RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
N.A.
Localizations
Nucleoli
BulkPerturb-seq
Ensembl ID ENSG00000136874 Gene ID
55014
Accession
11432
Symbol
STX17
Alias
NA
Full Name
syntaxin 17
Status
Confidence
Length
67881 bases
Strand
Plus strand
Position
9 : 99906654 - 99974534
RNA binding domain
N.A.
Summary
Enables SNAP receptor activity; SNARE binding activity; and protein phosphatase binding activity. Involved in several processes, including autophagosome membrane docking; endoplasmic reticulum to Golgi vesicle-mediated transport; and endoplasmic reticulum-Golgi intermediate compartment organization. Acts upstream of or within protein localization to phagophore assembly site. Located in several cellular components, including autophagosome membrane; endoplasmic reticulum-Golgi intermediate compartment; and mitochondria-associated endoplasmic reticulum membrane. Part of SNARE complex. Colocalizes with HOPS complex. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
STX17-201
ENST00000259400
6885
302aa
ENSP00000259400
STX17-208
ENST00000529340
858
45aa
ENSP00000434323
STX17-211
ENST00000533696
611
No protein
-
STX17-210
ENST00000531035
568
41aa
ENSP00000433694
STX17-203
ENST00000525342
675
68aa
ENSP00000433701
STX17-202
ENST00000524405
941
141aa
ENSP00000436666
STX17-205
ENST00000525640
2523
302aa
ENSP00000435981
STX17-212
ENST00000534052
2424
302aa
ENSP00000433484
STX17-207
ENST00000526607
542
41aa
ENSP00000434547
STX17-204
ENST00000525579
342
No protein
-
STX17-206
ENST00000525847
828
No protein
-
STX17-209
ENST00000529385
858
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
26512 Blood Pressure 8.9290000E-005 - 98168 Alopecia Areata 4E-7 20596022
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000149 enables SNARE binding 2 IBA,IDA Homo_sapiens(9606) Function GO:0000421 is_active_in autophagosome membrane 2 IBA,IDA Homo_sapiens(9606) Component GO:0005484 enables SNAP receptor activity 2 IBA,IMP Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005739 NOT located_in mitochondrion 2 IDA Homo_sapiens(9606) Component GO:0005765 NOT located_in lysosomal membrane 1 IDA Homo_sapiens(9606) Component GO:0005776 located_in autophagosome 1 IDA Homo_sapiens(9606) Component GO:0005789 located_in endoplasmic reticulum membrane 1 IDA Homo_sapiens(9606) Component GO:0005791 NOT located_in rough endoplasmic reticulum 1 IDA Homo_sapiens(9606) Component GO:0005793 located_in endoplasmic reticulum-Golgi intermediate compartment 1 IDA Homo_sapiens(9606) Component GO:0005829 located_in cytosol 1 ISS Homo_sapiens(9606) Component GO:0005886 is_active_in plasma membrane 1 IBA Homo_sapiens(9606) Component GO:0006886 involved_in intracellular protein transport 1 IBA Homo_sapiens(9606) Process GO:0006887 involved_in exocytosis 1 IBA Homo_sapiens(9606) Process GO:0006888 involved_in endoplasmic reticulum to Golgi vesicle-mediated transport 1 IMP Homo_sapiens(9606) Process GO:0006906 involved_in vesicle fusion 1 IBA Homo_sapiens(9606) Process GO:0007030 involved_in Golgi organization 1 IMP Homo_sapiens(9606) Process GO:0012505 is_active_in endomembrane system 1 IBA Homo_sapiens(9606) Component GO:0012507 located_in ER to Golgi transport vesicle membrane 1 IEA Homo_sapiens(9606) Component GO:0016240 involved_in autophagosome membrane docking 1 IDA Homo_sapiens(9606) Process GO:0019901 enables protein kinase binding 1 IEA Homo_sapiens(9606) Function GO:0019903 enables protein phosphatase binding 1 IPI Homo_sapiens(9606) Function GO:0030134 located_in COPII-coated ER to Golgi transport vesicle 1 ISS Homo_sapiens(9606) Component GO:0030868 located_in smooth endoplasmic reticulum membrane 1 ISS Homo_sapiens(9606) Component GO:0031201 part_of SNARE complex 2 IBA,IDA Homo_sapiens(9606) Component GO:0033116 located_in endoplasmic reticulum-Golgi intermediate compartment membrane 1 IEA Homo_sapiens(9606) Component GO:0034497 acts_upstream_of_or_within protein localization to phagophore assembly site 1 IDA Homo_sapiens(9606) Process GO:0044233 located_in mitochondria-associated endoplasmic reticulum membrane 1 IDA Homo_sapiens(9606) Component GO:0048278 involved_in vesicle docking 1 IBA Homo_sapiens(9606) Process GO:0097111 involved_in endoplasmic reticulum-Golgi intermediate compartment organization 1 IMP Homo_sapiens(9606) Process GO:0097352 involved_in autophagosome maturation 2 IDA,IMP Homo_sapiens(9606) Process
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