Home
Welcome to
RBP
World!
Species
Families
Diseases
Cancers
Genetic diseases
RNA virus diseases
SARS-CoV-2 virus
Dengue virus
Zika virus
CHIKV virus
HIV virus
IAV virus
RV virus
SINV virus
VEEV virus
Flaviviruses virus
Cov-OC43 virus
Drugs
Functions
Downstream networks
RNA partners
tRNA
mRNA
snoRNA
rRNA
ncRNA
snRNA
Diverse
Moonlighting functions
RNA-binding metabolic enzymes
RNA-binding E3 ligases
RNA-binding DUBs
RNA-binding kinases
DRBPs
Transmemebrane RBPs
Condensates
P-body
Stress granule
Nucleolus
Fibrillar center
Nucleoli
Nucleoli rim
RNA Interactomes
U1
U2
U3
5S
NORAD
RMRP
Tools
RBPredictor
Blast
Datasets
Download
Human
Mouse
Fly
Worm
Arabidopsis
Rice
Contact
Help
Eu
RBP
DB
Eu
RBP
DB2 File List
Functions and Diseases
RBP Type
Non-canonical_RBPs
Diseases
Cancer
Drug
N.A.
Main interacting RNAs
mRNA
Moonlighting functions
N.A.
Localizations
N.A.
BulkPerturb-seq
N.A.
Description
Ensembl ID
ENSG00000132953
Gene ID
64328
Accession
17796
Symbol
XPO4
Alias
exp4
Full Name
exportin 4
Status
Confidence
Length
125418 bases
Strand
Minus strand
Position
13 : 20777329 - 20902746
RNA binding domain
N.A.
Summary
XPO4 belongs to a large family of karyopherins (see MIM 602738) that mediate the transport of proteins and other cargo between the nuclear and cytoplasmic compartments (Lipowsky et al., 2000 [PubMed 10944119]).[supplied by OMIM, Mar 2009]
RNA binding domains (RBDs)
Search:
Protein
Domain
Pfam ID
E-value
Domain number
Protein
Domain
Pfam ID
E-value
Domain number
No data available in table
Showing 0 to 0 of 0 entries
RNA binding proteomes (RBPomes)
Show
10
20
50
entries
Search:
Pubmed ID
Full Name
Cell
Author
Time
Doi
30824702
PtexRIC_PMID30824702_293T_human
293T
Erika C Urdaneta
2019 Mar 1
doi: 10.1038/s41467-019-08942-3
33693821
PP.enrichment.RIC_PMID33693821_Hela_human
Hela
Zheng Zhang
2021 Jun 21
doi: 10.1093/nar/gkab156
35427468
qRIC_PMID35427468_293T_human
293T
Carlos Henrique Vieira-Vieira
2022 Jun 2
doi: 10.1016/j.molcel.2022.03.024.?Epub 2022 Apr 14
37421941
RIC_PMID37421941_Hydra10_human
Wenhao Jin
2023 Jul 20
doi: 10.1016/j.molcel.2023.06.019.?Epub 2023 Jul 7
Showing 1 to 4 of 4 entries
Previous
1
Next
Literatures on RNA binding capacity
Show
10
20
50
entries
Search:
Pubmed ID
Title
Author
Time
Journal
27306458
Structure of the exportin Xpo4 in complex with RanGTP and the hypusine-containing translation factor eIF5A.
Metin Aksu
2016-06-16
Nature communications
31023722
Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122.
Metin Aksu
2019-06-03
The Journal of cell biology
Showing 1 to 2 of 2 entries
Previous
1
Next
Transcripts
Show
10
20
50
entries
Search:
Name
Transcript ID
bp
Protein
Translation ID
XPO4-201
ENST00000255305
9857
1151aa
ENSP00000255305
XPO4-202
ENST00000465018
367
No protein
-
XPO4-203
ENST00000490513
914
No protein
-
Showing 1 to 3 of 3 entries
Previous
1
Next
Gene Model
Click here to download ENSG00000132953's gene model file
Pathways
Show
10
20
50
entries
Search:
Pathway ID
Pathway Name
Source
Showing 1 to 1 of 1 entries
Previous
1
Next
Phenotypes
Show
10
20
50
entries
Search:
ensgID
Trait
pValue
Pubmed ID
13081
Bipolar Disorder
6.22E-5
19488044
16917
Neuroblastoma
5.81e-007
23222812
30531
Monocytes
7.9200000E-005
-
30548
Monocytes
4.3530000E-005
-
Showing 1 to 4 of 4 entries
Previous
1
Next
GWAS
Show
10
20
50
entries
Search:
ensgID
SNP
Chromosome
Position
Trait
PubmedID
Or or BEAT
EFO ID
ENSG00000132953
rs4294650
13
20782401
Educational attainment (MTAG)
30038396
0.0095
EFO_0004784
ENSG00000132953
rs4294650
13
20782401
Highest math class taken (MTAG)
30038396
0.013
EFO_0004875
ENSG00000132953
rs4294650
13
20782401
Cognitive performance (MTAG)
30038396
0.0171
EFO_0008354
ENSG00000132953
rs2585897
13
20824840
PR interval
30046033
1.2
EFO_0004462
ENSG00000132953
rs4294650
13
20782401
General cognitive ability
29844566
5.92
EFO_0004337
Showing 1 to 5 of 5 entries
Previous
1
Next
Protein-Protein Interaction (PPI)
Click here to download ENSG00000132953's PPI file
Paralogs
Show
10
20
50
entries
Search:
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000132953
homo_sapiens
ENSP00000427975
39.7978
20.4044
homo_sapiens
ENSP00000255305
37.6195
19.2876
ENSG00000132953
homo_sapiens
ENSP00000252512
41.3983
20.6992
homo_sapiens
ENSP00000255305
39.0964
19.5482
Showing 1 to 2 of 2 entries
Previous
1
Next
Orthologs
Show
10
20
50
entries
Search:
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
ENSG00000132953
homo_sapiens
ENSP00000255305
100
99.9131
nomascus_leucogenys
ENSNLEP00000002326
100
99.9131
ENSG00000132953
homo_sapiens
ENSP00000255305
100
100
pan_paniscus
ENSPPAP00000016794
100
100
ENSG00000132953
homo_sapiens
ENSP00000255305
99.9131
99.8262
pongo_abelii
ENSPPYP00000005919
99.9131
99.8262
ENSG00000132953
homo_sapiens
ENSP00000255305
93.6577
93.2233
pan_troglodytes
ENSPTRP00000009704
94.4785
94.0403
ENSG00000132953
homo_sapiens
ENSP00000255305
100
100
gorilla_gorilla
ENSGGOP00000000879
100
100
ENSG00000132953
homo_sapiens
ENSP00000255305
96.7854
94.7003
ornithorhynchus_anatinus
ENSOANP00000014369
98.7589
96.6312
ENSG00000132953
homo_sapiens
ENSP00000255305
99.1312
97.4805
sarcophilus_harrisii
ENSSHAP00000023350
99.1312
97.4805
ENSG00000132953
homo_sapiens
ENSP00000255305
77.5847
76.1946
notamacropus_eugenii
ENSMEUP00000008681
77.7875
76.3937
ENSG00000132953
homo_sapiens
ENSP00000255305
76.1077
75.7602
choloepus_hoffmanni
ENSCHOP00000003677
76.0417
75.6944
ENSG00000132953
homo_sapiens
ENSP00000255305
97.7411
97.3067
dasypus_novemcinctus
ENSDNOP00000006219
99.2939
98.8526
Showing 1 to 10 of 219 entries
Previous
1
2
3
4
5
…
22
Next
Gene Ontology
Show
10
20
50
entries
Search:
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005049
enables nuclear export signal receptor activity
2
IBA,IDA
Homo_sapiens(9606)
Function
GO:0006611
involved_in protein export from nucleus
2
IBA,IDA
Homo_sapiens(9606)
Process
GO:0005515
enables protein binding
1
IPI
Homo_sapiens(9606)
Function
GO:0005634
is_active_in nucleus
1
IDA
Homo_sapiens(9606)
Component
GO:0005643
part_of nuclear pore
1
IBA
Homo_sapiens(9606)
Component
GO:0005654
located_in nucleoplasm
1
IDA
Homo_sapiens(9606)
Component
GO:0005737
is_active_in cytoplasm
1
IBA
Homo_sapiens(9606)
Component
GO:0005829
located_in cytosol
1
IDA
Homo_sapiens(9606)
Component
GO:0031267
enables small GTPase binding
1
IDA
Homo_sapiens(9606)
Function
GO:0046827
involved_in positive regulation of protein export from nucleus
1
IMP
Homo_sapiens(9606)
Process
Showing 1 to 10 of 10 entries
Previous
1
Next
Expression
−1
0
1
2
3
4
TPM
plotly-logomark
Contents
Description
RBPomes
Literatures
Transcripts
Gene Model
Phenotypes
GWAS
PPI
Paralogs
Orthologs
Gene Ontology
Expression