RBPWorld - a comprehensive database of RNA Binding Proteins

Functions and Diseases

RBP Type	Non-canonical_RBPs
Diseases	CancerSARS-COV-2
Drug	N.A.
Main interacting RNAs	N.A.
Moonlighting functions	N.A.
Localizations	Stress granucle
BulkPerturb-seq	N.A.

Description

Ensembl ID	ENSG00000132646	Gene ID	5111	Accession	8729
Symbol	PCNA	Alias	ATLD2	Full Name	proliferating cell nuclear antigen
Status	Confidence	Length	11674 bases	Strand	Minus strand
Position	20 : 5114953 - 5126626	RNA binding domain	N.A.
Summary	The protein encoded by this gene is found in the nucleus and is a cofactor of DNA polymerase delta. The encoded protein acts as a homotrimer and helps increase the processivity of leading strand synthesis during DNA replication. In response to DNA damage, this protein is ubiquitinated and is involved in the RAD6-dependent DNA repair pathway. Two transcript variants encoding the same protein have been found for this gene. Pseudogenes of this gene have been described on chromosome 4 and on the X chromosome. [provided by RefSeq, Jul 2008]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal
29074968	Coding and noncoding landscape of extracellular RNA released by human glioma stem cells.	Zhiyun Wei	2017-10-26	Nature communications
26886233	PCNA-binding proteins in the archaea: novel functionality beyond the conserved core.	A Stuart MacNeill	2016-08-01	Current genetics
25027823	The natural history of ADP-ribosyltransferases and the ADP-ribosylation system.	L Aravind	2015-01-01	Current topics in microbiology and immunology
19881914	Regulation of interactions with sliding clamps during DNA replication and repair.	J Francisco FJ Saro López	2009-05-01	Current genomics
35194922	Top-down stepwise refinement identifies coding and noncoding RNA-associated epigenetic regulatory maps in malignant glioma.	Yutao Huang	2022-04-01	Journal of cellular and molecular medicine
17567613	PLP/DM20 ratio is regulated by hnRNPH and F and a novel G-rich enhancer in oligodendrocytes.	Erming Wang	2007-01-01	Nucleic acids research
35883563	Small-Molecule Inhibitors Targeting FEN1 for Cancer Therapy.	Fan Yang	2022-07-20	Biomolecules
37574469	High-density lipoprotein regulates angiogenesis by long non-coding RNA HDRACA.	Zhi-Wei Mo	2023-08-14	Signal transduction and targeted therapy
30184152	SUMO-1 modification of FEN1 facilitates its interaction with Rad9-Rad1-Hus1 to counteract DNA replication stress.	Xiaoli Xu	2018-10-01	Journal of molecular cell biology
35715491	Efficient discrimination against RNA-containing primers by human DNA polymerase ε.	E Alisa Lisova	2022-06-17	Scientific reports
21245041	PCNA directs type 2 RNase H activity on DNA replication and repair substrates.	Doryen Bubeck	2011-05-01	Nucleic acids research
32083017	Overexpression of IGF2BP3 as a Potential Oncogene in Ovarian Clear Cell Carcinoma.	Huidi Liu	2019-01-01	Frontiers in oncology

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
PCNA-201	ENST00000379143	1276	261aa	ENSP00000368438
PCNA-202	ENST00000379160	1359	261aa	ENSP00000368458

Gene Model

Click here to download ENSG00000132646's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSG00000132646's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000132646

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	nomascus_leucogenys	ENSNLEP00000009397	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	pan_paniscus	ENSPPAP00000020249	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	pongo_abelii	ENSPPYP00000012059	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	pan_troglodytes	ENSPTRP00000022674	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	gorilla_gorilla	ENSGGOP00000001670	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	58.6207	47.8927	ornithorhynchus_anatinus	ENSOANP00000041493	54.4484	44.484
ENSG00000132646	homo_sapiens	ENSP00000368438	98.0843	96.5517	sarcophilus_harrisii	ENSSHAP00000034902	98.0843	96.5517
ENSG00000132646	homo_sapiens	ENSP00000368438	89.272	87.7395	notamacropus_eugenii	ENSMEUP00000007826	98.3122	96.6245
ENSG00000132646	homo_sapiens	ENSP00000368438	46.3602	45.977	choloepus_hoffmanni	ENSCHOP00000009064	64.7059	64.1711
ENSG00000132646	homo_sapiens	ENSP00000368438	98.4674	97.318	dasypus_novemcinctus	ENSDNOP00000014138	96.6165	95.4887
ENSG00000132646	homo_sapiens	ENSP00000368438	72.4138	72.0307	erinaceus_europaeus	ENSEEUP00000002812	72.973	72.5869
ENSG00000132646	homo_sapiens	ENSP00000368438	83.1418	83.1418	echinops_telfairi	ENSETEP00000005344	83.4615	83.4615
ENSG00000132646	homo_sapiens	ENSP00000368438	81.2261	75.8621	echinops_telfairi	ENSETEP00000010514	86.8852	81.1475
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	callithrix_jacchus	ENSCJAP00000067013	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	cercocebus_atys	ENSCATP00000013469	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	macaca_fascicularis	ENSMFAP00000031561	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	macaca_mulatta	ENSMMUP00000062455	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	macaca_nemestrina	ENSMNEP00000015788	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	papio_anubis	ENSPANP00000017017	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	mandrillus_leucophaeus	ENSMLEP00000002676	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	71.2644	70.8812	tursiops_truncatus	ENSTTRP00000014564	99.4652	98.9305
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	vulpes_vulpes	ENSVVUP00000033727	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	98.4674	96.9349	mus_spretus	MGP_SPRETEiJ_P0056901	98.4674	96.9349
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.8506	equus_asinus	ENSEASP00005047909	89.9306	89.5833
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	capra_hircus	ENSCHIP00000015091	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	loxodonta_africana	ENSLAFP00000005386	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	panthera_leo	ENSPLOP00000001487	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	ailuropoda_melanoleuca	ENSAMEP00000009571	94.5455	94.5455
ENSG00000132646	homo_sapiens	ENSP00000368438	79.6935	77.0115	bos_indicus_hybrid	ENSBIXP00005008541	63.8037	61.6564
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	oryctolagus_cuniculus	ENSOCUP00000003512	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.8506	equus_caballus	ENSECAP00000010854	99.2337	98.8506
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	canis_lupus_familiaris	ENSCAFP00845039052	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	panthera_pardus	ENSPPRP00000027208	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	84.6743	81.9923	marmota_marmota_marmota	ENSMMMP00000011269	87.0079	84.252
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	marmota_marmota_marmota	ENSMMMP00000000329	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	balaenoptera_musculus	ENSBMSP00010014453	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	97.318	96.5517	balaenoptera_musculus	ENSBMSP00010004136	97.318	96.5517
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.8506	cavia_porcellus	ENSCPOP00000008297	99.2337	98.8506
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	felis_catus	ENSFCAP00000008406	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	ursus_americanus	ENSUAMP00000015332	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	98.0843	96.5517	monodelphis_domestica	ENSMODP00000014595	98.0843	96.5517
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	bison_bison_bison	ENSBBBP00000014548	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	bison_bison_bison	ENSBBBP00000012502	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	65.9004	65.5172	monodon_monoceros	ENSMMNP00015022189	96.0894	95.5307
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	monodon_monoceros	ENSMMNP00015005157	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	96.5517	95.4023	monodon_monoceros	ENSMMNP00015010230	96.5517	95.4023
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	sus_scrofa	ENSSSCP00000080593	95.5882	95.5882
ENSG00000132646	homo_sapiens	ENSP00000368438	90.8046	88.1226	sus_scrofa	ENSSSCP00000075430	93.6759	90.9091
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	microcebus_murinus	ENSMICP00000023222	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	70.4981	70.4981	octodon_degus	ENSODEP00000009531	99.4595	99.4595
ENSG00000132646	homo_sapiens	ENSP00000368438	85.8238	83.908	octodon_degus	ENSODEP00000015385	91.4286	89.3878
ENSG00000132646	homo_sapiens	ENSP00000368438	87.3563	82.7586	octodon_degus	ENSODEP00000017149	97.4359	92.3077
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	ovis_aries_rambouillet	ENSOARP00020015124	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	ursus_maritimus	ENSUMAP00000005923	86.3787	86.3787
ENSG00000132646	homo_sapiens	ENSP00000368438	52.8736	52.1073	ochotona_princeps	ENSOPRP00000007892	52.8736	52.1073
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	delphinapterus_leucas	ENSDLEP00000020727	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	96.5517	95.4023	delphinapterus_leucas	ENSDLEP00000027941	96.5517	95.4023
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	95.7854	physeter_catodon	ENSPCTP00005015830	97.7011	95.7854
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	physeter_catodon	ENSPCTP00005012227	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	98.8506	97.318	mus_caroli	MGP_CAROLIEiJ_P0054789	98.8506	97.318
ENSG00000132646	homo_sapiens	ENSP00000368438	98.4674	96.9349	mus_musculus	ENSMUSP00000028817	98.4674	96.9349
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	dipodomys_ordii	ENSDORP00000022105	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	mustela_putorius_furo	ENSMPUP00000006142	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	aotus_nancymaae	ENSANAP00000040255	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	99.6169	saimiri_boliviensis_boliviensis	ENSSBOP00000006646	100	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	vicugna_pacos	ENSVPAP00000006517	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	chlorocebus_sabaeus	ENSCSAP00000009557	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.8506	tupaia_belangeri	ENSTBEP00000005136	99.6154	99.2308
ENSG00000132646	homo_sapiens	ENSP00000368438	98.8506	98.4674	mesocricetus_auratus	ENSMAUP00000009744	98.8506	98.4674
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	phocoena_sinus	ENSPSNP00000007944	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	94.636	92.3372	phocoena_sinus	ENSPSNP00000002357	93.5606	91.2879
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	camelus_dromedarius	ENSCDRP00005012482	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	carlito_syrichta	ENSTSYP00000019084	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	panthera_tigris_altaica	ENSPTIP00000003811	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.4674	rattus_norvegicus	ENSRNOP00000028887	99.2337	98.4674
ENSG00000132646	homo_sapiens	ENSP00000368438	100	99.6169	prolemur_simus	ENSPSMP00000011782	100	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	98.4674	96.9349	microtus_ochrogaster	ENSMOCP00000022631	98.4674	96.9349
ENSG00000132646	homo_sapiens	ENSP00000368438	71.2644	70.8812	sorex_araneus	ENSSARP00000003677	71.2644	70.8812
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	98.8506	peromyscus_maniculatus_bairdii	ENSPEMP00000010943	99.2337	98.8506
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	bos_mutus	ENSBMUP00000006828	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	98.4674	96.9349	mus_spicilegus	ENSMSIP00000024114	98.4674	96.9349
ENSG00000132646	homo_sapiens	ENSP00000368438	98.8506	98.4674	cricetulus_griseus_chok1gshd	ENSCGRP00001027378	98.8506	98.4674
ENSG00000132646	homo_sapiens	ENSP00000368438	83.908	83.908	pteropus_vampyrus	ENSPVAP00000002704	83.908	83.908
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	myotis_lucifugus	ENSMLUP00000001552	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	98.0843	96.5517	vombatus_ursinus	ENSVURP00010015642	98.0843	96.5517
ENSG00000132646	homo_sapiens	ENSP00000368438	94.2529	91.954	vombatus_ursinus	ENSVURP00010031277	93.8931	91.6031
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	98.8506	rhinolophus_ferrumequinum	ENSRFEP00010028385	99.6169	98.8506
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	neovison_vison	ENSNVIP00000024373	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	bos_taurus	ENSBTAP00000007967	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	heterocephalus_glaber_female	ENSHGLP00000023808	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	41.7625	40.2299	heterocephalus_glaber_female	ENSHGLP00000053706	98.1982	94.5946
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	rhinopithecus_bieti	ENSRBIP00000007375	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	89.6552	89.6552	canis_lupus_dingo	ENSCAFP00020001424	95.1219	95.1219
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	sciurus_vulgaris	ENSSVLP00005007588	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	98.0843	96.5517	phascolarctos_cinereus	ENSPCIP00000026533	98.0843	96.5517
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.2337	procavia_capensis	ENSPCAP00000009774	99.6169	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	nannospalax_galili	ENSNGAP00000024637	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	75.4789	70.8812	nannospalax_galili	ENSNGAP00000024292	90.7834	85.2535
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	bos_grunniens	ENSBGRP00000009950	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	chinchilla_lanigera	ENSCLAP00000019500	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	cervus_hanglu_yarkandensis	ENSCHYP00000033065	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	catagonus_wagneri	ENSCWAP00000009381	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	ictidomys_tridecemlineatus	ENSSTOP00000022388	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	84.2912	81.9923	ictidomys_tridecemlineatus	ENSSTOP00000015682	88	85.6
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	otolemur_garnettii	ENSOGAP00000017004	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	cebus_imitator	ENSCCAP00000038769	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	urocitellus_parryii	ENSUPAP00010001719	89.3103	89.3103
ENSG00000132646	homo_sapiens	ENSP00000368438	99.2337	99.2337	moschus_moschiferus	ENSMMSP00000022071	99.2337	99.2337
ENSG00000132646	homo_sapiens	ENSP00000368438	99.6169	99.6169	moschus_moschiferus	ENSMMSP00000012088	99.6169	99.6169
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	rhinopithecus_roxellana	ENSRROP00000010426	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	98.8506	98.4674	mus_pahari	MGP_PahariEiJ_P0065766	98.8506	98.4674
ENSG00000132646	homo_sapiens	ENSP00000368438	100	100	propithecus_coquereli	ENSPCOP00000008972	100	100
ENSG00000132646	homo_sapiens	ENSP00000368438	72.0307	47.8927	caenorhabditis_elegans	W03D2.4.1	71.4829	47.5285
ENSG00000132646	homo_sapiens	ENSP00000368438	73.1801	47.5096	drosophila_melanogaster	FBpp0080803	74.902	48.6275
ENSG00000132646	homo_sapiens	ENSP00000368438	85.8238	70.4981	drosophila_melanogaster	FBpp0085619	86.1538	70.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	88.5057	74.3295	ciona_intestinalis	ENSCINP00000004842	88.1679	74.0458
ENSG00000132646	homo_sapiens	ENSP00000368438	93.4866	87.3563	petromyzon_marinus	ENSPMAP00000008567	93.4866	87.3563
ENSG00000132646	homo_sapiens	ENSP00000368438	94.636	84.6743	eptatretus_burgeri	ENSEBUP00000001243	95	85
ENSG00000132646	homo_sapiens	ENSP00000368438	96.5517	91.954	latimeria_chalumnae	ENSLACP00000006575	96.9231	92.3077
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	91.954	lepisosteus_oculatus	ENSLOCP00000019251	94.697	90.9091
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	89.6552	clupea_harengus	ENSCHAP00000050825	92.5651	86.9888
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	danio_rerio	ENSDARP00000070780	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.4215	carassius_auratus	ENSCARP00000066956	96.1538	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	91.1877	carassius_auratus	ENSCARP00000030068	96.1538	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	89.272	83.908	carassius_auratus	ENSCARP00000082192	95.8848	90.1235
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	91.1877	astyanax_mexicanus	ENSAMXP00000021176	96.1538	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	ictalurus_punctatus	ENSIPUP00000036734	84.1751	79.798
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	esox_lucius	ENSELUP00000007729	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	electrophorus_electricus	ENSEEEP00000028033	96.1538	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	oncorhynchus_kisutch	ENSOKIP00005044267	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	72.4138	62.069	oncorhynchus_kisutch	ENSOKIP00005026241	82.8947	71.0526
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	oncorhynchus_kisutch	ENSOKIP00005068554	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	59.0038	47.1264	oncorhynchus_mykiss	ENSOMYP00000060320	68.4444	54.6667
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	oncorhynchus_mykiss	ENSOMYP00000031943	36.9436	34.8665
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	oncorhynchus_mykiss	ENSOMYP00000105370	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	96.1686	90.8046	salmo_salar	ENSSSAP00000018360	88.0702	83.1579
ENSG00000132646	homo_sapiens	ENSP00000368438	72.7969	65.5172	salmo_salar	ENSSSAP00000174671	76.3052	68.6747
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	89.6552	salmo_salar	ENSSSAP00000068146	93.2836	87.3134
ENSG00000132646	homo_sapiens	ENSP00000368438	71.2644	59.387	salmo_salar	ENSSSAP00000181051	83.0357	69.1964
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	salmo_trutta	ENSSTUP00000078613	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	salmo_trutta	ENSSTUP00000110575	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	73.9464	62.4521	salmo_trutta	ENSSTUP00000010958	80.4167	67.9167
ENSG00000132646	homo_sapiens	ENSP00000368438	94.636	89.272	gadus_morhua	ENSGMOP00000014699	95	89.6154
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	91.1877	fundulus_heteroclitus	ENSFHEP00000034210	95.7692	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	poecilia_reticulata	ENSPREP00000018020	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	xiphophorus_maculatus	ENSXMAP00000014924	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	90.8046	85.8238	oryzias_latipes	ENSORLP00000037447	79.5302	75.1678
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	cyclopterus_lumpus	ENSCLMP00005036665	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	oreochromis_niloticus	ENSONIP00000070559	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	haplochromis_burtoni	ENSHBUP00000029821	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	astatotilapia_calliptera	ENSACLP00000017122	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	sparus_aurata	ENSSAUP00010009488	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	lates_calcarifer	ENSLCAP00010007860	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	96.9349	90.4215	xenopus_tropicalis	ENSXETP00000017963	96.9349	90.4215
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	94.2529	chrysemys_picta_bellii	ENSCPBP00000003825	97.3282	93.8931
ENSG00000132646	homo_sapiens	ENSP00000368438	97.318	93.4866	sphenodon_punctatus	ENSSPUP00000010915	97.6923	93.8462
ENSG00000132646	homo_sapiens	ENSP00000368438	97.318	93.4866	crocodylus_porosus	ENSCPRP00005023547	96.9466	93.1298
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	89.6552	laticauda_laticaudata	ENSLLTP00000020230	95.7854	89.6552
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.0383	notechis_scutatus	ENSNSUP00000019859	95.7854	90.0383
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.0383	pseudonaja_textilis	ENSPTXP00000020301	95.7854	90.0383
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	93.8697	anas_platyrhynchos_platyrhynchos	ENSAPLP00000028238	97.3282	93.5115
ENSG00000132646	homo_sapiens	ENSP00000368438	88.5057	85.4406	gallus_gallus	ENSGALP00010029104	91.6667	88.4921
ENSG00000132646	homo_sapiens	ENSP00000368438	97.318	93.8697	meleagris_gallopavo	ENSMGAP00000000064	96.9466	93.5115
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	91.1877	serinus_canaria	ENSSCAP00000022865	97.6378	93.7008
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	93.8697	parus_major	ENSPMJP00000021262	97.3282	93.5115
ENSG00000132646	homo_sapiens	ENSP00000368438	91.5709	84.2912	anolis_carolinensis	ENSACAP00000027957	71.5569	65.8683
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	neolamprologus_brichardi	ENSNBRP00000023642	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	89.6552	naja_naja	ENSNNAP00000014706	95.4023	89.6552
ENSG00000132646	homo_sapiens	ENSP00000368438	83.908	78.9272	podarcis_muralis	ENSPMRP00000018552	93.9914	88.412
ENSG00000132646	homo_sapiens	ENSP00000368438	96.9349	91.954	podarcis_muralis	ENSPMRP00000018560	96.9349	91.954
ENSG00000132646	homo_sapiens	ENSP00000368438	74.7126	71.6475	geospiza_fortis	ENSGFOP00000021803	91.1215	87.3832
ENSG00000132646	homo_sapiens	ENSP00000368438	89.6552	86.2069	taeniopygia_guttata	ENSTGUP00000028759	86.9888	83.6431
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	93.8697	taeniopygia_guttata	ENSTGUP00000029503	97.3282	93.5115
ENSG00000132646	homo_sapiens	ENSP00000368438	84.6743	77.7778	erpetoichthys_calabaricus	ENSECRP00000000340	83.0827	76.3158
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	89.6552	kryptolebias_marmoratus	ENSKMAP00000003800	95.7692	90
ENSG00000132646	homo_sapiens	ENSP00000368438	96.1686	91.954	salvator_merianae	ENSSMRP00000019891	96.1686	91.954
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	91.1877	oryzias_javanicus	ENSOJAP00000015325	95.7692	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	amphilophus_citrinellus	ENSACIP00000007861	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	dicentrarchus_labrax	ENSDLAP00005058103	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	90.0383	amphiprion_percula	ENSAPEP00000025333	95.3846	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	90.8046	oryzias_sinensis	ENSOSIP00000023441	95.3846	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	94.2529	pelodiscus_sinensis	ENSPSIP00000002120	97.3282	93.8931
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	94.2529	gopherus_evgoodei	ENSGEVP00005013041	97.3282	93.8931
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	94.2529	chelonoidis_abingdonii	ENSCABP00000031143	97.3282	93.8931
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	seriola_dumerili	ENSSDUP00000004184	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	cottoperca_gobio	ENSCGOP00000011779	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	77.0115	74.3295	struthio_camelus_australis	ENSSCUP00000010981	87.7729	84.7162
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	93.8697	anser_brachyrhynchus	ENSABRP00000012865	73.487	70.6052
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	gasterosteus_aculeatus	ENSGACP00000007613	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	91.1877	cynoglossus_semilaevis	ENSCSEP00000030429	95.7692	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	poecilia_formosa	ENSPFOP00000010825	80.3226	76.129
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	myripristis_murdjan	ENSMMDP00005006790	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	sander_lucioperca	ENSSLUP00000037909	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	93.8697	strigops_habroptila	ENSSHBP00005007930	97.3282	93.5115
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	90.0383	amphiprion_ocellaris	ENSAOCP00000002571	95.3846	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	97.7011	94.2529	terrapene_carolina_triunguis	ENSTMTP00000007795	97.3282	93.8931
ENSG00000132646	homo_sapiens	ENSP00000368438	62.8353	55.1724	hucho_hucho	ENSHHUP00000033044	83.6735	73.4694
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	hucho_hucho	ENSHHUP00000032632	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	48.659	41.7625	hucho_hucho	ENSHHUP00000057070	81.4103	69.8718
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	hucho_hucho	ENSHHUP00000083562	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	betta_splendens	ENSBSLP00000015230	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	pygocentrus_nattereri	ENSPNAP00000012004	96.1538	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	anabas_testudineus	ENSATEP00000029027	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	62.4521	35.249	saccharomyces_cerevisiae	YBR088C	63.1783	35.6589
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	seriola_lalandi_dorsalis	ENSSLDP00000006599	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	labrus_bergylta	ENSLBEP00000019477	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	pundamilia_nyererei	ENSPNYP00000011905	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	mastacembelus_armatus	ENSMAMP00000022273	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	91.1877	stegastes_partitus	ENSSPAP00000001748	95.7692	91.5385
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	oncorhynchus_tshawytscha	ENSOTSP00005012740	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	oncorhynchus_tshawytscha	ENSOTSP00005042343	95.7692	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	78.5441	68.9655	oncorhynchus_tshawytscha	ENSOTSP00005059076	83.3333	73.1707
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	acanthochromis_polyacanthus	ENSAPOP00000018841	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	97.318	93.4866	aquila_chrysaetos_chrysaetos	ENSACCP00020008341	96.9466	93.1298
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	nothobranchius_furzeri	ENSNFUP00015030058	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	cyprinodon_variegatus	ENSCVAP00000002844	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	90.0383	denticeps_clupeoides	ENSDCDP00000024074	95.3846	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.0383	larimichthys_crocea	ENSLCRP00005033933	95.7692	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	90.0383	takifugu_rubripes	ENSTRUP00000052987	95.3846	90.3846
ENSG00000132646	homo_sapiens	ENSP00000368438	90.8046	86.9732	ficedula_albicollis	ENSFALP00000030813	73.8318	70.7165
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	hippocampus_comes	ENSHCOP00000003160	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.4215	cyprinus_carpio_carpio	ENSCCRP00000030566	96.1538	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	cyprinus_carpio_carpio	ENSCCRP00000030542	96.1538	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	96.9349	93.4866	coturnix_japonica	ENSCJPP00005014338	96.5649	93.1298
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.4215	poecilia_latipinna	ENSPLAP00000001196	80.3226	76.129
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.4215	sinocyclocheilus_grahami	ENSSGRP00000056321	96.1538	90.7692
ENSG00000132646	homo_sapiens	ENSP00000368438	57.8544	55.5556	sinocyclocheilus_grahami	ENSSGRP00000017699	95.5696	91.7721
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	maylandia_zebra	ENSMZEP00005012577	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.0192	89.272	tetraodon_nigroviridis	ENSTNIP00000018432	95.3846	89.6154
ENSG00000132646	homo_sapiens	ENSP00000368438	96.1686	90.8046	paramormyrops_kingsleyae	ENSPKIP00000013621	96.5385	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	paramormyrops_kingsleyae	ENSPKIP00000000082	96.1538	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.7854	90.8046	scleropages_formosus	ENSSFOP00015020088	96.1538	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	89.6552	scleropages_formosus	ENSSFOP00015031301	95.7692	90
ENSG00000132646	homo_sapiens	ENSP00000368438	96.9349	89.6552	leptobrachium_leishanense	ENSLLEP00000010191	96.9349	89.6552
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	scophthalmus_maximus	ENSSMAP00000043610	95.7692	91.1538
ENSG00000132646	homo_sapiens	ENSP00000368438	95.4023	90.8046	oryzias_melastigma	ENSOMEP00000032797	95.7692	91.1538

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0000122	involved_in negative regulation of transcription by RNA polymerase II	1	IEA	Homo_sapiens(9606)	Process
GO:0000307	part_of cyclin-dependent protein kinase holoenzyme complex	1	IEA	Homo_sapiens(9606)	Component
GO:0000701	enables purine-specific mismatch base pair DNA N-glycosylase activity	1	IDA	Homo_sapiens(9606)	Function
GO:0000781	located_in chromosome, telomeric region	1	HDA	Homo_sapiens(9606)	Component
GO:0000785	part_of chromatin	1	IDA	Homo_sapiens(9606)	Component
GO:0001673	located_in male germ cell nucleus	1	IEA	Homo_sapiens(9606)	Component
GO:0003682	enables chromatin binding	1	IDA	Homo_sapiens(9606)	Function
GO:0003684	enables damaged DNA binding	1	IDA	Homo_sapiens(9606)	Function
GO:0005515	enables protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0005634	located_in nucleus	1	IDA	Homo_sapiens(9606)	Component
GO:0005652	located_in nuclear lamina	1	IEA	Homo_sapiens(9606)	Component
GO:0005654	located_in nucleoplasm	2	IDA,TAS	Homo_sapiens(9606)	Component
GO:0005657	located_in replication fork	1	IDA	Homo_sapiens(9606)	Component
GO:0005813	located_in centrosome	1	IDA	Homo_sapiens(9606)	Component
GO:0006272	involved_in leading strand elongation	1	IBA	Homo_sapiens(9606)	Process
GO:0006287	involved_in base-excision repair, gap-filling	1	IEA	Homo_sapiens(9606)	Process
GO:0006298	involved_in mismatch repair	2	IBA,IDA	Homo_sapiens(9606)	Process
GO:0007507	involved_in heart development	1	IEA	Homo_sapiens(9606)	Process
GO:0016604	located_in nuclear body	1	IDA	Homo_sapiens(9606)	Component
GO:0019899	enables enzyme binding	1	IPI	Homo_sapiens(9606)	Function
GO:0019985	involved_in translesion synthesis	2	IBA,IDA	Homo_sapiens(9606)	Process
GO:0030331	enables nuclear estrogen receptor binding	1	IEA	Homo_sapiens(9606)	Function
GO:0030337	enables DNA polymerase processivity factor activity	1	IBA	Homo_sapiens(9606)	Function
GO:0030855	involved_in epithelial cell differentiation	1	IEP	Homo_sapiens(9606)	Process
GO:0030894	part_of replisome	1	TAS	Homo_sapiens(9606)	Component
GO:0030971	enables receptor tyrosine kinase binding	1	IPI	Homo_sapiens(9606)	Function
GO:0031297	involved_in replication fork processing	1	ISS	Homo_sapiens(9606)	Process
GO:0032077	involved_in positive regulation of deoxyribonuclease activity	1	IDA	Homo_sapiens(9606)	Process
GO:0032139	enables dinucleotide insertion or deletion binding	1	IDA	Homo_sapiens(9606)	Function
GO:0032355	involved_in response to estradiol	1	IEA	Homo_sapiens(9606)	Process
GO:0032405	enables MutLalpha complex binding	1	IDA	Homo_sapiens(9606)	Function
GO:0034644	involved_in cellular response to UV	1	IDA	Homo_sapiens(9606)	Process
GO:0035035	enables histone acetyltransferase binding	1	IPI	Homo_sapiens(9606)	Function
GO:0042802	enables identical protein binding	1	IPI	Homo_sapiens(9606)	Function
GO:0043596	located_in nuclear replication fork	1	IDA	Homo_sapiens(9606)	Component
GO:0043626	part_of PCNA complex	3	IBA,IDA,IPI	Homo_sapiens(9606)	Component
GO:0044849	involved_in estrous cycle	1	IEA	Homo_sapiens(9606)	Process
GO:0044877	enables protein-containing complex binding	1	IDA	Homo_sapiens(9606)	Function
GO:0045739	involved_in positive regulation of DNA repair	1	IMP	Homo_sapiens(9606)	Process
GO:0045740	involved_in positive regulation of DNA replication	1	IMP	Homo_sapiens(9606)	Process
GO:0046686	involved_in response to cadmium ion	1	IEA	Homo_sapiens(9606)	Process
GO:0070062	located_in extracellular exosome	1	HDA	Homo_sapiens(9606)	Component
GO:0070182	enables DNA polymerase binding	1	IPI	Homo_sapiens(9606)	Function
GO:0070301	involved_in cellular response to hydrogen peroxide	1	IEA	Homo_sapiens(9606)	Process
GO:0070557	part_of PCNA-p21 complex	1	IDA	Homo_sapiens(9606)	Component
GO:0071466	involved_in cellular response to xenobiotic stimulus	1	IEA	Homo_sapiens(9606)	Process
GO:0071548	involved_in response to dexamethasone	1	IEA	Homo_sapiens(9606)	Process
GO:0097421	involved_in liver regeneration	1	IEA	Homo_sapiens(9606)	Process
GO:1900264	involved_in positive regulation of DNA-directed DNA polymerase activity	1	IMP	Homo_sapiens(9606)	Process
GO:1902065	involved_in response to L-glutamate	1	IEA	Homo_sapiens(9606)	Process
GO:1902990	involved_in mitotic telomere maintenance via semi-conservative replication	1	ISS	Homo_sapiens(9606)	Process

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression