RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
Drug
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000136930 Gene ID
5695
Accession
9544
Symbol
PSMB7
Alias
NA
Full Name
proteasome 20S subunit beta 7
Status
Confidence
Length
61980 bases
Strand
Minus strand
Position
9 : 124353465 - 124415444
RNA binding domain
N.A.
Summary
The proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. The encoded protein is a member of the proteasome B-type family, also known as the T1B family, and is a 20S core beta subunit in the proteasome. Expression of this catalytic subunit is downregulated by gamma interferon, and proteolytic processing is required to generate a mature subunit. A pseudogene of this gene is located on the long arm of chromosome 14. [provided by RefSeq, Jul 2012]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
PSMB7-201
ENST00000259457
984
277aa
ENSP00000259457
PSMB7-206
ENST00000498485
967
No protein
-
PSMB7-204
ENST00000474081
546
No protein
-
PSMB7-205
ENST00000478817
388
No protein
-
PSMB7-202
ENST00000441097
650
210aa
ENSP00000393157
PSMB7-203
ENST00000466951
462
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000502 part_of proteasome complex 2 IDA,NAS Homo_sapiens(9606) Component GO:0004175 enables endopeptidase activity 1 IBA Homo_sapiens(9606) Function GO:0004298 enables threonine-type endopeptidase activity 1 IEA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005576 located_in extracellular region 1 TAS Homo_sapiens(9606) Component GO:0005634 located_in nucleus 3 HDA,IBA,IDA Homo_sapiens(9606) Component GO:0005654 located_in nucleoplasm 2 IDA,TAS Homo_sapiens(9606) Component GO:0005737 is_active_in cytoplasm 1 IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 2 IDA,TAS Homo_sapiens(9606) Component GO:0005839 part_of proteasome core complex 2 IDA,ISS Homo_sapiens(9606) Component GO:0010498 involved_in proteasomal protein catabolic process 1 IBA Homo_sapiens(9606) Process GO:0016604 located_in nuclear body 1 IDA Homo_sapiens(9606) Component GO:0019774 part_of proteasome core complex, beta-subunit complex 2 IBA,ISS Homo_sapiens(9606) Component GO:0034774 located_in secretory granule lumen 1 TAS Homo_sapiens(9606) Component GO:0043161 involved_in proteasome-mediated ubiquitin-dependent protein catabolic process 1 NAS Homo_sapiens(9606) Process GO:1904813 located_in ficolin-1-rich granule lumen 1 TAS Homo_sapiens(9606) Component
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.