUPAP0001001722199.366598.0995
ENSG00000137040homo_sapiensENSP0000025956934.027133.3937rhinopithecus_roxellanaENSRROP0000004399198.687796.8504
ENSG00000137040homo_sapiensENSP0000025956998.91496.0181mus_pahariMGP_PahariEiJ_P002150298.91496.0181
ENSG00000137040homo_sapiensENSP0000025956936.561134.5701propithecus_coquereliENSPCOP0000002103790.58385.6502
ENSG00000137040homo_sapiensENSP0000025956926.877812.8507caenorhabditis_elegansR06A4.4c.133.408315.973
ENSG00000137040homo_sapiensENSP0000025956955.022633.4842caenorhabditis_elegansC53D5.6.155.677733.8828
ENSG00000137040homo_sapiensENSP0000025956967.601848.5973drosophila_melanogasterFBpp007850067.601848.5973
ENSG00000137040homo_sapiensENSP0000025956968.325848.6878ciona_intestinalisENSCINP0000002373168.01848.4685
ENSG00000137040homo_sapiensENSP0000025956967.963849.0498ciona_savignyiENSCSAVP0000000725367.293948.5663
ENSG00000137040homo_sapiensENSP0000025956925.158412.8507saccharomyces_cerevisiaeYBR017C30.283215.4684
ENSG00000137040homo_sapiensENSP0000025956948.235328.1448saccharomyces_cerevisiaeYMR308C48.94428.5583

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005515enables protein binding1IPIHomo_sapiens(9606)Function
GO:0005634is_active_in nucleus1IBAHomo_sapiens(9606)Component
GO:0005737is_active_in cytoplasm1IBAHomo_sapiens(9606)Component
GO:0006606involved_in protein import into nucleus1IBAHomo_sapiens(9606)Process
GO:0008139enables nuclear localization sequence binding1IBAHomo_sapiens(9606)Function
GO:0045202located_in synapse1IEAHomo_sapiens(9606)Component
GO:0061608enables nuclear import signal receptor activity1IBAHomo_sapiens(9606)Function

Expression