RBP Type
Canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme Transmemebrane
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000135587 Gene ID
6610
Accession
11121
Symbol
SMPD2
Alias
ISC1;NSMASE;NSMASE1
Full Name
sphingomyelin phosphodiesterase 2
Status
Confidence
Length
3196 bases
Strand
Plus strand
Position
6 : 109440724 - 109443919
RNA binding domain
Exo_endo_phos
Summary
This gene encodes a protein which was initially identified as a sphingomyelinase based on sequence similarity between bacterial sphingomyelinases and a yeast protein. Subsequent studies showed that its biological function is less likely to be as a sphingomyelinase and instead as a lysophospholipase. [provided by RefSeq, Oct 2009]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
ENSP00000258052
Exo_endo_phos
PF03372
4.4e-12
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0004767 enables sphingomyelin phosphodiesterase activity 2 IBA,IDA Homo_sapiens(9606) Function GO:0005515 enables protein binding 1 IPI Homo_sapiens(9606) Function GO:0005783 is_active_in endoplasmic reticulum 1 IBA Homo_sapiens(9606) Component GO:0005886 located_in plasma membrane 2 ISS,TAS Homo_sapiens(9606) Component GO:0005901 is_active_in caveola 1 IBA Homo_sapiens(9606) Component GO:0006684 involved_in sphingomyelin metabolic process 1 IBA Homo_sapiens(9606) Process GO:0006685 involved_in sphingomyelin catabolic process 1 IDA Homo_sapiens(9606) Process GO:0008081 enables phosphoric diester hydrolase activity 1 IDA Homo_sapiens(9606) Function GO:0030149 involved_in sphingolipid catabolic process 1 IBA Homo_sapiens(9606) Process GO:0046513 involved_in ceramide biosynthetic process 1 IBA Homo_sapiens(9606) Process GO:0046872 enables metal ion binding 1 IEA Homo_sapiens(9606) Function GO:0071944 is_active_in cell periphery 1 IBA Homo_sapiens(9606) Component
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