RBP Type
Non-canonical_RBPs
Diseases
N.A.
Drug
N.A.
Main interacting RNAs
N.A.
Moonlighting functions
Metabolic enzyme
Localizations
N.A.
BulkPerturb-seq
Ensembl ID ENSG00000132837 Gene ID
29958
Accession
24475
Symbol
DMGDH
Alias
DMGDHD;ME2GLYDH
Full Name
dimethylglycine dehydrogenase
Status
Confidence
Length
72111 bases
Strand
Minus strand
Position
5 : 78997564 - 79069674
RNA binding domain
N.A.
Summary
This gene encodes an enzyme involved in the catabolism of choline, catalyzing the oxidative demethylation of dimethylglycine to form sarcosine. The enzyme is found as a monomer in the mitochondrial matrix, and uses flavin adenine dinucleotide and folate as cofactors. Mutation in this gene causes dimethylglycine dehydrogenase deficiency, characterized by a fishlike body odor, chronic muscle fatigue, and elevated levels of the muscle form of creatine kinase in serum. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
DMGDH-201
ENST00000255189
3173
866aa
ENSP00000255189
DMGDH-209
ENST00000523732
2777
613aa
ENSP00000430972
DMGDH-203
ENST00000518477
1966
98aa
ENSP00000427834
DMGDH-202
ENST00000517853
1517
106aa
ENSP00000428995
DMGDH-208
ENST00000523201
583
No protein
-
DMGDH-207
ENST00000521052
554
50aa
ENSP00000430133
DMGDH-210
ENST00000524206
572
50aa
ENSP00000428092
DMGDH-205
ENST00000520388
661
No protein
-
DMGDH-204
ENST00000518707
455
No protein
-
DMGDH-206
ENST00000520855
550
No protein
-
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
8543 Blood Pressure 6.4715298450933E-6 17903302 8561 Blood Pressure 1.87210932337905E-6 17903302 9735 Echocardiography 2.18452592267932E-8 17903301 25670 Arteries 4.0630000E-005 - 40265 Platelet Function Tests 1.0082500E-005 - 55937 Selenium 6.3120000E-005 - 63269 Selenium 2E-11 25343990 78879 Selenium 2E-39 25343990 88976 Selenium 1E-16 25343990 91132 Metabolism 1E-19 24816252 91763 Selenium 3E-13 25343990 96169 Insulin Resistance 2E-9 23378610 97207 Selenium 2E-15 25343990 98195 Selenium 9E-28 23720494
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003723 enables RNA binding 1 HDA Homo_sapiens(9606) Function GO:0005737 is_active_in cytoplasm 1 IBA Homo_sapiens(9606) Component GO:0005739 is_active_in mitochondrion 2 IBA,IDA Homo_sapiens(9606) Component GO:0005759 is_active_in mitochondrial matrix 3 IBA,NAS,TAS Homo_sapiens(9606) Component GO:0006579 involved_in amino-acid betaine catabolic process 1 IEA Homo_sapiens(9606) Process GO:0009055 enables electron transfer activity 1 NAS Homo_sapiens(9606) Function GO:0019695 involved_in choline metabolic process 1 NAS Homo_sapiens(9606) Process GO:0022900 involved_in electron transport chain 1 IEA Homo_sapiens(9606) Process GO:0042426 involved_in choline catabolic process 1 IMP Homo_sapiens(9606) Process GO:0047865 enables dimethylglycine dehydrogenase activity 2 IBA,IMP Homo_sapiens(9606) Function
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